RNA–Protein interactions for RNA: ENST00000323701.10

USP39-201, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,177 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-201ENST00000323701 OR2D3Q8NGH3 330 aa13.88□□□□□ -0.19
USP39-201ENST00000323701 DLX4Q92988 240 aaPredicted RBP13.88□□□□□ -0.19
USP39-201ENST00000323701 CITED2Q99967 270 aaPredicted RBP13.88□□□□□ -0.19
USP39-201ENST00000323701 TRAV9-1A0A075B6T8 112 aa13.87□□□□□ -0.19
USP39-201ENST00000323701 RBAKDNA6NC62 111 aa13.87□□□□□ -0.19
USP39-201ENST00000323701 TFPI2P48307 235 aa13.87□□□□□ -0.19
USP39-201ENST00000323701 Q6ZQT7 251 aa13.87□□□□□ -0.19
USP39-201ENST00000323701 COX8CQ7Z4L0 72 aa13.87□□□□□ -0.19
USP39-201ENST00000323701 ZNF664Q8N3J9 261 aa13.87□□□□□ -0.19
USP39-201ENST00000323701 MS4A6AQ9H2W1 248 aa13.87□□□□□ -0.19
USP39-201ENST00000323701 SH2D1AO60880 128 aa13.86□□□□□ -0.19
USP39-201ENST00000323701 BTF3P20290 206 aaKnown RBP13.86□□□□□ -0.19
USP39-201ENST00000323701 ZNF575Q86XF7 245 aa13.86□□□□□ -0.19
USP39-201ENST00000323701 RAX2Q96IS3 184 aa13.86□□□□□ -0.19
USP39-201ENST00000323701 IZUMO1RA6ND01 250 aa13.86□□□□□ -0.19
USP39-201ENST00000323701 TCAPO15273 167 aa13.86□□□□□ -0.19
USP39-201ENST00000323701 SAPCD1Q5SSQ6 148 aa13.86□□□□□ -0.19
USP39-201ENST00000323701 JMJD1CQ15652 2540 aa13.86□□□□□ -0.19
USP39-201ENST00000323701 C9orf47Q6ZRZ4 202 aa13.85□□□□□ -0.19
USP39-201ENST00000323701 NAT8BQ9UHF3 227 aa13.85□□□□□ -0.19
USP39-201ENST00000323701 NUTF2P61970 127 aaKnown RBP13.85□□□□□ -0.19
USP39-201ENST00000323701 CT83Q5H943 113 aa13.85□□□□□ -0.19
USP39-201ENST00000323701 GDF5OSQ5U4N7 250 aa13.85□□□□□ -0.19
USP39-201ENST00000323701 DPF1Q92782 380 aa13.85□□□□□ -0.19
USP39-201ENST00000323701 TMSB15BA0A087X1C1 80 aa13.84□□□□□ -0.19
USP39-201ENST00000323701 A8MWL6 223 aa13.84□□□□□ -0.19
USP39-201ENST00000323701 NUPR1O60356 82 aa13.84□□□□□ -0.19
USP39-201ENST00000323701 CT45A10P0DMU9 189 aa13.84□□□□□ -0.19
USP39-201ENST00000323701 FAM162BQ5T6X4 162 aa13.84□□□□□ -0.19
USP39-201ENST00000323701 TMEM256Q8N2U0 113 aa13.84□□□□□ -0.19
USP39-201ENST00000323701 PGLYRP4Q96LB8 373 aa13.84□□□□□ -0.19
USP39-201ENST00000323701 ZNF138P52744 262 aa13.83□□□□□ -0.19
USP39-201ENST00000323701 VWFP04275 2813 aa13.83□□□□□ -0.2
USP39-201ENST00000323701 FBLL1A6NHQ2 334 aaKnown RBP13.83□□□□□ -0.2
USP39-201ENST00000323701 SNURFLB1AK76 121 aa13.83□□□□□ -0.2
USP39-201ENST00000323701 TMEM78Q5T7P6 136 aa13.83□□□□□ -0.2
USP39-201ENST00000323701 PRR9Q5T870 116 aa13.83□□□□□ -0.2
USP39-201ENST00000323701 TMEM136Q6ZRR5 245 aa13.83□□□□□ -0.2
USP39-201ENST00000323701 OR9G4Q8NGQ1 327 aa13.83□□□□□ -0.2
USP39-201ENST00000323701 TEP1Q99973 2627 aaKnown RBP13.82□□□□□ -0.2
USP39-201ENST00000323701 PROK1P58294 105 aa13.82□□□□□ -0.2
USP39-201ENST00000323701 OR4B1Q8NGF8 309 aa13.82□□□□□ -0.2
USP39-201ENST00000323701 CLEC5AQ9NY25 188 aa13.82□□□□□ -0.2
USP39-201ENST00000323701 RNF114Q9Y508 228 aa13.82□□□□□ -0.2
USP39-201ENST00000323701 ZNF688P0C7X2 276 aa13.82□□□□□ -0.2
USP39-201ENST00000323701 MRPL18Q9H0U6 180 aaKnown RBP13.82□□□□□ -0.2
USP39-201ENST00000323701 C11orf21Q9P2W6 132 aa13.82□□□□□ -0.2
USP39-201ENST00000323701 GRIFINA4D1Z8 144 aa13.81□□□□□ -0.2
USP39-201ENST00000323701 NDUFA7O95182 113 aa13.81□□□□□ -0.2
USP39-201ENST00000323701 KRTAP10-3P60369 221 aa13.81□□□□□ -0.2
USP39-201ENST00000323701 KIR3DS1Q14943 382 aa13.81□□□□□ -0.2
USP39-201ENST00000323701 TP53TG3Q9ULZ0 132 aa13.81□□□□□ -0.2
USP39-201ENST00000323701 AGRNO00468 2067 aa13.81□□□□□ -0.2
USP39-201ENST00000323701 CSN3P07498 182 aa13.81□□□□□ -0.2
USP39-201ENST00000323701 HIST1H1AQ02539 215 aaPredicted RBP13.81□□□□□ -0.2
USP39-201ENST00000323701 FHL3Q13643 280 aa13.81□□□□□ -0.2
USP39-201ENST00000323701 OR8A1Q8NGG7 326 aa13.81□□□□□ -0.2
USP39-201ENST00000323701 TMEM18Q96B42 140 aa13.81□□□□□ -0.2
USP39-201ENST00000323701 GNB1LQ9BYB4 327 aa13.81□□□□□ -0.2
USP39-201ENST00000323701 A0A1B0GXF2 115 aa13.8□□□□□ -0.2
USP39-201ENST00000323701 CYSRT1A8MQ03 144 aa13.8□□□□□ -0.2
USP39-201ENST00000323701 J3KRW8 73 aa13.8□□□□□ -0.2
USP39-201ENST00000323701 K7EQG2 157 aa13.8□□□□□ -0.2
USP39-201ENST00000323701 NDFIP1Q9BT67 221 aa13.8□□□□□ -0.2
USP39-201ENST00000323701 GFRA4Q9GZZ7 299 aa13.8□□□□□ -0.2
USP39-201ENST00000323701 ADARB2-AS1A8MUL3 147 aa13.79□□□□□ -0.2
USP39-201ENST00000323701 CCL24O00175 119 aa13.79□□□□□ -0.2
USP39-201ENST00000323701 BMI1P35226 326 aa13.79□□□□□ -0.2
USP39-201ENST00000323701 CAMPP49913 170 aa13.79□□□□□ -0.2
USP39-201ENST00000323701 RBPMS2Q6ZRY4 209 aaKnown RBP13.79□□□□□ -0.2
USP39-201ENST00000323701 JMJD8Q96S16 334 aa13.79□□□□□ -0.2
USP39-201ENST00000323701 SSBP4Q9BWG4 385 aaPredicted RBP13.79□□□□□ -0.2
USP39-201ENST00000323701 OVOL1O14753 267 aa13.79□□□□□ -0.2
USP39-201ENST00000323701 CD33P20138 364 aa13.79□□□□□ -0.2
USP39-201ENST00000323701 LINC00310P59036 64 aa13.79□□□□□ -0.2
USP39-201ENST00000323701 SLAQ13239 276 aa13.79□□□□□ -0.2
USP39-201ENST00000323701 KIAA1644Q3SXP7 199 aa13.79□□□□□ -0.2
USP39-201ENST00000323701 PSMG4Q5JS54 123 aa13.79□□□□□ -0.2
USP39-201ENST00000323701 OR10J6PQ8NGY7 276 aa13.79□□□□□ -0.2
USP39-201ENST00000323701 WFDC12Q8WWY7 111 aa13.79□□□□□ -0.2
USP39-201ENST00000323701 PPP1R14DQ9NXH3 145 aa13.79□□□□□ -0.2
USP39-201ENST00000323701 TSSC4Q9Y5U2 329 aaPredicted RBP13.79□□□□□ -0.2
USP39-201ENST00000323701 TMEM189A5PLL7 270 aa13.78□□□□□ -0.2
USP39-201ENST00000323701 EREGO14944 169 aa13.78□□□□□ -0.2
USP39-201ENST00000323701 FOXA3P55318 350 aaPredicted RBP13.78□□□□□ -0.2
USP39-201ENST00000323701 ZFAND2AQ8N6M9 145 aa13.78□□□□□ -0.2
USP39-201ENST00000323701 FAM231BA6NCW3 169 aa13.78□□□□□ -0.2
USP39-201ENST00000323701 TCF21O43680 179 aa13.78□□□□□ -0.2
USP39-201ENST00000323701 TMEM61Q8N0U2 210 aa13.78□□□□□ -0.2
USP39-201ENST00000323701 TPPP3Q9BW30 176 aa13.78□□□□□ -0.2
USP39-201ENST00000323701 MUC21A0A0G2JKD1 596 aa13.77□□□□□ -0.21
USP39-201ENST00000323701 MUC21A0A140T8X8 626 aa13.77□□□□□ -0.21
USP39-201ENST00000323701 FABP5P3A8MUU1 101 aa13.77□□□□□ -0.21
USP39-201ENST00000323701 CRLF1O75462 422 aa13.77□□□□□ -0.21
USP39-201ENST00000323701 ARMS2P0C7Q2 107 aa13.77□□□□□ -0.21
USP39-201ENST00000323701 IQCJQ1A5X6 159 aa13.77□□□□□ -0.21
USP39-201ENST00000323701 MUC21Q5SSG8 566 aa13.77□□□□□ -0.21
USP39-201ENST00000323701 FAM19A4Q96LR4 140 aa13.77□□□□□ -0.21
USP39-201ENST00000323701 LINC00477Q96M19 166 aa13.77□□□□□ -0.21
USP39-201ENST00000323701 IGKV3D-20A0A0C4DH25 116 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms