RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 Q96MF0 132 aa4.93□□□□□ -1.62
PRKDC-202ENST00000338368 LINC01587Q99440 93 aa4.93□□□□□ -1.62
PRKDC-202ENST00000338368 NDUFA4O00483 81 aa4.93□□□□□ -1.62
PRKDC-202ENST00000338368 ORAOV1Q8WV07 137 aa4.93□□□□□ -1.62
PRKDC-202ENST00000338368 GAGE10A6NGK3 116 aa4.93□□□□□ -1.62
PRKDC-202ENST00000338368 IGHV4-59P01825 116 aa4.93□□□□□ -1.62
PRKDC-202ENST00000338368 APOC4P55056 127 aa4.93□□□□□ -1.62
PRKDC-202ENST00000338368 LMO4P61968 165 aa4.93□□□□□ -1.62
PRKDC-202ENST00000338368 TMEM170BQ5T4T1 132 aa4.93□□□□□ -1.62
PRKDC-202ENST00000338368 FAM104BQ5XKR9 115 aa4.93□□□□□ -1.62
PRKDC-202ENST00000338368 FSTL3O95633 263 aa4.93□□□□□ -1.62
PRKDC-202ENST00000338368 IGHV4-38-2P0DP08 117 aa4.93□□□□□ -1.62
PRKDC-202ENST00000338368 IGKV1D-37A0A075B6S9 117 aa4.93□□□□□ -1.62
PRKDC-202ENST00000338368 SYS1-DBNDD2H3BUS1 97 aa4.93□□□□□ -1.62
PRKDC-202ENST00000338368 C8orf86Q6ZUL3 223 aa4.93□□□□□ -1.62
PRKDC-202ENST00000338368 IL17RELQ6ZVW7 336 aa4.93□□□□□ -1.62
PRKDC-202ENST00000338368 SRSF2Q01130 221 aaKnown RBP4.93□□□□□ -1.62
PRKDC-202ENST00000338368 DYNAPQ8N1N2 210 aa4.92□□□□□ -1.62
PRKDC-202ENST00000338368 ZNF124Q15973 351 aa4.92□□□□□ -1.62
PRKDC-202ENST00000338368 USP9XQ93008 2570 aaPredicted RBP4.92□□□□□ -1.62
PRKDC-202ENST00000338368 POLR3KQ9Y2Y1 108 aaPredicted RBP4.92□□□□□ -1.62
PRKDC-202ENST00000338368 NRGNQ92686 78 aa4.92□□□□□ -1.62
PRKDC-202ENST00000338368 DOPEY1Q5JWR5 2465 aa4.92□□□□□ -1.62
PRKDC-202ENST00000338368 C11orf71Q6IPW1 123 aa4.92□□□□□ -1.62
PRKDC-202ENST00000338368 Q6ZWC4 215 aa4.92□□□□□ -1.62
PRKDC-202ENST00000338368 IGF2BP2-AS1Q96M15 143 aa4.92□□□□□ -1.62
PRKDC-202ENST00000338368 PRSS2P07478 247 aa4.92□□□□□ -1.62
PRKDC-202ENST00000338368 SEC11AP67812 179 aa4.92□□□□□ -1.62
PRKDC-202ENST00000338368 CYSLTR1Q9Y271 337 aa4.92□□□□□ -1.62
PRKDC-202ENST00000338368 TMEM262E9PQX1 116 aa4.92□□□□□ -1.62
PRKDC-202ENST00000338368 SMPXQ9UHP9 88 aa4.92□□□□□ -1.62
PRKDC-202ENST00000338368 KLHL30-AS1Q8NEE0 82 aa4.91□□□□□ -1.62
PRKDC-202ENST00000338368 TMEM158Q8WZ71 300 aa4.91□□□□□ -1.62
PRKDC-202ENST00000338368 PRORYQ9H606 182 aa4.91□□□□□ -1.62
PRKDC-202ENST00000338368 CDSNQ15517 529 aa4.91□□□□□ -1.62
PRKDC-202ENST00000338368 ODF3BA8MYP8 253 aa4.91□□□□□ -1.62
PRKDC-202ENST00000338368 TNFRSF6BO95407 300 aa4.91□□□□□ -1.62
PRKDC-202ENST00000338368 TRGV11A0A075B6L2 103 aa4.91□□□□□ -1.62
PRKDC-202ENST00000338368 NUPR1O60356 82 aa4.91□□□□□ -1.62
PRKDC-202ENST00000338368 ANXA2RQ3ZCQ2 193 aa4.91□□□□□ -1.62
PRKDC-202ENST00000338368 OR2K2Q8NGT1 345 aa4.91□□□□□ -1.62
PRKDC-202ENST00000338368 DPM2O94777 84 aa4.91□□□□□ -1.62
PRKDC-202ENST00000338368 EGR2P11161 476 aaPredicted RBP4.91□□□□□ -1.62
PRKDC-202ENST00000338368 LGALS3P17931 250 aaKnown RBP4.91□□□□□ -1.62
PRKDC-202ENST00000338368 DEFB131AP59861 70 aa4.91□□□□□ -1.62
PRKDC-202ENST00000338368 C14orf178Q8N769 122 aaPredicted RBP4.91□□□□□ -1.62
PRKDC-202ENST00000338368 IFI27P40305 119 aaPredicted RBP4.91□□□□□ -1.62
PRKDC-202ENST00000338368 PSMB2P49721 201 aa4.91□□□□□ -1.62
PRKDC-202ENST00000338368 RCHY1Q96PM5 261 aa4.91□□□□□ -1.62
PRKDC-202ENST00000338368 MS4A6AQ9H2W1 248 aa4.91□□□□□ -1.62
PRKDC-202ENST00000338368 SLC25A20O43772 301 aa4.91□□□□□ -1.62
PRKDC-202ENST00000338368 IGKCP01834 107 aa4.91□□□□□ -1.62
PRKDC-202ENST00000338368 FRMD6-AS1P0C7T7 363 aa4.91□□□□□ -1.62
PRKDC-202ENST00000338368 SH2D6Q7Z4S9 175 aa4.91□□□□□ -1.62
PRKDC-202ENST00000338368 C5orf56Q8N8D9 126 aa4.91□□□□□ -1.62
PRKDC-202ENST00000338368 WIPF2Q8TF74 440 aaPredicted RBP4.91□□□□□ -1.62
PRKDC-202ENST00000338368 AJUBAQ96IF1 538 aa4.91□□□□□ -1.62
PRKDC-202ENST00000338368 H3BRM9 83 aa4.91□□□□□ -1.62
PRKDC-202ENST00000338368 ELANEP08246 267 aa4.9□□□□□ -1.62
PRKDC-202ENST00000338368 F8P00451 2351 aa4.9□□□□□ -1.62
PRKDC-202ENST00000338368 H3BUA1 57 aa4.9□□□□□ -1.62
PRKDC-202ENST00000338368 BUB3O43684 328 aa4.9□□□□□ -1.62
PRKDC-202ENST00000338368 IGHV7-4-1A0A0J9YVY3 117 aa4.9□□□□□ -1.62
PRKDC-202ENST00000338368 LY6LH3BQJ8 138 aa4.9□□□□□ -1.62
PRKDC-202ENST00000338368 SMIM13P0DJ93 91 aa4.9□□□□□ -1.62
PRKDC-202ENST00000338368 MRPL51Q4U2R6 128 aaKnown RBP4.9□□□□□ -1.62
PRKDC-202ENST00000338368 TRGV2A0A075B6R0 118 aa4.9□□□□□ -1.62
PRKDC-202ENST00000338368 TNFRSF13BO14836 293 aaPredicted RBP4.9□□□□□ -1.62
PRKDC-202ENST00000338368 HOXA3O43365 443 aaPredicted RBP4.9□□□□□ -1.62
PRKDC-202ENST00000338368 DEFB113Q30KQ7 82 aa4.9□□□□□ -1.62
PRKDC-202ENST00000338368 ZNF876PQ49A33 203 aa4.9□□□□□ -1.62
PRKDC-202ENST00000338368 DEFB104AQ8WTQ1 72 aa4.9□□□□□ -1.62
PRKDC-202ENST00000338368 LAGE3Q14657 143 aa4.9□□□□□ -1.63
PRKDC-202ENST00000338368 DPH3Q96FX2 82 aa4.9□□□□□ -1.63
PRKDC-202ENST00000338368 hDV102S1A0JD36 115 aa4.9□□□□□ -1.63
PRKDC-202ENST00000338368 SFTA2Q6UW10 78 aa4.9□□□□□ -1.63
PRKDC-202ENST00000338368 MPV17L2Q567V2 206 aa4.9□□□□□ -1.63
PRKDC-202ENST00000338368 C20orf144Q9BQM9 153 aa4.9□□□□□ -1.63
PRKDC-202ENST00000338368 GEMIN7Q9H840 131 aaKnown RBP4.9□□□□□ -1.63
PRKDC-202ENST00000338368 F6UB75 175 aa4.9□□□□□ -1.63
PRKDC-202ENST00000338368 SAP30O75446 220 aa4.9□□□□□ -1.63
PRKDC-202ENST00000338368 FN1P02751 2386 aaKnown RBP4.89□□□□□ -1.63
PRKDC-202ENST00000338368 CRPP02741 224 aa4.89□□□□□ -1.63
PRKDC-202ENST00000338368 SPINK13Q1W4C9 94 aa4.89□□□□□ -1.63
PRKDC-202ENST00000338368 CDPF1Q6NVV7 123 aa4.89□□□□□ -1.63
PRKDC-202ENST00000338368 IGHG2P01859 326 aa4.89□□□□□ -1.63
PRKDC-202ENST00000338368 IGLC2P0DOY2 106 aa4.89□□□□□ -1.63
PRKDC-202ENST00000338368 IGLC3P0DOY3 106 aa4.89□□□□□ -1.63
PRKDC-202ENST00000338368 LINC01619G3V211 115 aa4.89□□□□□ -1.63
PRKDC-202ENST00000338368 DNAL4O96015 105 aa4.89□□□□□ -1.63
PRKDC-202ENST00000338368 NSUN5P1Q3KNT7 163 aa4.89□□□□□ -1.63
PRKDC-202ENST00000338368 PRAC2D3DTV9 90 aa4.89□□□□□ -1.63
PRKDC-202ENST00000338368 PRSS57Q6UWY2 283 aa4.89□□□□□ -1.63
PRKDC-202ENST00000338368 CRYGBP07316 175 aa4.89□□□□□ -1.63
PRKDC-202ENST00000338368 SCGB1A1P11684 91 aa4.89□□□□□ -1.63
PRKDC-202ENST00000338368 TCTEX1D4Q5JR98 221 aa4.89□□□□□ -1.63
PRKDC-202ENST00000338368 CHTOPQ9Y3Y2 248 aaKnown RBP4.89□□□□□ -1.63
PRKDC-202ENST00000338368 LOC107984156A0A0G2JMH3 177 aa4.89□□□□□ -1.63
PRKDC-202ENST00000338368 ARL17AQ8IVW1 177 aa4.89□□□□□ -1.63
PRKDC-202ENST00000338368 IGHV1-24A0A0C4DH33 117 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms