RNA–Protein interactions for RNA: ENST00000329553.2

RIPPLY3-201, Transcript of ripply transcriptional repressor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPPLY3, Length 2,235 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-201ENST00000329553 G0S2P27469 103 aa15.44■□□□□ 0.06
RIPPLY3-201ENST00000329553 FOXA3P55318 350 aaPredicted RBP15.44■□□□□ 0.06
RIPPLY3-201ENST00000329553 FAM106AQ4KMX7 169 aa15.44■□□□□ 0.06
RIPPLY3-201ENST00000329553 PRR31Q5SQ13 230 aa15.44■□□□□ 0.06
RIPPLY3-201ENST00000329553 Q6ZSV7 163 aa15.44■□□□□ 0.06
RIPPLY3-201ENST00000329553 RNF182Q8N6D2 247 aa15.44■□□□□ 0.06
RIPPLY3-201ENST00000329553 KLHDC1Q8N7A1 406 aa15.44■□□□□ 0.06
RIPPLY3-201ENST00000329553 UBE2E2Q96LR5 201 aa15.44■□□□□ 0.06
RIPPLY3-201ENST00000329553 SLC50A1Q9BRV3 221 aa15.44■□□□□ 0.06
RIPPLY3-201ENST00000329553 ZNF25P17030 456 aaPredicted RBP15.43■□□□□ 0.06
RIPPLY3-201ENST00000329553 ZNF124Q15973 351 aa15.43■□□□□ 0.06
RIPPLY3-201ENST00000329553 ZFP30Q9Y2G7 519 aa15.43■□□□□ 0.06
RIPPLY3-201ENST00000329553 TRAV8-2A0A0B4J237 113 aa15.43■□□□□ 0.06
RIPPLY3-201ENST00000329553 SERTM2A0A1B0GWG4 89 aa15.43■□□□□ 0.06
RIPPLY3-201ENST00000329553 LGALS1P09382 135 aaKnown RBP15.43■□□□□ 0.06
RIPPLY3-201ENST00000329553 C8orf86Q6ZUL3 223 aa15.43■□□□□ 0.06
RIPPLY3-201ENST00000329553 DAZ1Q9NQZ3 744 aaKnown RBP15.43■□□□□ 0.06
RIPPLY3-201ENST00000329553 IGHV7-4-1A0A0J9YVY3 117 aa15.42■□□□□ 0.06
RIPPLY3-201ENST00000329553 HAX1O00165 279 aa15.42■□□□□ 0.06
RIPPLY3-201ENST00000329553 ATOH7Q8N100 152 aa15.42■□□□□ 0.06
RIPPLY3-201ENST00000329553 CHCHD1Q96BP2 118 aaKnown RBP15.42■□□□□ 0.06
RIPPLY3-201ENST00000329553 NDFIP1Q9BT67 221 aa15.42■□□□□ 0.06
RIPPLY3-201ENST00000329553 EDN2P20800 178 aa15.41■□□□□ 0.06
RIPPLY3-201ENST00000329553 RHPN1-AS1Q9BWJ2 59 aa15.41■□□□□ 0.06
RIPPLY3-201ENST00000329553 NOTCH2Q04721 2471 aa15.41■□□□□ 0.06
RIPPLY3-201ENST00000329553 CUBNO60494 3623 aa15.41■□□□□ 0.06
RIPPLY3-201ENST00000329553 LOC102724200A0A096LPH7 203 aaPredicted RBP15.41■□□□□ 0.06
RIPPLY3-201ENST00000329553 PRAC2D3DTV9 90 aa15.41■□□□□ 0.06
RIPPLY3-201ENST00000329553 K7EMT4 169 aa15.41■□□□□ 0.06
RIPPLY3-201ENST00000329553 MAJINQ3KP22 176 aa15.41■□□□□ 0.06
RIPPLY3-201ENST00000329553 VGLL1Q99990 258 aa15.41■□□□□ 0.06
RIPPLY3-201ENST00000329553 TMEM208Q9BTX3 173 aa15.41■□□□□ 0.06
RIPPLY3-201ENST00000329553 TRAV9-2A0A087WT02 112 aa15.4■□□□□ 0.06
RIPPLY3-201ENST00000329553 BATFQ16520 125 aa15.4■□□□□ 0.06
RIPPLY3-201ENST00000329553 Q6ZN92 141 aa15.4■□□□□ 0.06
RIPPLY3-201ENST00000329553 ZC2HC1AQ96GY0 325 aa15.4■□□□□ 0.06
RIPPLY3-201ENST00000329553 SMPXQ9UHP9 88 aa15.4■□□□□ 0.06
RIPPLY3-201ENST00000329553 C20orf202A1L168 122 aa15.4■□□□□ 0.06
RIPPLY3-201ENST00000329553 CRXO43186 299 aaPredicted RBP15.4■□□□□ 0.06
RIPPLY3-201ENST00000329553 COL5A1-AS1Q5SY13 56 aa15.4■□□□□ 0.06
RIPPLY3-201ENST00000329553 TMEM160Q9NX00 188 aa15.4■□□□□ 0.06
RIPPLY3-201ENST00000329553 IGHV4OR15-8A0A075B7B6 117 aa15.39■□□□□ 0.05
RIPPLY3-201ENST00000329553 A0A087WW49 117 aa15.39■□□□□ 0.05
RIPPLY3-201ENST00000329553 DLEU1O43261 78 aa15.39■□□□□ 0.05
RIPPLY3-201ENST00000329553 GAGE1Q13065 139 aa15.39■□□□□ 0.05
RIPPLY3-201ENST00000329553 C18orf65Q6ZTR6 163 aa15.39■□□□□ 0.05
RIPPLY3-201ENST00000329553 SPATA12Q7Z6I5 190 aa15.39■□□□□ 0.05
RIPPLY3-201ENST00000329553 C8orf49Q96NF6 230 aa15.39■□□□□ 0.05
RIPPLY3-201ENST00000329553 M0QZ24 198 aa15.39■□□□□ 0.05
RIPPLY3-201ENST00000329553 HNRNPA3P51991 378 aaKnown RBP15.39■□□□□ 0.05
RIPPLY3-201ENST00000329553 TCTEX1D4Q5JR98 221 aa15.39■□□□□ 0.05
RIPPLY3-201ENST00000329553 TMEM70Q9BUB7 260 aa15.39■□□□□ 0.05
RIPPLY3-201ENST00000329553 CLEC5AQ9NY25 188 aa15.39■□□□□ 0.05
RIPPLY3-201ENST00000329553 SELENOKQ9Y6D0 94 aa15.39■□□□□ 0.05
RIPPLY3-201ENST00000329553 IGHV1-24A0A0C4DH33 117 aa15.38■□□□□ 0.05
RIPPLY3-201ENST00000329553 LY6G6DO95868 133 aa15.38■□□□□ 0.05
RIPPLY3-201ENST00000329553 C16orf92Q96LL3 132 aa15.38■□□□□ 0.05
RIPPLY3-201ENST00000329553 UFC1Q9Y3C8 167 aa15.38■□□□□ 0.05
RIPPLY3-201ENST00000329553 LINC00614P0C842 121 aa15.37■□□□□ 0.05
RIPPLY3-201ENST00000329553 CRIP1P50238 77 aa15.37■□□□□ 0.05
RIPPLY3-201ENST00000329553 LAMTOR2Q9Y2Q5 125 aa15.37■□□□□ 0.05
RIPPLY3-201ENST00000329553 RPL11P62913 178 aaKnown RBP15.37■□□□□ 0.05
RIPPLY3-201ENST00000329553 ERCC8Q13216 396 aa15.37■□□□□ 0.05
RIPPLY3-201ENST00000329553 DMRTA1Q5VZB9 504 aa15.37■□□□□ 0.05
RIPPLY3-201ENST00000329553 GATD1Q8NB37 220 aa15.37■□□□□ 0.05
RIPPLY3-201ENST00000329553 Q8TAT8 98 aa15.37■□□□□ 0.05
RIPPLY3-201ENST00000329553 PRR25Q96S07 402 aa15.37■□□□□ 0.05
RIPPLY3-201ENST00000329553 SRD5A1P18405 259 aa15.36■□□□□ 0.05
RIPPLY3-201ENST00000329553 A0A1B0GUT8 65 aa15.36■□□□□ 0.05
RIPPLY3-201ENST00000329553 TMEM213A2RRL7 107 aa15.36■□□□□ 0.05
RIPPLY3-201ENST00000329553 FBLL1A6NHQ2 334 aaKnown RBP15.36■□□□□ 0.05
RIPPLY3-201ENST00000329553 TSPOP30536 169 aa15.36■□□□□ 0.05
RIPPLY3-201ENST00000329553 SYNJ2BPP57105 145 aa15.36■□□□□ 0.05
RIPPLY3-201ENST00000329553 SCGB2A2Q13296 93 aa15.36■□□□□ 0.05
RIPPLY3-201ENST00000329553 MRPL53Q96EL3 112 aaKnown RBP15.36■□□□□ 0.05
RIPPLY3-201ENST00000329553 MRPS16Q9Y3D3 137 aaKnown RBP15.36■□□□□ 0.05
RIPPLY3-201ENST00000329553 MTORP42345 2549 aa15.35■□□□□ 0.05
RIPPLY3-201ENST00000329553 SOCS3O14543 225 aa15.35■□□□□ 0.05
RIPPLY3-201ENST00000329553 IGLL1P15814 213 aa15.35■□□□□ 0.05
RIPPLY3-201ENST00000329553 HOXD3P31249 432 aaPredicted RBP15.35■□□□□ 0.05
RIPPLY3-201ENST00000329553 SAPCD1Q5SSQ6 148 aa15.35■□□□□ 0.05
RIPPLY3-201ENST00000329553 C20orf173Q96LM9 149 aa15.35■□□□□ 0.05
RIPPLY3-201ENST00000329553 IGKV3-7A0A075B6H7 116 aa15.35■□□□□ 0.05
RIPPLY3-201ENST00000329553 RBAKDNA6NC62 111 aa15.35■□□□□ 0.05
RIPPLY3-201ENST00000329553 RNASE1P07998 156 aaKnown RBP15.35■□□□□ 0.05
RIPPLY3-201ENST00000329553 OTOGQ6ZRI0 2925 aa15.34■□□□□ 0.05
RIPPLY3-201ENST00000329553 SYS1-DBNDD2H3BUS1 97 aa15.34■□□□□ 0.05
RIPPLY3-201ENST00000329553 ARMS2P0C7Q2 107 aa15.34■□□□□ 0.05
RIPPLY3-201ENST00000329553 TFPI2P48307 235 aa15.34■□□□□ 0.05
RIPPLY3-201ENST00000329553 DEFB136Q30KP8 78 aa15.34■□□□□ 0.05
RIPPLY3-201ENST00000329553 HIST2H2BDQ6DRA6 164 aa15.34■□□□□ 0.05
RIPPLY3-201ENST00000329553 STPG4Q8N801 248 aa15.34■□□□□ 0.05
RIPPLY3-201ENST00000329553 NF1P21359 2839 aa15.34■□□□□ 0.05
RIPPLY3-201ENST00000329553 LEPROTL1O95214 131 aa15.33■□□□□ 0.05
RIPPLY3-201ENST00000329553 COX8CQ7Z4L0 72 aa15.33■□□□□ 0.05
RIPPLY3-201ENST00000329553 ZNF418Q8TF45 676 aaPredicted RBP15.33■□□□□ 0.05
RIPPLY3-201ENST00000329553 HIVEP2P31629 2446 aa15.33■□□□□ 0.04
RIPPLY3-201ENST00000329553 LGALS9O00182 355 aa15.33■□□□□ 0.04
RIPPLY3-201ENST00000329553 OR5AL1P0C617 328 aa15.33■□□□□ 0.04
RIPPLY3-201ENST00000329553 RIGQ13278 110 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms