RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 TCTAP57738 103 aa11.84□□□□□ -0.51
BRCC3-201ENST00000330045 CLEC19AQ6UXS0 136 aa11.84□□□□□ -0.51
BRCC3-201ENST00000330045 WFDC3Q8IUB2 231 aa11.84□□□□□ -0.51
BRCC3-201ENST00000330045 CLPSL1A2RUU4 121 aa11.84□□□□□ -0.51
BRCC3-201ENST00000330045 C7orf71A4D174 169 aa11.84□□□□□ -0.51
BRCC3-201ENST00000330045 SMAD7O15105 426 aaKnown RBP11.84□□□□□ -0.51
BRCC3-201ENST00000330045 GAS8-AS1O95177 125 aa11.84□□□□□ -0.51
BRCC3-201ENST00000330045 PPIFP30405 207 aaKnown RBP11.84□□□□□ -0.51
BRCC3-201ENST00000330045 TRAV8-6A0A0B4J262 113 aa11.83□□□□□ -0.52
BRCC3-201ENST00000330045 LINC01546A6NGU7 62 aa11.83□□□□□ -0.52
BRCC3-201ENST00000330045 TNFRSF6BO95407 300 aa11.83□□□□□ -0.52
BRCC3-201ENST00000330045 CCDC140Q96MF4 163 aa11.83□□□□□ -0.52
BRCC3-201ENST00000330045 IGHV3OR16-13A0A075B7E8 117 aa11.83□□□□□ -0.52
BRCC3-201ENST00000330045 IGHV3-74A0A0B4J1X5 117 aa11.83□□□□□ -0.52
BRCC3-201ENST00000330045 G3V318 75 aa11.83□□□□□ -0.52
BRCC3-201ENST00000330045 SAA4P35542 130 aa11.83□□□□□ -0.52
BRCC3-201ENST00000330045 OR9G4Q8NGQ1 327 aa11.83□□□□□ -0.52
BRCC3-201ENST00000330045 C18orf15Q96N68 181 aa11.83□□□□□ -0.52
BRCC3-201ENST00000330045 NXT2Q9NPJ8 142 aaKnown RBP11.83□□□□□ -0.52
BRCC3-201ENST00000330045 DKK2Q9UBU2 259 aa11.83□□□□□ -0.52
BRCC3-201ENST00000330045 LRRK2Q5S007 2527 aa11.83□□□□□ -0.52
BRCC3-201ENST00000330045 A1L4Q6 167 aa11.82□□□□□ -0.52
BRCC3-201ENST00000330045 AGPAT4-IT1Q9H0P7 198 aa11.82□□□□□ -0.52
BRCC3-201ENST00000330045 IGKV3D-20A0A0C4DH25 116 aa11.82□□□□□ -0.52
BRCC3-201ENST00000330045 LINC01548A6NM66 108 aa11.82□□□□□ -0.52
BRCC3-201ENST00000330045 SIVA1O15304 175 aa11.82□□□□□ -0.52
BRCC3-201ENST00000330045 LEPP41159 167 aa11.82□□□□□ -0.52
BRCC3-201ENST00000330045 PCP4P48539 62 aa11.82□□□□□ -0.52
BRCC3-201ENST00000330045 EEF1AKMT3Q96AZ1 226 aa11.82□□□□□ -0.52
BRCC3-201ENST00000330045 EVI2AP22794 236 aa11.81□□□□□ -0.52
BRCC3-201ENST00000330045 FCER1GP30273 86 aa11.81□□□□□ -0.52
BRCC3-201ENST00000330045 FAM208BQ5VWN6 2430 aa11.81□□□□□ -0.52
BRCC3-201ENST00000330045 NMUP48645 174 aa11.81□□□□□ -0.52
BRCC3-201ENST00000330045 METTL26Q96S19 204 aa11.81□□□□□ -0.52
BRCC3-201ENST00000330045 IGHV3-49A0A0A0MS15 119 aa11.8□□□□□ -0.52
BRCC3-201ENST00000330045 A6NDN8 102 aa11.8□□□□□ -0.52
BRCC3-201ENST00000330045 GATA1P15976 413 aaPredicted RBP11.8□□□□□ -0.52
BRCC3-201ENST00000330045 CDKN1BP46527 198 aa11.8□□□□□ -0.52
BRCC3-201ENST00000330045 HSD52Q0P140 79 aa11.8□□□□□ -0.52
BRCC3-201ENST00000330045 TMEM78Q5T7P6 136 aa11.8□□□□□ -0.52
BRCC3-201ENST00000330045 C11orf21Q9P2W6 132 aa11.8□□□□□ -0.52
BRCC3-201ENST00000330045 FBN2P35556 2912 aa11.8□□□□□ -0.52
BRCC3-201ENST00000330045 TRBV7-1A0A0A6YYK4 115 aa11.8□□□□□ -0.52
BRCC3-201ENST00000330045 TRAV8-2A0A0B4J237 113 aa11.8□□□□□ -0.52
BRCC3-201ENST00000330045 CENPVL3A0A0U1RRI6 287 aa11.8□□□□□ -0.52
BRCC3-201ENST00000330045 ZNF207O43670 478 aaKnown RBP11.8□□□□□ -0.52
BRCC3-201ENST00000330045 PCP2Q8IVA1 136 aa11.8□□□□□ -0.52
BRCC3-201ENST00000330045 OR4X2Q8NGF9 303 aa11.79□□□□□ -0.52
BRCC3-201ENST00000330045 CST9LQ9H4G1 147 aa11.79□□□□□ -0.52
BRCC3-201ENST00000330045 H3BRM9 83 aa11.79□□□□□ -0.52
BRCC3-201ENST00000330045 EFNA4P52798 201 aa11.79□□□□□ -0.52
BRCC3-201ENST00000330045 C21orf62-AS1Q17RA5 79 aa11.79□□□□□ -0.52
BRCC3-201ENST00000330045 ADAMTSL5Q6ZMM2 481 aa11.79□□□□□ -0.52
BRCC3-201ENST00000330045 C8orf86Q6ZUL3 223 aa11.79□□□□□ -0.52
BRCC3-201ENST00000330045 MRPL53Q96EL3 112 aaKnown RBP11.79□□□□□ -0.52
BRCC3-201ENST00000330045 PRSS1P07477 247 aa11.78□□□□□ -0.52
BRCC3-201ENST00000330045 PIFOQ8TCI5 191 aa11.78□□□□□ -0.52
BRCC3-201ENST00000330045 UBR5O95071 2799 aaPredicted RBP11.78□□□□□ -0.52
BRCC3-201ENST00000330045 TRGV3P03979 118 aa11.78□□□□□ -0.52
BRCC3-201ENST00000330045 LMO4P61968 165 aa11.78□□□□□ -0.52
BRCC3-201ENST00000330045 ODF1Q14990 250 aa11.78□□□□□ -0.52
BRCC3-201ENST00000330045 Q8N8P6 123 aa11.78□□□□□ -0.52
BRCC3-201ENST00000330045 AP1S3Q96PC3 154 aa11.78□□□□□ -0.52
BRCC3-201ENST00000330045 ZMAT4Q9H898 229 aa11.78□□□□□ -0.52
BRCC3-201ENST00000330045 HIF1ANQ9NWT6 349 aa11.78□□□□□ -0.52
BRCC3-201ENST00000330045 GAGE12BA1L429 117 aa11.77□□□□□ -0.53
BRCC3-201ENST00000330045 NPFFO15130 113 aa11.77□□□□□ -0.53
BRCC3-201ENST00000330045 SMIM15Q7Z3B0 74 aa11.77□□□□□ -0.53
BRCC3-201ENST00000330045 C5orf56Q8N8D9 126 aa11.77□□□□□ -0.53
BRCC3-201ENST00000330045 OR2K2Q8NGT1 345 aa11.77□□□□□ -0.53
BRCC3-201ENST00000330045 TMEM158Q8WZ71 300 aa11.77□□□□□ -0.53
BRCC3-201ENST00000330045 BPESC1Q9GZL8 116 aa11.77□□□□□ -0.53
BRCC3-201ENST00000330045 U3KQE9 123 aa11.77□□□□□ -0.53
BRCC3-201ENST00000330045 POLQO75417 2590 aa11.77□□□□□ -0.53
BRCC3-201ENST00000330045 IGHV7-4-1A0A0J9YVY3 117 aa11.77□□□□□ -0.53
BRCC3-201ENST00000330045 C9orf118A6NHY6 69 aa11.77□□□□□ -0.53
BRCC3-201ENST00000330045 ATP5G2Q06055 141 aa11.77□□□□□ -0.53
BRCC3-201ENST00000330045 PSMG4Q5JS54 123 aa11.77□□□□□ -0.53
BRCC3-201ENST00000330045 C9orf47Q6ZRZ4 202 aa11.77□□□□□ -0.53
BRCC3-201ENST00000330045 IGLV2-18A0A075B6J9 118 aa11.76□□□□□ -0.53
BRCC3-201ENST00000330045 GAGE10A6NGK3 116 aa11.76□□□□□ -0.53
BRCC3-201ENST00000330045 KIR3DS1Q14943 382 aa11.76□□□□□ -0.53
BRCC3-201ENST00000330045 RNF151Q2KHN1 245 aa11.76□□□□□ -0.53
BRCC3-201ENST00000330045 HHLA3Q9XRX5 114 aa11.76□□□□□ -0.53
BRCC3-201ENST00000330045 OCIAD2Q56VL3 154 aa11.76□□□□□ -0.53
BRCC3-201ENST00000330045 ATP5LO75964 103 aa11.75□□□□□ -0.53
BRCC3-201ENST00000330045 IGKCP01834 107 aa11.75□□□□□ -0.53
BRCC3-201ENST00000330045 Q6ZQT7 251 aa11.75□□□□□ -0.53
BRCC3-201ENST00000330045 TMEM219Q86XT9 240 aa11.75□□□□□ -0.53
BRCC3-201ENST00000330045 C16orf92Q96LL3 132 aa11.75□□□□□ -0.53
BRCC3-201ENST00000330045 FOXC2Q99958 501 aa11.75□□□□□ -0.53
BRCC3-201ENST00000330045 UFC1Q9Y3C8 167 aa11.75□□□□□ -0.53
BRCC3-201ENST00000330045 NBPF19A0A087WUL8 3843 aa11.74□□□□□ -0.53
BRCC3-201ENST00000330045 CHD6Q8TD26 2715 aa11.74□□□□□ -0.53
BRCC3-201ENST00000330045 IGKV2D-26A0A0A0MRZ7 120 aa11.74□□□□□ -0.53
BRCC3-201ENST00000330045 H3BUT2 72 aa11.74□□□□□ -0.53
BRCC3-201ENST00000330045 SPANXN1Q5VSR9 72 aa11.74□□□□□ -0.53
BRCC3-201ENST00000330045 ZNF843Q8N446 348 aa11.74□□□□□ -0.53
BRCC3-201ENST00000330045 TRAV26-2A0A0B4J265 109 aa11.74□□□□□ -0.53
BRCC3-201ENST00000330045 PRSS47A8MTI9 375 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms