RNA–Protein interactions for RNA: ENST00000338508.8

SHANK2-201, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 7,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-201ENST00000338508 DENND4AQ7Z401 1863 aa9.41□□□□□ -0.9
SHANK2-201ENST00000338508 C15orf53Q8NAA6 179 aa9.41□□□□□ -0.9
SHANK2-201ENST00000338508 FLVCR1-AS1Q8TAF5 88 aa9.41□□□□□ -0.9
SHANK2-201ENST00000338508 U3KQE9 123 aa9.41□□□□□ -0.9
SHANK2-201ENST00000338508 MPZP25189 248 aa9.41□□□□□ -0.9
SHANK2-201ENST00000338508 IGHV2-70DA0A0C4DH43 119 aa9.41□□□□□ -0.9
SHANK2-201ENST00000338508 F8W735 103 aaPredicted RBP9.41□□□□□ -0.9
SHANK2-201ENST00000338508 CCL24O00175 119 aa9.41□□□□□ -0.9
SHANK2-201ENST00000338508 GATA3P23771 443 aa9.41□□□□□ -0.9
SHANK2-201ENST00000338508 F6UB75 175 aa9.41□□□□□ -0.9
SHANK2-201ENST00000338508 UBE2V1Q13404 147 aa9.41□□□□□ -0.9
SHANK2-201ENST00000338508 FBLN5Q9UBX5 448 aa9.41□□□□□ -0.9
SHANK2-201ENST00000338508 LRCOL1A6NCL2 159 aa9.41□□□□□ -0.9
SHANK2-201ENST00000338508 UBE2AP49459 152 aa9.4□□□□□ -0.9
SHANK2-201ENST00000338508 CYYR1Q96J86 154 aa9.4□□□□□ -0.9
SHANK2-201ENST00000338508 IFITM1P13164 125 aa9.4□□□□□ -0.9
SHANK2-201ENST00000338508 WDR86Q86TI4 376 aa9.4□□□□□ -0.9
SHANK2-201ENST00000338508 TSSC4Q9Y5U2 329 aaPredicted RBP9.4□□□□□ -0.9
SHANK2-201ENST00000338508 TRAV13-2A0A0B4J235 113 aa9.4□□□□□ -0.9
SHANK2-201ENST00000338508 A8MWP6 167 aa9.4□□□□□ -0.9
SHANK2-201ENST00000338508 GNRH2O43555 120 aa9.4□□□□□ -0.9
SHANK2-201ENST00000338508 SEM1Q6ZVN7 128 aa9.4□□□□□ -0.9
SHANK2-201ENST00000338508 NMSQ5H8A3 153 aa9.4□□□□□ -0.91
SHANK2-201ENST00000338508 TMEM14EPQ6UXP3 125 aa9.4□□□□□ -0.91
SHANK2-201ENST00000338508 DLEU1O43261 78 aa9.4□□□□□ -0.91
SHANK2-201ENST00000338508 REG4Q9BYZ8 158 aa9.4□□□□□ -0.91
SHANK2-201ENST00000338508 TPSG1Q9NRR2 321 aa9.4□□□□□ -0.91
SHANK2-201ENST00000338508 DEFB4AO15263 64 aa9.39□□□□□ -0.91
SHANK2-201ENST00000338508 SVIPQ8NHG7 77 aa9.39□□□□□ -0.91
SHANK2-201ENST00000338508 ADAMTS7Q9UKP4 1686 aa9.39□□□□□ -0.91
SHANK2-201ENST00000338508 PIFOQ8TCI5 191 aa9.39□□□□□ -0.91
SHANK2-201ENST00000338508 FAM104BQ5XKR9 115 aa9.39□□□□□ -0.91
SHANK2-201ENST00000338508 RNF183Q96D59 192 aa9.39□□□□□ -0.91
SHANK2-201ENST00000338508 LRRC37AA6NMS7 1700 aa9.39□□□□□ -0.91
SHANK2-201ENST00000338508 LYPD3O95274 346 aa9.39□□□□□ -0.91
SHANK2-201ENST00000338508 PNRC2Q9NPJ4 139 aaKnown RBP9.39□□□□□ -0.91
SHANK2-201ENST00000338508 TRBV24-1A0A075B6N3 115 aa9.39□□□□□ -0.91
SHANK2-201ENST00000338508 ZNF134P52741 427 aa9.39□□□□□ -0.91
SHANK2-201ENST00000338508 MED13Q9UHV7 2174 aa9.39□□□□□ -0.91
SHANK2-201ENST00000338508 Q8N8P6 123 aa9.38□□□□□ -0.91
SHANK2-201ENST00000338508 CAMK2N2Q96S95 79 aa9.38□□□□□ -0.91
SHANK2-201ENST00000338508 HLA-DMBP28068 263 aa9.38□□□□□ -0.91
SHANK2-201ENST00000338508 NPBQ8NG41 125 aa9.38□□□□□ -0.91
SHANK2-201ENST00000338508 COLCA2A8K830 154 aa9.38□□□□□ -0.91
SHANK2-201ENST00000338508 K7ENP7 123 aa9.38□□□□□ -0.91
SHANK2-201ENST00000338508 CCL18P55774 89 aa9.38□□□□□ -0.91
SHANK2-201ENST00000338508 C9orf47Q6ZRZ4 202 aa9.38□□□□□ -0.91
SHANK2-201ENST00000338508 PRSS46E5RG02 174 aa9.38□□□□□ -0.91
SHANK2-201ENST00000338508 RLFQ13129 1914 aa9.38□□□□□ -0.91
SHANK2-201ENST00000338508 SLURP1P55000 103 aa9.38□□□□□ -0.91
SHANK2-201ENST00000338508 TMEM258P61165 79 aa9.38□□□□□ -0.91
SHANK2-201ENST00000338508 Q6ZRM9 215 aa9.38□□□□□ -0.91
SHANK2-201ENST00000338508 TRAV4A0A0B4J268 109 aa9.37□□□□□ -0.91
SHANK2-201ENST00000338508 FGF16O43320 207 aa9.37□□□□□ -0.91
SHANK2-201ENST00000338508 IGHV4-59P01825 116 aa9.37□□□□□ -0.91
SHANK2-201ENST00000338508 IGHG2P01859 326 aa9.37□□□□□ -0.91
SHANK2-201ENST00000338508 HERVK_113P63121 156 aa9.37□□□□□ -0.91
SHANK2-201ENST00000338508 COX7B2Q8TF08 81 aa9.37□□□□□ -0.91
SHANK2-201ENST00000338508 WIPF2Q8TF74 440 aaPredicted RBP9.37□□□□□ -0.91
SHANK2-201ENST00000338508 CYTL1Q9NRR1 136 aa9.37□□□□□ -0.91
SHANK2-201ENST00000338508 GYPEP15421 78 aa9.37□□□□□ -0.91
SHANK2-201ENST00000338508 Q6ZS92 163 aa9.37□□□□□ -0.91
SHANK2-201ENST00000338508 PDE6HQ13956 83 aa9.37□□□□□ -0.91
SHANK2-201ENST00000338508 ANKRD29Q8N6D5 301 aa9.37□□□□□ -0.91
SHANK2-201ENST00000338508 WFDC11Q8NEX6 87 aa9.37□□□□□ -0.91
SHANK2-201ENST00000338508 NCR3O14931 201 aa9.37□□□□□ -0.91
SHANK2-201ENST00000338508 WDR81Q562E7 1941 aa9.37□□□□□ -0.91
SHANK2-201ENST00000338508 SLAQ13239 276 aa9.37□□□□□ -0.91
SHANK2-201ENST00000338508 ZNF664Q8N3J9 261 aa9.37□□□□□ -0.91
SHANK2-201ENST00000338508 MRPL35Q9NZE8 188 aaKnown RBP9.37□□□□□ -0.91
SHANK2-201ENST00000338508 MRPL27Q9P0M9 148 aaKnown RBP9.37□□□□□ -0.91
SHANK2-201ENST00000338508 FANCD2OSQ96PS1 177 aa9.36□□□□□ -0.91
SHANK2-201ENST00000338508 DIAPH2-AS1Q14236 149 aa9.36□□□□□ -0.91
SHANK2-201ENST00000338508 J3QRE1 110 aa9.36□□□□□ -0.91
SHANK2-201ENST00000338508 LMO1P25800 156 aa9.36□□□□□ -0.91
SHANK2-201ENST00000338508 TNRC6BQ9UPQ9 1833 aaKnown RBP9.36□□□□□ -0.91
SHANK2-201ENST00000338508 H3BMG7 143 aa9.36□□□□□ -0.91
SHANK2-201ENST00000338508 DEFB112Q30KQ8 113 aa9.36□□□□□ -0.91
SHANK2-201ENST00000338508 MRPL53Q96EL3 112 aaKnown RBP9.36□□□□□ -0.91
SHANK2-201ENST00000338508 TM2D2Q9BX73 214 aa9.36□□□□□ -0.91
SHANK2-201ENST00000338508 PRO1854Q9UHT4 67 aa9.36□□□□□ -0.91
SHANK2-201ENST00000338508 NDUFA4O00483 81 aa9.36□□□□□ -0.91
SHANK2-201ENST00000338508 UTF1Q5T230 341 aa9.36□□□□□ -0.91
SHANK2-201ENST00000338508 Q9H8V8 135 aa9.36□□□□□ -0.91
SHANK2-201ENST00000338508 K7EMI3 77 aa9.36□□□□□ -0.91
SHANK2-201ENST00000338508 CEND1Q8N111 149 aa9.36□□□□□ -0.91
SHANK2-201ENST00000338508 BAALC-AS2P0C853 105 aa9.35□□□□□ -0.91
SHANK2-201ENST00000338508 RHOHQ15669 191 aa9.35□□□□□ -0.91
SHANK2-201ENST00000338508 WNK1Q9H4A3 2382 aa9.35□□□□□ -0.91
SHANK2-201ENST00000338508 IGHV4OR15-8A0A075B7B6 117 aa9.35□□□□□ -0.91
SHANK2-201ENST00000338508 A0A087WW49 117 aa9.35□□□□□ -0.91
SHANK2-201ENST00000338508 ETDBQ3ZM63 59 aa9.35□□□□□ -0.91
SHANK2-201ENST00000338508 TRBV20-1A0A075B6N2 111 aa9.35□□□□□ -0.91
SHANK2-201ENST00000338508 FUSP35637 526 aaKnown RBP eCLIP9.35□□□□□ -0.911e-6■■■□□ 17.1
SHANK2-201ENST00000338508 FOXE3Q13461 319 aa9.35□□□□□ -0.91
SHANK2-201ENST00000338508 GFRA4Q9GZZ7 299 aa9.35□□□□□ -0.91
SHANK2-201ENST00000338508 NDUFS7O75251 213 aa9.34□□□□□ -0.91
SHANK2-201ENST00000338508 CT83Q5H943 113 aa9.34□□□□□ -0.91
SHANK2-201ENST00000338508 LHFPL1Q86WI0 220 aa9.34□□□□□ -0.91
SHANK2-201ENST00000338508 ORMDL1Q9P0S3 153 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms