RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 X6R8D5 127 aa8.63□□□□□ -1.03
SPTLC1-202ENST00000337841 TMEM189A5PLL7 270 aa8.62□□□□□ -1.03
SPTLC1-202ENST00000337841 RBFOX3A6NFN3 312 aa8.62□□□□□ -1.03
SPTLC1-202ENST00000337841 PDE6DO43924 150 aa8.62□□□□□ -1.03
SPTLC1-202ENST00000337841 IGLV2-11P01706 119 aa8.62□□□□□ -1.03
SPTLC1-202ENST00000337841 BCL2P10415 239 aa8.62□□□□□ -1.03
SPTLC1-202ENST00000337841 HTN1P15515 57 aa8.62□□□□□ -1.03
SPTLC1-202ENST00000337841 RAB14P61106 215 aa8.62□□□□□ -1.03
SPTLC1-202ENST00000337841 MEF2BQ02080 365 aaPredicted RBP8.62□□□□□ -1.03
SPTLC1-202ENST00000337841 PYGO2Q9BRQ0 406 aa8.62□□□□□ -1.03
SPTLC1-202ENST00000337841 IGHV4-28A0A0C4DH34 117 aa8.61□□□□□ -1.03
SPTLC1-202ENST00000337841 A0A0J9YWU9 116 aa8.61□□□□□ -1.03
SPTLC1-202ENST00000337841 TRBV6-1A0A0K0K1D8 114 aa8.61□□□□□ -1.03
SPTLC1-202ENST00000337841 A6NJY4 79 aa8.61□□□□□ -1.03
SPTLC1-202ENST00000337841 ZNF705GA8MUZ8 300 aaPredicted RBP8.61□□□□□ -1.03
SPTLC1-202ENST00000337841 ZNF324O75467 553 aaPredicted RBP8.61□□□□□ -1.03
SPTLC1-202ENST00000337841 BTN1A1Q13410 526 aa8.61□□□□□ -1.03
SPTLC1-202ENST00000337841 TMEM183BQ1AE95 376 aa8.61□□□□□ -1.03
SPTLC1-202ENST00000337841 SMUG1Q53HV7 270 aa8.61□□□□□ -1.03
SPTLC1-202ENST00000337841 TVP23CQ96ET8 276 aa8.61□□□□□ -1.03
SPTLC1-202ENST00000337841 MED9Q9NWA0 146 aa8.61□□□□□ -1.03
SPTLC1-202ENST00000337841 TRAV21A0A0B4J279 112 aa8.6□□□□□ -1.03
SPTLC1-202ENST00000337841 LOC102723971A0A1B0GUV8 181 aa8.6□□□□□ -1.03
SPTLC1-202ENST00000337841 SCO2A0A1W2PP80 73 aa8.6□□□□□ -1.03
SPTLC1-202ENST00000337841 RGS13O14921 159 aa8.6□□□□□ -1.03
SPTLC1-202ENST00000337841 RBMY1A1P0DJD3 496 aaKnown RBP8.6□□□□□ -1.03
SPTLC1-202ENST00000337841 RBMY1CP0DJD4 496 aa8.6□□□□□ -1.03
SPTLC1-202ENST00000337841 RBMY1FQ15415 496 aaKnown RBP8.6□□□□□ -1.03
SPTLC1-202ENST00000337841 ZNF493Q6ZR52 646 aa8.6□□□□□ -1.03
SPTLC1-202ENST00000337841 Q8NAQ8 132 aa8.6□□□□□ -1.03
SPTLC1-202ENST00000337841 IL17DQ8TAD2 202 aa8.6□□□□□ -1.03
SPTLC1-202ENST00000337841 WWC2-AS2Q96NR7 200 aa8.6□□□□□ -1.03
SPTLC1-202ENST00000337841 EIF5A2Q9GZV4 153 aaKnown RBP8.6□□□□□ -1.03
SPTLC1-202ENST00000337841 C11orf68Q9H3H3 251 aaKnown RBP8.6□□□□□ -1.03
SPTLC1-202ENST00000337841 NBEAL2Q6ZNJ1 2754 aa8.59□□□□□ -1.03
SPTLC1-202ENST00000337841 DEFB4AO15263 64 aa8.59□□□□□ -1.03
SPTLC1-202ENST00000337841 EMP1P54849 157 aa8.59□□□□□ -1.03
SPTLC1-202ENST00000337841 ZNF506Q5JVG8 444 aa8.59□□□□□ -1.03
SPTLC1-202ENST00000337841 Q6AWC8 147 aa8.59□□□□□ -1.03
SPTLC1-202ENST00000337841 ZNF767PQ75MW2 155 aa8.59□□□□□ -1.03
SPTLC1-202ENST00000337841 BAGE2Q86Y30 109 aa8.59□□□□□ -1.03
SPTLC1-202ENST00000337841 EIF4E3Q8N5X7 224 aaKnown RBP8.59□□□□□ -1.03
SPTLC1-202ENST00000337841 C2CD4CQ8TF44 421 aa8.59□□□□□ -1.03
SPTLC1-202ENST00000337841 C11orf52Q96A22 123 aa8.59□□□□□ -1.03
SPTLC1-202ENST00000337841 LINC00467Q9BRT7 94 aa8.59□□□□□ -1.03
SPTLC1-202ENST00000337841 EDA2RQ9HAV5 297 aa8.59□□□□□ -1.03
SPTLC1-202ENST00000337841 IGHV1OR15-1A0A075B7D0 117 aa8.58□□□□□ -1.04
SPTLC1-202ENST00000337841 CXorf65A6NEN9 183 aa8.58□□□□□ -1.04
SPTLC1-202ENST00000337841 CBY3A6NI87 242 aa8.58□□□□□ -1.04
SPTLC1-202ENST00000337841 FABP5P3A8MUU1 101 aa8.58□□□□□ -1.04
SPTLC1-202ENST00000337841 GCGP01275 180 aa8.58□□□□□ -1.04
SPTLC1-202ENST00000337841 AZU1P20160 251 aa8.58□□□□□ -1.04
SPTLC1-202ENST00000337841 PRR9Q5T870 116 aa8.58□□□□□ -1.04
SPTLC1-202ENST00000337841 FAM159AQ6UWV7 190 aa8.58□□□□□ -1.04
SPTLC1-202ENST00000337841 Q86TA4 180 aa8.58□□□□□ -1.04
SPTLC1-202ENST00000337841 PCNPQ8WW12 178 aaKnown RBP8.58□□□□□ -1.04
SPTLC1-202ENST00000337841 C16orf74Q96GX8 76 aa8.58□□□□□ -1.04
SPTLC1-202ENST00000337841 FAM210AQ96ND0 272 aa8.58□□□□□ -1.04
SPTLC1-202ENST00000337841 C8orf49Q96NF6 230 aa8.58□□□□□ -1.04
SPTLC1-202ENST00000337841 NDUFS6O75380 124 aaKnown RBP8.57□□□□□ -1.04
SPTLC1-202ENST00000337841 LTAP01374 205 aa8.57□□□□□ -1.04
SPTLC1-202ENST00000337841 PRM2P04554 102 aa8.57□□□□□ -1.04
SPTLC1-202ENST00000337841 PFN1P07737 140 aaKnown RBP8.57□□□□□ -1.04
SPTLC1-202ENST00000337841 SPART-AS1P0CW21 52 aa8.57□□□□□ -1.04
SPTLC1-202ENST00000337841 RPL35P42766 123 aaKnown RBP8.57□□□□□ -1.04
SPTLC1-202ENST00000337841 ANXA2RQ3ZCQ2 193 aa8.57□□□□□ -1.04
SPTLC1-202ENST00000337841 TOR2AQ5JU69 321 aa8.57□□□□□ -1.04
SPTLC1-202ENST00000337841 COX8CQ7Z4L0 72 aa8.57□□□□□ -1.04
SPTLC1-202ENST00000337841 TMEM183AQ8IXX5 376 aa8.57□□□□□ -1.04
SPTLC1-202ENST00000337841 C11orf45Q8TAV5 145 aa8.57□□□□□ -1.04
SPTLC1-202ENST00000337841 KCNS1Q96KK3 526 aa8.57□□□□□ -1.04
SPTLC1-202ENST00000337841 TEX48A0A1B0GUV7 120 aa8.56□□□□□ -1.04
SPTLC1-202ENST00000337841 SNURFLB1AK76 121 aa8.56□□□□□ -1.04
SPTLC1-202ENST00000337841 TMEM250H0YL14 139 aa8.56□□□□□ -1.04
SPTLC1-202ENST00000337841 PEA15Q15121 130 aa8.56□□□□□ -1.04
SPTLC1-202ENST00000337841 MUC21Q5SSG8 566 aa8.56□□□□□ -1.04
SPTLC1-202ENST00000337841 TMEM263Q8WUH6 116 aaKnown RBP8.56□□□□□ -1.04
SPTLC1-202ENST00000337841 NAGKQ9UJ70 344 aa8.56□□□□□ -1.04
SPTLC1-202ENST00000337841 TIMM8BQ9Y5J9 83 aaPredicted RBP8.56□□□□□ -1.04
SPTLC1-202ENST00000337841 PRKDCP78527 4128 aaKnown RBP8.56□□□□□ -1.04
SPTLC1-202ENST00000337841 TRGV11A0A075B6L2 103 aa8.55□□□□□ -1.04
SPTLC1-202ENST00000337841 RAB19A4D1S5 217 aa8.55□□□□□ -1.04
SPTLC1-202ENST00000337841 GNG4P50150 75 aa8.55□□□□□ -1.04
SPTLC1-202ENST00000337841 ZNF80P51504 273 aaPredicted RBP8.55□□□□□ -1.04
SPTLC1-202ENST00000337841 IFITM2Q01629 132 aa8.55□□□□□ -1.04
SPTLC1-202ENST00000337841 FAM162BQ5T6X4 162 aa8.55□□□□□ -1.04
SPTLC1-202ENST00000337841 Q6ZQT7 251 aa8.55□□□□□ -1.04
SPTLC1-202ENST00000337841 SMDT1Q9H4I9 107 aa8.55□□□□□ -1.04
SPTLC1-202ENST00000337841 DNAH9Q9NYC9 4486 aa8.54□□□□□ -1.04
SPTLC1-202ENST00000337841 LYRM9A8MSI8 78 aa8.54□□□□□ -1.04
SPTLC1-202ENST00000337841 CEBPGP53567 150 aa8.54□□□□□ -1.04
SPTLC1-202ENST00000337841 TDRG1Q3Y452 100 aa8.54□□□□□ -1.04
SPTLC1-202ENST00000337841 CLLU1Q5K131 121 aa8.54□□□□□ -1.04
SPTLC1-202ENST00000337841 FAM222AQ5U5X8 452 aa8.54□□□□□ -1.04
SPTLC1-202ENST00000337841 RNASE8Q8TDE3 154 aaKnown RBP8.54□□□□□ -1.04
SPTLC1-202ENST00000337841 SMIM12Q96EX1 92 aa8.54□□□□□ -1.04
SPTLC1-202ENST00000337841 ZC2HC1AQ96GY0 325 aa8.54□□□□□ -1.04
SPTLC1-202ENST00000337841 DERL1Q9BUN8 251 aa8.54□□□□□ -1.04
SPTLC1-202ENST00000337841 MLST8Q9BVC4 326 aa8.54□□□□□ -1.04
SPTLC1-202ENST00000337841 SDF2L1Q9HCN8 221 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 120.9 ms