RNA–Protein interactions for RNA: ENST00000321356.8

CLK1-201, Transcript of CDC like kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK1, Length 1,888 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-201ENST00000321356 HIGD1BQ9P298 99 aa6.68□□□□□ -1.34
CLK1-201ENST00000321356 CACNA1BQ00975 2339 aa6.68□□□□□ -1.34
CLK1-201ENST00000321356 ATRXP46100 2492 aa6.68□□□□□ -1.34
CLK1-201ENST00000321356 IGHV4-4A0A075B6R2 117 aa6.68□□□□□ -1.34
CLK1-201ENST00000321356 IGKV2D-26A0A0A0MRZ7 120 aa6.68□□□□□ -1.34
CLK1-201ENST00000321356 IGHV7-4-1A0A0J9YVY3 117 aa6.68□□□□□ -1.34
CLK1-201ENST00000321356 GAGE10A6NGK3 116 aa6.68□□□□□ -1.34
CLK1-201ENST00000321356 EVI2AP22794 236 aa6.68□□□□□ -1.34
CLK1-201ENST00000321356 PPIFP30405 207 aaKnown RBP6.68□□□□□ -1.34
CLK1-201ENST00000321356 SAA4P35542 130 aa6.68□□□□□ -1.34
CLK1-201ENST00000321356 NMUP48645 174 aa6.68□□□□□ -1.34
CLK1-201ENST00000321356 KLRB1Q12918 225 aa6.68□□□□□ -1.34
CLK1-201ENST00000321356 CLEC19AQ6UXS0 136 aa6.68□□□□□ -1.34
CLK1-201ENST00000321356 C9orf47Q6ZRZ4 202 aa6.68□□□□□ -1.34
CLK1-201ENST00000321356 C8orf86Q6ZUL3 223 aa6.68□□□□□ -1.34
CLK1-201ENST00000321356 WFDC3Q8IUB2 231 aa6.68□□□□□ -1.34
CLK1-201ENST00000321356 NRACQ8N912 160 aa6.68□□□□□ -1.34
CLK1-201ENST00000321356 SMPXQ9UHP9 88 aa6.68□□□□□ -1.34
CLK1-201ENST00000321356 TRBV7-1A0A0A6YYK4 115 aa6.67□□□□□ -1.34
CLK1-201ENST00000321356 IGHV3-66A0A0C4DH42 116 aa6.67□□□□□ -1.34
CLK1-201ENST00000321356 CENPVL3A0A0U1RRI6 287 aa6.67□□□□□ -1.34
CLK1-201ENST00000321356 K7EP34 96 aa6.67□□□□□ -1.34
CLK1-201ENST00000321356 ATP5LO75964 103 aa6.67□□□□□ -1.34
CLK1-201ENST00000321356 TRGV3P03979 118 aa6.67□□□□□ -1.34
CLK1-201ENST00000321356 HLA-DRB4P13762 266 aa6.67□□□□□ -1.34
CLK1-201ENST00000321356 TCTAP57738 103 aa6.67□□□□□ -1.34
CLK1-201ENST00000321356 TMEM78Q5T7P6 136 aa6.67□□□□□ -1.34
CLK1-201ENST00000321356 GTF2H5Q6ZYL4 71 aa6.67□□□□□ -1.34
CLK1-201ENST00000321356 OR2K2Q8NGT1 345 aa6.67□□□□□ -1.34
CLK1-201ENST00000321356 TMEM158Q8WZ71 300 aa6.67□□□□□ -1.34
CLK1-201ENST00000321356 EEF1AKMT3Q96AZ1 226 aa6.67□□□□□ -1.34
CLK1-201ENST00000321356 ATP6V0BQ99437 205 aa6.67□□□□□ -1.34
CLK1-201ENST00000321356 HLA-DRB4X5D2U9 266 aa6.67□□□□□ -1.34
CLK1-201ENST00000321356 MED13LQ71F56 2210 aa6.67□□□□□ -1.34
CLK1-201ENST00000321356 A0A0G2JLM5 398 aa6.66□□□□□ -1.34
CLK1-201ENST00000321356 LINC01548A6NM66 108 aa6.66□□□□□ -1.34
CLK1-201ENST00000321356 G3V318 75 aa6.66□□□□□ -1.34
CLK1-201ENST00000321356 H3BUT2 72 aa6.66□□□□□ -1.34
CLK1-201ENST00000321356 IGKCP01834 107 aa6.66□□□□□ -1.34
CLK1-201ENST00000321356 RNF151Q2KHN1 245 aa6.66□□□□□ -1.34
CLK1-201ENST00000321356 C19orf54Q5BKX5 351 aa6.66□□□□□ -1.34
CLK1-201ENST00000321356 METTL26Q96S19 204 aa6.66□□□□□ -1.34
CLK1-201ENST00000321356 K7ERU9 68 aa6.66□□□□□ -1.34
CLK1-201ENST00000321356 DPM2O94777 84 aa6.66□□□□□ -1.34
CLK1-201ENST00000321356 PRSS1P07477 247 aa6.66□□□□□ -1.34
CLK1-201ENST00000321356 UCNP55089 124 aa6.66□□□□□ -1.34
CLK1-201ENST00000321356 LMO4P61968 165 aa6.66□□□□□ -1.34
CLK1-201ENST00000321356 C5orf56Q8N8D9 126 aa6.66□□□□□ -1.34
CLK1-201ENST00000321356 AP1S3Q96PC3 154 aa6.66□□□□□ -1.34
CLK1-201ENST00000321356 LENEPQ9Y5L5 61 aa6.66□□□□□ -1.34
CLK1-201ENST00000321356 SPTBN1Q01082 2364 aaKnown RBP6.65□□□□□ -1.34
CLK1-201ENST00000321356 IGHV3OR16-13A0A075B7E8 117 aa6.65□□□□□ -1.34
CLK1-201ENST00000321356 IGHV3-74A0A0B4J1X5 117 aa6.65□□□□□ -1.34
CLK1-201ENST00000321356 A0A1W2PPM0 123 aa6.65□□□□□ -1.34
CLK1-201ENST00000321356 SMIM17P0DL12 118 aa6.65□□□□□ -1.34
CLK1-201ENST00000321356 CRIP2P52943 208 aaPredicted RBP6.65□□□□□ -1.34
CLK1-201ENST00000321356 SMIM15Q7Z3B0 74 aa6.65□□□□□ -1.34
CLK1-201ENST00000321356 GLMPQ8WWB7 406 aa6.65□□□□□ -1.34
CLK1-201ENST00000321356 ITLN2Q8WWU7 325 aaPredicted RBP6.65□□□□□ -1.34
CLK1-201ENST00000321356 FOXC2Q99958 501 aa6.65□□□□□ -1.34
CLK1-201ENST00000321356 IGHV3-49A0A0A0MS15 119 aa6.64□□□□□ -1.35
CLK1-201ENST00000321356 NPFFO15130 113 aa6.64□□□□□ -1.35
CLK1-201ENST00000321356 EFNA4P52798 201 aa6.64□□□□□ -1.35
CLK1-201ENST00000321356 LAGE3Q14657 143 aa6.64□□□□□ -1.35
CLK1-201ENST00000321356 CHAC1Q9BUX1 264 aa6.64□□□□□ -1.35
CLK1-201ENST00000321356 HIVEP3Q5T1R4 2406 aa6.64□□□□□ -1.35
CLK1-201ENST00000321356 TRBV25-1A0A075B6N4 114 aa6.64□□□□□ -1.35
CLK1-201ENST00000321356 TMEM8BA6NDV4 472 aa6.64□□□□□ -1.35
CLK1-201ENST00000321356 FAM223BA6NKX1 122 aa6.64□□□□□ -1.35
CLK1-201ENST00000321356 ZNF207O43670 478 aaKnown RBP6.64□□□□□ -1.35
CLK1-201ENST00000321356 FXYD2P54710 66 aa6.64□□□□□ -1.35
CLK1-201ENST00000321356 ATP5G2Q06055 141 aa6.64□□□□□ -1.35
CLK1-201ENST00000321356 SRSF1Q07955 248 aaKnown RBP eCLIP6.64□□□□□ -1.352e-6■□□□□ 10.6
CLK1-201ENST00000321356 PRR9Q5T870 116 aa6.64□□□□□ -1.35
CLK1-201ENST00000321356 ZC2HC1BQ5TFG8 222 aa6.64□□□□□ -1.35
CLK1-201ENST00000321356 Q6ZQT7 251 aa6.64□□□□□ -1.35
CLK1-201ENST00000321356 C9orf139Q6ZV77 190 aa6.64□□□□□ -1.35
CLK1-201ENST00000321356 FAM223AQ8IWN6 122 aa6.64□□□□□ -1.35
CLK1-201ENST00000321356 OR5A1Q8NGJ0 315 aa6.64□□□□□ -1.35
CLK1-201ENST00000321356 MRAP2Q96G30 205 aa6.64□□□□□ -1.35
CLK1-201ENST00000321356 NAA38Q9BRA0 125 aaKnown RBP6.64□□□□□ -1.35
CLK1-201ENST00000321356 VPS25Q9BRG1 176 aa6.64□□□□□ -1.35
CLK1-201ENST00000321356 TM2D2Q9BX73 214 aa6.64□□□□□ -1.35
CLK1-201ENST00000321356 TTTY13Q9BZ97 58 aa6.64□□□□□ -1.35
CLK1-201ENST00000321356 MRPL35Q9NZE8 188 aaKnown RBP6.64□□□□□ -1.35
CLK1-201ENST00000321356 A0A087WX48 190 aa6.63□□□□□ -1.35
CLK1-201ENST00000321356 TRAV26-2A0A0B4J265 109 aa6.63□□□□□ -1.35
CLK1-201ENST00000321356 SMIM13P0DJ93 91 aa6.63□□□□□ -1.35
CLK1-201ENST00000321356 GTSCR1Q86UQ5 136 aa6.63□□□□□ -1.35
CLK1-201ENST00000321356 MYOZ3Q8TDC0 251 aa6.63□□□□□ -1.35
CLK1-201ENST00000321356 PHLDA1Q8WV24 401 aaPredicted RBP6.63□□□□□ -1.35
CLK1-201ENST00000321356 RAB37Q96AX2 223 aa6.63□□□□□ -1.35
CLK1-201ENST00000321356 RAXQ9Y2V3 346 aa6.63□□□□□ -1.35
CLK1-201ENST00000321356 UFC1Q9Y3C8 167 aa6.63□□□□□ -1.35
CLK1-201ENST00000321356 ABCA2Q9BZC7 2435 aa6.63□□□□□ -1.35
CLK1-201ENST00000321356 SVEP1Q4LDE5 3571 aa6.63□□□□□ -1.35
CLK1-201ENST00000321356 TRAV41A0A0B4J266 112 aa6.62□□□□□ -1.35
CLK1-201ENST00000321356 TRAV40A0A0B4J280 105 aa6.62□□□□□ -1.35
CLK1-201ENST00000321356 H3BVH4 76 aa6.62□□□□□ -1.35
CLK1-201ENST00000321356 SAP30O75446 220 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 105.4 ms