RNA–Protein interactions for RNA: ENST00000324444.7

SYNE4-201, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE4, Length 1,354 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-201ENST00000324444 FAM162BQ5T6X4 162 aa13.43□□□□□ -0.26
SYNE4-201ENST00000324444 PRR27Q6MZM9 219 aa13.43□□□□□ -0.26
SYNE4-201ENST00000324444 KCNIP4Q6PIL6 250 aa13.43□□□□□ -0.26
SYNE4-201ENST00000324444 FAM24BQ8N5W8 94 aa13.43□□□□□ -0.26
SYNE4-201ENST00000324444 MAP6D1Q9H9H5 199 aa13.43□□□□□ -0.26
SYNE4-201ENST00000324444 FABP5P3A8MUU1 101 aa13.42□□□□□ -0.26
SYNE4-201ENST00000324444 CT83Q5H943 113 aa13.42□□□□□ -0.26
SYNE4-201ENST00000324444 CLUHP3Q96NS8 147 aa13.42□□□□□ -0.26
SYNE4-201ENST00000324444 XKRY2A2RUG3 117 aa13.41□□□□□ -0.26
SYNE4-201ENST00000324444 IZUMO1RA6ND01 250 aa13.41□□□□□ -0.26
SYNE4-201ENST00000324444 ZNF705GA8MUZ8 300 aaPredicted RBP13.41□□□□□ -0.26
SYNE4-201ENST00000324444 HLA-DRB4P13762 266 aa13.41□□□□□ -0.26
SYNE4-201ENST00000324444 CRISP2P16562 243 aa13.41□□□□□ -0.26
SYNE4-201ENST00000324444 NUDT10Q8NFP7 164 aa13.41□□□□□ -0.26
SYNE4-201ENST00000324444 Q8TAT8 98 aa13.41□□□□□ -0.26
SYNE4-201ENST00000324444 NUDT11Q96G61 164 aa13.41□□□□□ -0.26
SYNE4-201ENST00000324444 ZC2HC1AQ96GY0 325 aa13.41□□□□□ -0.26
SYNE4-201ENST00000324444 HLA-DRB4X5D2U9 266 aa13.41□□□□□ -0.26
SYNE4-201ENST00000324444 C19orf71A6NCJ1 209 aa13.4□□□□□ -0.26
SYNE4-201ENST00000324444 IGLL1P15814 213 aa13.4□□□□□ -0.26
SYNE4-201ENST00000324444 GTSCR1Q86UQ5 136 aa13.4□□□□□ -0.26
SYNE4-201ENST00000324444 FAM19A4Q96LR4 140 aa13.4□□□□□ -0.26
SYNE4-201ENST00000324444 A8MWL6 223 aa13.39□□□□□ -0.27
SYNE4-201ENST00000324444 F6UB75 175 aa13.39□□□□□ -0.27
SYNE4-201ENST00000324444 GPX1P07203 203 aa13.39□□□□□ -0.27
SYNE4-201ENST00000324444 RPS20P60866 119 aaKnown RBP13.39□□□□□ -0.27
SYNE4-201ENST00000324444 BTN1A1Q13410 526 aa13.39□□□□□ -0.27
SYNE4-201ENST00000324444 C8orf49Q96NF6 230 aa13.39□□□□□ -0.27
SYNE4-201ENST00000324444 RNASE7Q9H1E1 156 aaKnown RBP13.39□□□□□ -0.27
SYNE4-201ENST00000324444 RPP21Q9H633 154 aaKnown RBP13.39□□□□□ -0.27
SYNE4-201ENST00000324444 TRAV9-1A0A075B6T8 112 aa13.38□□□□□ -0.27
SYNE4-201ENST00000324444 A8MTW9 85 aa13.38□□□□□ -0.27
SYNE4-201ENST00000324444 AMBPP02760 352 aa13.38□□□□□ -0.27
SYNE4-201ENST00000324444 PFN1P07737 140 aaKnown RBP13.38□□□□□ -0.27
SYNE4-201ENST00000324444 ZNF705DP0CH99 300 aaPredicted RBP13.38□□□□□ -0.27
SYNE4-201ENST00000324444 ZNF705BP0CI00 300 aaPredicted RBP13.38□□□□□ -0.27
SYNE4-201ENST00000324444 APRG1Q8IVJ8 170 aa13.38□□□□□ -0.27
SYNE4-201ENST00000324444 IL36BQ9NZH7 164 aa13.38□□□□□ -0.27
SYNE4-201ENST00000324444 V9GYV3 84 aa13.38□□□□□ -0.27
SYNE4-201ENST00000324444 TRAV21A0A0B4J279 112 aa13.37□□□□□ -0.27
SYNE4-201ENST00000324444 FAM231BA6NCW3 169 aa13.37□□□□□ -0.27
SYNE4-201ENST00000324444 H3BMM0 161 aa13.37□□□□□ -0.27
SYNE4-201ENST00000324444 SCO1O75880 301 aa13.37□□□□□ -0.27
SYNE4-201ENST00000324444 NUTF2P61970 127 aaKnown RBP13.37□□□□□ -0.27
SYNE4-201ENST00000324444 ACTL10Q5JWF8 245 aa13.37□□□□□ -0.27
SYNE4-201ENST00000324444 STHQ8IWL8 128 aa13.37□□□□□ -0.27
SYNE4-201ENST00000324444 DNAH3Q8TD57 4116 aa13.37□□□□□ -0.27
SYNE4-201ENST00000324444 SH2D1AO60880 128 aa13.36□□□□□ -0.27
SYNE4-201ENST00000324444 CDKN1BP46527 198 aa13.36□□□□□ -0.27
SYNE4-201ENST00000324444 ODF3L2Q3SX64 289 aa13.36□□□□□ -0.27
SYNE4-201ENST00000324444 TMEM88Q6PEY1 159 aa13.36□□□□□ -0.27
SYNE4-201ENST00000324444 GFRA4Q9GZZ7 299 aa13.36□□□□□ -0.27
SYNE4-201ENST00000324444 TMEM189A5PLL7 270 aa13.35□□□□□ -0.27
SYNE4-201ENST00000324444 KLLNB2CW77 178 aa13.35□□□□□ -0.27
SYNE4-201ENST00000324444 GDF5OSQ5U4N7 250 aa13.35□□□□□ -0.27
SYNE4-201ENST00000324444 CBLN2Q8IUK8 224 aa13.35□□□□□ -0.27
SYNE4-201ENST00000324444 ZFAND2AQ8N6M9 145 aa13.35□□□□□ -0.27
SYNE4-201ENST00000324444 OR2D3Q8NGH3 330 aa13.35□□□□□ -0.27
SYNE4-201ENST00000324444 MRAPQ8TCY5 172 aa13.35□□□□□ -0.27
SYNE4-201ENST00000324444 TSKUQ8WUA8 353 aa13.35□□□□□ -0.27
SYNE4-201ENST00000324444 PRB4P10163 310 aaPredicted RBP13.34□□□□□ -0.27
SYNE4-201ENST00000324444 CRIP1P50238 77 aa13.34□□□□□ -0.27
SYNE4-201ENST00000324444 Q6AWC8 147 aa13.34□□□□□ -0.27
SYNE4-201ENST00000324444 KNCNA6PVL3 124 aa13.33□□□□□ -0.27
SYNE4-201ENST00000324444 DEFB1P60022 68 aa13.33□□□□□ -0.27
SYNE4-201ENST00000324444 LINC00322Q6ZN03 302 aaPredicted RBP13.33□□□□□ -0.27
SYNE4-201ENST00000324444 NAT8BQ9UHF3 227 aa13.33□□□□□ -0.27
SYNE4-201ENST00000324444 SMIM27A0A1W2PRY6 76 aa13.32□□□□□ -0.28
SYNE4-201ENST00000324444 ORM1P02763 201 aa13.32□□□□□ -0.28
SYNE4-201ENST00000324444 LINC01559Q495D7 138 aa13.32□□□□□ -0.28
SYNE4-201ENST00000324444 C20orf144Q9BQM9 153 aa13.32□□□□□ -0.28
SYNE4-201ENST00000324444 TRBV24-1A0A075B6N3 115 aa13.32□□□□□ -0.28
SYNE4-201ENST00000324444 C7orf71A4D174 169 aa13.32□□□□□ -0.28
SYNE4-201ENST00000324444 CXCL1P09341 107 aa13.32□□□□□ -0.28
SYNE4-201ENST00000324444 RNASE4P34096 147 aaKnown RBP13.32□□□□□ -0.28
SYNE4-201ENST00000324444 ZNF80P51504 273 aaPredicted RBP13.32□□□□□ -0.28
SYNE4-201ENST00000324444 ELOBQ15370 118 aa13.32□□□□□ -0.28
SYNE4-201ENST00000324444 AMTNQ6UX39 209 aa13.32□□□□□ -0.28
SYNE4-201ENST00000324444 KCNS1Q96KK3 526 aa13.32□□□□□ -0.28
SYNE4-201ENST00000324444 A0A1W2PPQ1 181 aa13.31□□□□□ -0.28
SYNE4-201ENST00000324444 IGKV3-20P01619 116 aa13.31□□□□□ -0.28
SYNE4-201ENST00000324444 CD7P09564 240 aa13.31□□□□□ -0.28
SYNE4-201ENST00000324444 FOXA3P55318 350 aaPredicted RBP13.31□□□□□ -0.28
SYNE4-201ENST00000324444 COX19Q49B96 90 aa13.31□□□□□ -0.28
SYNE4-201ENST00000324444 MORN3Q6PF18 240 aaPredicted RBP13.31□□□□□ -0.28
SYNE4-201ENST00000324444 URGCP-MRPS24S4R325 110 aa13.31□□□□□ -0.28
SYNE4-201ENST00000324444 TRPT1Q86TN4 253 aaKnown RBP13.3□□□□□ -0.28
SYNE4-201ENST00000324444 BORCS7Q96B45 105 aa13.3□□□□□ -0.28
SYNE4-201ENST00000324444 C1QTNF4Q9BXJ3 329 aa13.3□□□□□ -0.28
SYNE4-201ENST00000324444 C19orf73Q9NVV2 129 aa13.3□□□□□ -0.28
SYNE4-201ENST00000324444 KRTAP10-11P60412 298 aa13.29□□□□□ -0.28
SYNE4-201ENST00000324444 EGFEM1PQ0D2K5 195 aa13.29□□□□□ -0.28
SYNE4-201ENST00000324444 FAM159AQ6UWV7 190 aa13.29□□□□□ -0.28
SYNE4-201ENST00000324444 PYGO2Q9BRQ0 406 aa13.29□□□□□ -0.28
SYNE4-201ENST00000324444 SORL1Q92673 2214 aa13.28□□□□□ -0.28
SYNE4-201ENST00000324444 J3KRW8 73 aa13.28□□□□□ -0.28
SYNE4-201ENST00000324444 SPINK13Q1W4C9 94 aa13.28□□□□□ -0.28
SYNE4-201ENST00000324444 RASL11AQ6T310 242 aa13.28□□□□□ -0.28
SYNE4-201ENST00000324444 ATP5L2Q7Z4Y8 100 aa13.28□□□□□ -0.28
SYNE4-201ENST00000324444 NEU1Q99519 415 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms