RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 RPL19P84098 196 aaKnown RBP4.53□□□□□ -1.68
SMG1-201ENST00000330588 BAXQ07812 192 aa4.53□□□□□ -1.68
SMG1-201ENST00000330588 ARL16Q0P5N6 197 aa4.53□□□□□ -1.68
SMG1-201ENST00000330588 PDE6HQ13956 83 aa4.53□□□□□ -1.68
SMG1-201ENST00000330588 OPCMLQ14982 345 aa4.53□□□□□ -1.68
SMG1-201ENST00000330588 C10orf113Q5VZT2 155 aa4.53□□□□□ -1.68
SMG1-201ENST00000330588 Q6ZRG5 221 aa4.53□□□□□ -1.68
SMG1-201ENST00000330588 LINC00305Q7Z4B0 112 aa4.53□□□□□ -1.68
SMG1-201ENST00000330588 TMEM252Q8N6L7 170 aa4.53□□□□□ -1.68
SMG1-201ENST00000330588 OR11H7Q8NGC8 314 aa4.53□□□□□ -1.68
SMG1-201ENST00000330588 ODF3Q96PU9 254 aa4.53□□□□□ -1.68
SMG1-201ENST00000330588 MGST2Q99735 147 aa4.53□□□□□ -1.68
SMG1-201ENST00000330588 MARVELD1Q9BSK0 173 aa4.53□□□□□ -1.68
SMG1-201ENST00000330588 NDUFAF3Q9BU61 184 aa4.53□□□□□ -1.68
SMG1-201ENST00000330588 SLC25A31Q9H0C2 315 aa4.53□□□□□ -1.68
SMG1-201ENST00000330588 ARL6Q9H0F7 186 aa4.53□□□□□ -1.68
SMG1-201ENST00000330588 DNAJC4Q9NNZ3 241 aa4.53□□□□□ -1.68
SMG1-201ENST00000330588 ZNF331Q9NQX6 463 aaPredicted RBP4.53□□□□□ -1.68
SMG1-201ENST00000330588 KCNIP2Q9NS61 270 aa4.53□□□□□ -1.68
SMG1-201ENST00000330588 APLNQ9ULZ1 77 aa4.53□□□□□ -1.68
SMG1-201ENST00000330588 LSM5Q9Y4Y9 91 aaKnown RBP4.53□□□□□ -1.68
SMG1-201ENST00000330588 LYRM9A8MSI8 78 aa4.53□□□□□ -1.69
SMG1-201ENST00000330588 E5RGE8 158 aa4.53□□□□□ -1.69
SMG1-201ENST00000330588 COX7A2P2O60397 106 aa4.53□□□□□ -1.69
SMG1-201ENST00000330588 TSPAN13O95857 204 aa4.53□□□□□ -1.69
SMG1-201ENST00000330588 LY6G6CO95867 125 aa4.53□□□□□ -1.69
SMG1-201ENST00000330588 INSP01308 110 aa4.53□□□□□ -1.69
SMG1-201ENST00000330588 RLN2P04090 185 aa4.53□□□□□ -1.69
SMG1-201ENST00000330588 PET100P0DJ07 73 aa4.53□□□□□ -1.69
SMG1-201ENST00000330588 CAV2P51636 162 aa4.53□□□□□ -1.69
SMG1-201ENST00000330588 CNN1P51911 297 aaKnown RBP4.53□□□□□ -1.69
SMG1-201ENST00000330588 RRN3P1Q2M238 152 aa4.53□□□□□ -1.69
SMG1-201ENST00000330588 NRARPQ7Z6K4 114 aa4.53□□□□□ -1.69
SMG1-201ENST00000330588 C1orf158Q8N1D5 194 aa4.53□□□□□ -1.69
SMG1-201ENST00000330588 OR4B1Q8NGF8 309 aa4.53□□□□□ -1.69
SMG1-201ENST00000330588 OR8A1Q8NGG7 326 aa4.53□□□□□ -1.69
SMG1-201ENST00000330588 SFRP2Q96HF1 295 aa4.53□□□□□ -1.69
SMG1-201ENST00000330588 SLC35B3Q9H1N7 401 aa4.53□□□□□ -1.69
SMG1-201ENST00000330588 TMEM14CQ9P0S9 112 aa4.53□□□□□ -1.69
SMG1-201ENST00000330588 AGRNO00468 2067 aa4.52□□□□□ -1.69
SMG1-201ENST00000330588 TRAV26-1A0A087WT03 109 aa4.52□□□□□ -1.69
SMG1-201ENST00000330588 IGSF23A1L1A6 192 aa4.52□□□□□ -1.69
SMG1-201ENST00000330588 GAGE10A6NGK3 116 aa4.52□□□□□ -1.69
SMG1-201ENST00000330588 NUDT3O95989 172 aa4.52□□□□□ -1.69
SMG1-201ENST00000330588 IGLC2P0DOY2 106 aa4.52□□□□□ -1.69
SMG1-201ENST00000330588 SEC61GP60059 68 aa4.52□□□□□ -1.69
SMG1-201ENST00000330588 C12orf74Q32Q52 190 aa4.52□□□□□ -1.69
SMG1-201ENST00000330588 GCSAMLQ5JQS6 135 aa4.52□□□□□ -1.69
SMG1-201ENST00000330588 ATRAIDQ6UW56 229 aa4.52□□□□□ -1.69
SMG1-201ENST00000330588 ZNF493Q6ZR52 646 aa4.52□□□□□ -1.69
SMG1-201ENST00000330588 Q6ZTC4 211 aa4.52□□□□□ -1.69
SMG1-201ENST00000330588 COMMD7Q86VX2 200 aa4.52□□□□□ -1.69
SMG1-201ENST00000330588 ZNF738Q8NE65 137 aa4.52□□□□□ -1.69
SMG1-201ENST00000330588 TMEM37Q8WXS4 190 aa4.52□□□□□ -1.69
SMG1-201ENST00000330588 UHRF2Q96PU4 802 aa4.52□□□□□ -1.69
SMG1-201ENST00000330588 SLC39A9Q9NUM3 307 aa4.52□□□□□ -1.69
SMG1-201ENST00000330588 CELA1Q9UNI1 258 aa4.52□□□□□ -1.69
SMG1-201ENST00000330588 IGHV4-4A0A075B6R2 117 aa4.51□□□□□ -1.69
SMG1-201ENST00000330588 DEFB131BA0A096LNP1 70 aa4.51□□□□□ -1.69
SMG1-201ENST00000330588 FAM24AA6NFZ4 105 aa4.51□□□□□ -1.69
SMG1-201ENST00000330588 F6UB75 175 aa4.51□□□□□ -1.69
SMG1-201ENST00000330588 INMT-MINDY4F8WBC2 141 aa4.51□□□□□ -1.69
SMG1-201ENST00000330588 DEFB4AO15263 64 aa4.51□□□□□ -1.69
SMG1-201ENST00000330588 SIVA1O15304 175 aa4.51□□□□□ -1.69
SMG1-201ENST00000330588 CRXO43186 299 aaPredicted RBP4.51□□□□□ -1.69
SMG1-201ENST00000330588 CST7O76096 145 aa4.51□□□□□ -1.69
SMG1-201ENST00000330588 P0DMU3 169 aa4.51□□□□□ -1.69
SMG1-201ENST00000330588 FAM231AP0DMU4 169 aa4.51□□□□□ -1.69
SMG1-201ENST00000330588 FAM231CP0DMU5 169 aa4.51□□□□□ -1.69
SMG1-201ENST00000330588 AKR1C3P42330 323 aa4.51□□□□□ -1.69
SMG1-201ENST00000330588 PPT1P50897 306 aa4.51□□□□□ -1.69
SMG1-201ENST00000330588 FAM3BP58499 235 aaPredicted RBP4.51□□□□□ -1.69
SMG1-201ENST00000330588 S100A10P60903 97 aa4.51□□□□□ -1.69
SMG1-201ENST00000330588 TCTE3Q8IZS6 198 aa4.51□□□□□ -1.69
SMG1-201ENST00000330588 PTH2Q96A98 100 aa4.51□□□□□ -1.69
SMG1-201ENST00000330588 RPUSD4Q96CM3 377 aaKnown RBP4.51□□□□□ -1.69
SMG1-201ENST00000330588 ST6GAL2Q96JF0 529 aa4.51□□□□□ -1.69
SMG1-201ENST00000330588 VPS25Q9BRG1 176 aa4.51□□□□□ -1.69
SMG1-201ENST00000330588 NIPSNAP3BQ9BS92 247 aa4.51□□□□□ -1.69
SMG1-201ENST00000330588 MRPL32Q9BYC8 188 aaKnown RBP4.51□□□□□ -1.69
SMG1-201ENST00000330588 IGLL5B9A064 214 aa4.5□□□□□ -1.69
SMG1-201ENST00000330588 M0QXV9 152 aa4.5□□□□□ -1.69
SMG1-201ENST00000330588 NMBP08949 121 aa4.5□□□□□ -1.69
SMG1-201ENST00000330588 OR10J4P0C629 311 aa4.5□□□□□ -1.69
SMG1-201ENST00000330588 HIST1H1EP10412 219 aaKnown RBP4.5□□□□□ -1.69
SMG1-201ENST00000330588 FGF7P21781 194 aa4.5□□□□□ -1.69
SMG1-201ENST00000330588 IFITM3Q01628 133 aa4.5□□□□□ -1.69
SMG1-201ENST00000330588 Q5BKY6 102 aa4.5□□□□□ -1.69
SMG1-201ENST00000330588 MIC13Q5XKP0 118 aa4.5□□□□□ -1.69
SMG1-201ENST00000330588 RNASEKQ6P5S7 137 aaKnown RBP4.5□□□□□ -1.69
SMG1-201ENST00000330588 RNF182Q8N6D2 247 aa4.5□□□□□ -1.69
SMG1-201ENST00000330588 C15orf53Q8NAA6 179 aa4.5□□□□□ -1.69
SMG1-201ENST00000330588 OR10J6PQ8NGY7 276 aa4.5□□□□□ -1.69
SMG1-201ENST00000330588 C16orf74Q96GX8 76 aa4.5□□□□□ -1.69
SMG1-201ENST00000330588 LINC00467Q9BRT7 94 aa4.5□□□□□ -1.69
SMG1-201ENST00000330588 NPCDR1Q9BY65 106 aa4.5□□□□□ -1.69
SMG1-201ENST00000330588 TENM2Q9NT68 2774 aa4.5□□□□□ -1.69
SMG1-201ENST00000330588 DNAH7Q8WXX0 4024 aa4.5□□□□□ -1.69
SMG1-201ENST00000330588 TRBV19A0A075B6N1 114 aa4.49□□□□□ -1.69
SMG1-201ENST00000330588 UBE2L5PA0A1B0GUS4 154 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms