RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 CLEC5AQ9NY25 188 aa16.94■□□□□ 0.3
PDLIM2-203ENST00000339162 TP53TG3Q9ULZ0 132 aa16.94■□□□□ 0.3
PDLIM2-203ENST00000339162 ARMS2P0C7Q2 107 aa16.93■□□□□ 0.3
PDLIM2-203ENST00000339162 Q6ZQT7 251 aa16.93■□□□□ 0.3
PDLIM2-203ENST00000339162 MUC21A0A0G2JKD1 596 aa16.93■□□□□ 0.3
PDLIM2-203ENST00000339162 MUC21A0A140T8X8 626 aa16.93■□□□□ 0.3
PDLIM2-203ENST00000339162 J3KRW8 73 aa16.93■□□□□ 0.3
PDLIM2-203ENST00000339162 ORM1P02763 201 aa16.93■□□□□ 0.3
PDLIM2-203ENST00000339162 SRIP30626 198 aa16.93■□□□□ 0.3
PDLIM2-203ENST00000339162 FOXA3P55318 350 aaPredicted RBP16.93■□□□□ 0.3
PDLIM2-203ENST00000339162 MUC21Q5SSG8 566 aa16.93■□□□□ 0.3
PDLIM2-203ENST00000339162 REC114Q7Z4M0 266 aa16.93■□□□□ 0.3
PDLIM2-203ENST00000339162 A8MWP6 167 aa16.92■□□□□ 0.3
PDLIM2-203ENST00000339162 LY6G6DO95868 133 aa16.92■□□□□ 0.3
PDLIM2-203ENST00000339162 BMI1P35226 326 aa16.92■□□□□ 0.3
PDLIM2-203ENST00000339162 DCANP1Q8TF63 244 aa16.92■□□□□ 0.3
PDLIM2-203ENST00000339162 FABP5P3A8MUU1 101 aa16.92■□□□□ 0.3
PDLIM2-203ENST00000339162 KLHL30-AS1Q8NEE0 82 aa16.92■□□□□ 0.3
PDLIM2-203ENST00000339162 LGALS9O00182 355 aa16.91■□□□□ 0.3
PDLIM2-203ENST00000339162 KLF5Q13887 457 aaPredicted RBP16.91■□□□□ 0.3
PDLIM2-203ENST00000339162 ZNF575Q86XF7 245 aa16.91■□□□□ 0.3
PDLIM2-203ENST00000339162 MS4A6AQ9H2W1 248 aa16.91■□□□□ 0.3
PDLIM2-203ENST00000339162 C2orf70A6NJV1 201 aa16.9■□□□□ 0.3
PDLIM2-203ENST00000339162 AMBPP02760 352 aa16.9■□□□□ 0.3
PDLIM2-203ENST00000339162 HIST1H1AQ02539 215 aaPredicted RBP16.9■□□□□ 0.3
PDLIM2-203ENST00000339162 OR10J6PQ8NGY7 276 aa16.9■□□□□ 0.3
PDLIM2-203ENST00000339162 DEFA6Q01524 100 aa16.9■□□□□ 0.3
PDLIM2-203ENST00000339162 LYZL1Q6UWQ5 148 aa16.9■□□□□ 0.3
PDLIM2-203ENST00000339162 C4orf3Q8WVX3 66 aa16.9■□□□□ 0.3
PDLIM2-203ENST00000339162 A0A1B0GUT8 65 aa16.89■□□□□ 0.29
PDLIM2-203ENST00000339162 LINC01619G3V211 115 aa16.89■□□□□ 0.29
PDLIM2-203ENST00000339162 LINC00310P59036 64 aa16.89■□□□□ 0.29
PDLIM2-203ENST00000339162 PRR9Q5T870 116 aa16.89■□□□□ 0.29
PDLIM2-203ENST00000339162 BAGE3Q86Y29 109 aa16.89■□□□□ 0.29
PDLIM2-203ENST00000339162 OVOL1O14753 267 aa16.89■□□□□ 0.29
PDLIM2-203ENST00000339162 RNASE1P07998 156 aaKnown RBP16.89■□□□□ 0.29
PDLIM2-203ENST00000339162 ADAMTSL5Q6ZMM2 481 aa16.89■□□□□ 0.29
PDLIM2-203ENST00000339162 OR1N2Q8NGR9 330 aa16.89■□□□□ 0.29
PDLIM2-203ENST00000339162 DPF1Q92782 380 aa16.89■□□□□ 0.29
PDLIM2-203ENST00000339162 C11orf21Q9P2W6 132 aa16.89■□□□□ 0.29
PDLIM2-203ENST00000339162 A0A1W2PRX2 142 aa16.88■□□□□ 0.29
PDLIM2-203ENST00000339162 HAX1O00165 279 aa16.88■□□□□ 0.29
PDLIM2-203ENST00000339162 PKIAP61925 76 aa16.88■□□□□ 0.29
PDLIM2-203ENST00000339162 SERF1AO75920 110 aa16.88■□□□□ 0.29
PDLIM2-203ENST00000339162 OR8A1Q8NGG7 326 aa16.88■□□□□ 0.29
PDLIM2-203ENST00000339162 ZNF418Q8TF45 676 aaPredicted RBP16.88■□□□□ 0.29
PDLIM2-203ENST00000339162 ZNF688P0C7X2 276 aa16.87■□□□□ 0.29
PDLIM2-203ENST00000339162 CD28P10747 220 aa16.87■□□□□ 0.29
PDLIM2-203ENST00000339162 JOSD1Q15040 202 aaPredicted RBP16.87■□□□□ 0.29
PDLIM2-203ENST00000339162 LINC01006Q8NI28 216 aa16.87■□□□□ 0.29
PDLIM2-203ENST00000339162 SCGB2A2Q13296 93 aa16.86■□□□□ 0.29
PDLIM2-203ENST00000339162 IQCJQ1A5X6 159 aa16.86■□□□□ 0.29
PDLIM2-203ENST00000339162 LINC00477Q96M19 166 aa16.86■□□□□ 0.29
PDLIM2-203ENST00000339162 RCHY1Q96PM5 261 aa16.86■□□□□ 0.29
PDLIM2-203ENST00000339162 IGKV3D-20A0A0C4DH25 116 aa16.85■□□□□ 0.29
PDLIM2-203ENST00000339162 CD33P20138 364 aa16.85■□□□□ 0.29
PDLIM2-203ENST00000339162 ID1P41134 155 aa16.85■□□□□ 0.29
PDLIM2-203ENST00000339162 HILS1P60008 231 aa16.85■□□□□ 0.29
PDLIM2-203ENST00000339162 Q0VG73 95 aa16.85■□□□□ 0.29
PDLIM2-203ENST00000339162 KIR3DS1Q14943 382 aa16.85■□□□□ 0.29
PDLIM2-203ENST00000339162 WFDC12Q8WWY7 111 aa16.85■□□□□ 0.29
PDLIM2-203ENST00000339162 DLX4Q92988 240 aaPredicted RBP16.85■□□□□ 0.29
PDLIM2-203ENST00000339162 TMEM160Q9NX00 188 aa16.85■□□□□ 0.29
PDLIM2-203ENST00000339162 PPP1R14DQ9NXH3 145 aa16.85■□□□□ 0.29
PDLIM2-203ENST00000339162 RIGQ13278 110 aa16.85■□□□□ 0.29
PDLIM2-203ENST00000339162 PSMG4Q5JS54 123 aa16.85■□□□□ 0.29
PDLIM2-203ENST00000339162 Q6AWC8 147 aa16.85■□□□□ 0.29
PDLIM2-203ENST00000339162 TSTD3H0UI37 97 aa16.84■□□□□ 0.29
PDLIM2-203ENST00000339162 FER1L6-AS1Q8NA97 138 aa16.84■□□□□ 0.29
PDLIM2-203ENST00000339162 C14orf144Q96I85 54 aa16.84■□□□□ 0.29
PDLIM2-203ENST00000339162 SORL1Q92673 2214 aa16.84■□□□□ 0.29
PDLIM2-203ENST00000339162 LINC01559Q495D7 138 aa16.84■□□□□ 0.29
PDLIM2-203ENST00000339162 ZFAND2AQ8N6M9 145 aa16.84■□□□□ 0.29
PDLIM2-203ENST00000339162 BORCS7Q96B45 105 aa16.84■□□□□ 0.29
PDLIM2-203ENST00000339162 ALKBH7Q9BT30 221 aaPredicted RBP16.84■□□□□ 0.29
PDLIM2-203ENST00000339162 SRSF2Q01130 221 aaKnown RBP16.83■□□□□ 0.28
PDLIM2-203ENST00000339162 C18orf32Q8TCD1 76 aa16.83■□□□□ 0.28
PDLIM2-203ENST00000339162 DDTP30046 118 aa16.82■□□□□ 0.28
PDLIM2-203ENST00000339162 RPS20P60866 119 aaKnown RBP16.82■□□□□ 0.28
PDLIM2-203ENST00000339162 OR9G4Q8NGQ1 327 aa16.82■□□□□ 0.28
PDLIM2-203ENST00000339162 TMEM18Q96B42 140 aa16.82■□□□□ 0.28
PDLIM2-203ENST00000339162 K7EQG2 157 aa16.82■□□□□ 0.28
PDLIM2-203ENST00000339162 M0QZ24 198 aa16.82■□□□□ 0.28
PDLIM2-203ENST00000339162 IGLC6P0CF74 106 aa16.82■□□□□ 0.28
PDLIM2-203ENST00000339162 OR10J3Q5JRS4 329 aa16.82■□□□□ 0.28
PDLIM2-203ENST00000339162 CITED2Q99967 270 aaPredicted RBP16.82■□□□□ 0.28
PDLIM2-203ENST00000339162 SETXQ7Z333 2677 aaKnown RBP16.81■□□□□ 0.28
PDLIM2-203ENST00000339162 RAX2Q96IS3 184 aa16.81■□□□□ 0.28
PDLIM2-203ENST00000339162 LENEPQ9Y5L5 61 aa16.81■□□□□ 0.28
PDLIM2-203ENST00000339162 NAGKQ9UJ70 344 aa16.81■□□□□ 0.28
PDLIM2-203ENST00000339162 WNK1Q9H4A3 2382 aa16.8■□□□□ 0.28
PDLIM2-203ENST00000339162 INAFM1C9JVW0 142 aa16.8■□□□□ 0.28
PDLIM2-203ENST00000339162 GPX1P07203 203 aa16.8■□□□□ 0.28
PDLIM2-203ENST00000339162 HIVEP1P15822 2718 aa16.8■□□□□ 0.28
PDLIM2-203ENST00000339162 LOC102724200A0A096LPH7 203 aaPredicted RBP16.8■□□□□ 0.28
PDLIM2-203ENST00000339162 NTF3P20783 257 aa16.8■□□□□ 0.28
PDLIM2-203ENST00000339162 RNASE4P34096 147 aaKnown RBP16.8■□□□□ 0.28
PDLIM2-203ENST00000339162 SNRPD3P62318 126 aaKnown RBP16.8■□□□□ 0.28
PDLIM2-203ENST00000339162 C16orf95Q9H693 158 aa16.8■□□□□ 0.28
PDLIM2-203ENST00000339162 MSRB1Q9NZV6 116 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms