RNA–Protein interactions for RNA: ENST00000319420.3

SHISA2-201, Transcript of shisa family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA2, Length 2,860 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA2-201ENST00000319420 NIT1Q86X76 327 aa12.21□□□□□ -0.45
SHISA2-201ENST00000319420 PRR25Q96S07 402 aa12.21□□□□□ -0.45
SHISA2-201ENST00000319420 CR1P17927 2039 aa12.21□□□□□ -0.45
SHISA2-201ENST00000319420 ZNF324O75467 553 aaPredicted RBP12.21□□□□□ -0.45
SHISA2-201ENST00000319420 CFAP161Q6P656 301 aa12.21□□□□□ -0.45
SHISA2-201ENST00000319420 ATP5L2Q7Z4Y8 100 aa12.21□□□□□ -0.45
SHISA2-201ENST00000319420 GLMPQ8WWB7 406 aa12.21□□□□□ -0.45
SHISA2-201ENST00000319420 CSN3P07498 182 aa12.2□□□□□ -0.46
SHISA2-201ENST00000319420 PMCHL1Q16048 86 aa12.2□□□□□ -0.46
SHISA2-201ENST00000319420 Q8N976 141 aa12.2□□□□□ -0.46
SHISA2-201ENST00000319420 WFDC12Q8WWY7 111 aa12.2□□□□□ -0.46
SHISA2-201ENST00000319420 SERTM2A0A1B0GWG4 89 aa12.2□□□□□ -0.46
SHISA2-201ENST00000319420 PPBPP02775 128 aa12.2□□□□□ -0.46
SHISA2-201ENST00000319420 ZNF138P52744 262 aa12.2□□□□□ -0.46
SHISA2-201ENST00000319420 Q6ZVH6 145 aa12.2□□□□□ -0.46
SHISA2-201ENST00000319420 URB1-AS1Q96HZ7 61 aa12.2□□□□□ -0.46
SHISA2-201ENST00000319420 TRBV6-1A0A0K0K1D8 114 aa12.2□□□□□ -0.46
SHISA2-201ENST00000319420 RNASEKQ6P5S7 137 aaKnown RBP12.2□□□□□ -0.46
SHISA2-201ENST00000319420 CSTL1Q9H114 145 aa12.2□□□□□ -0.46
SHISA2-201ENST00000319420 TMEM189A5PLL7 270 aa12.19□□□□□ -0.46
SHISA2-201ENST00000319420 LOXL1Q08397 574 aaPredicted RBP12.19□□□□□ -0.46
SHISA2-201ENST00000319420 GFRA4Q9GZZ7 299 aa12.19□□□□□ -0.46
SHISA2-201ENST00000319420 NIPBLQ6KC79 2804 aaeCLIP12.19□□□□□ -0.46
SHISA2-201ENST00000319420 F6UB75 175 aa12.19□□□□□ -0.46
SHISA2-201ENST00000319420 NPFFR1Q9GZQ6 430 aa12.19□□□□□ -0.46
SHISA2-201ENST00000319420 BMI1P35226 326 aa12.18□□□□□ -0.46
SHISA2-201ENST00000319420 CLEC5AQ9NY25 188 aa12.18□□□□□ -0.46
SHISA2-201ENST00000319420 TRAV8-2A0A0B4J237 113 aa12.18□□□□□ -0.46
SHISA2-201ENST00000319420 TMEM213A2RRL7 107 aa12.18□□□□□ -0.46
SHISA2-201ENST00000319420 KHDC1LQ5JSQ8 128 aa12.18□□□□□ -0.46
SHISA2-201ENST00000319420 COL5A1-AS1Q5SY13 56 aa12.18□□□□□ -0.46
SHISA2-201ENST00000319420 FAM162BQ5T6X4 162 aa12.18□□□□□ -0.46
SHISA2-201ENST00000319420 ZNF738Q8NE65 137 aa12.18□□□□□ -0.46
SHISA2-201ENST00000319420 PAM16Q9Y3D7 125 aa12.18□□□□□ -0.46
SHISA2-201ENST00000319420 KMT2BQ9UMN6 2715 aaPredicted RBP12.17□□□□□ -0.46
SHISA2-201ENST00000319420 FAM181BA6NEQ2 426 aa12.17□□□□□ -0.46
SHISA2-201ENST00000319420 C3orf79P0CE67 100 aa12.17□□□□□ -0.46
SHISA2-201ENST00000319420 KLF5Q13887 457 aaPredicted RBP12.17□□□□□ -0.46
SHISA2-201ENST00000319420 LYZL1Q6UWQ5 148 aa12.17□□□□□ -0.46
SHISA2-201ENST00000319420 OR4B1Q8NGF8 309 aa12.17□□□□□ -0.46
SHISA2-201ENST00000319420 AGPAT4-IT1Q9H0P7 198 aa12.17□□□□□ -0.46
SHISA2-201ENST00000319420 A0A1B0GUT8 65 aa12.16□□□□□ -0.46
SHISA2-201ENST00000319420 SPRY2O43597 315 aa12.16□□□□□ -0.46
SHISA2-201ENST00000319420 C11orf44Q8N8P7 122 aa12.16□□□□□ -0.46
SHISA2-201ENST00000319420 C20orf173Q96LM9 149 aa12.16□□□□□ -0.46
SHISA2-201ENST00000319420 RHPN1-AS1Q9BWJ2 59 aa12.16□□□□□ -0.46
SHISA2-201ENST00000319420 KLK9Q2XQG4 91 aa12.16□□□□□ -0.46
SHISA2-201ENST00000319420 DEFB136Q30KP8 78 aa12.16□□□□□ -0.46
SHISA2-201ENST00000319420 TEX43Q6ZNM6 134 aa12.16□□□□□ -0.46
SHISA2-201ENST00000319420 USMG5Q96IX5 58 aa12.16□□□□□ -0.46
SHISA2-201ENST00000319420 KLK9Q9UKQ9 250 aa12.16□□□□□ -0.46
SHISA2-201ENST00000319420 LOC102724200A0A096LPH7 203 aaPredicted RBP12.16□□□□□ -0.46
SHISA2-201ENST00000319420 HSBP1O75506 76 aa12.16□□□□□ -0.46
SHISA2-201ENST00000319420 DUX3Q96PT4 197 aa12.16□□□□□ -0.46
SHISA2-201ENST00000319420 NDFIP1Q9BT67 221 aa12.16□□□□□ -0.46
SHISA2-201ENST00000319420 VPREB3Q9UKI3 123 aa12.16□□□□□ -0.46
SHISA2-201ENST00000319420 A0A0G2JLM5 398 aa12.15□□□□□ -0.46
SHISA2-201ENST00000319420 FAM231BA6NCW3 169 aa12.15□□□□□ -0.46
SHISA2-201ENST00000319420 HAX1O00165 279 aa12.15□□□□□ -0.46
SHISA2-201ENST00000319420 MRPL52Q86TS9 123 aaKnown RBP12.15□□□□□ -0.46
SHISA2-201ENST00000319420 IGLV1-40P01703 118 aa12.15□□□□□ -0.46
SHISA2-201ENST00000319420 TMEM78Q5T7P6 136 aa12.15□□□□□ -0.46
SHISA2-201ENST00000319420 PEF1Q9UBV8 284 aaKnown RBP12.15□□□□□ -0.46
SHISA2-201ENST00000319420 PDZD2O15018 2839 aa12.14□□□□□ -0.47
SHISA2-201ENST00000319420 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.14□□□□□ -0.47
SHISA2-201ENST00000319420 J3QLI3 93 aa12.14□□□□□ -0.47
SHISA2-201ENST00000319420 CRIP2P52943 208 aaPredicted RBP12.14□□□□□ -0.47
SHISA2-201ENST00000319420 ATOH7Q8N100 152 aa12.14□□□□□ -0.47
SHISA2-201ENST00000319420 STPG4Q8N801 248 aa12.14□□□□□ -0.47
SHISA2-201ENST00000319420 MSRB1Q9NZV6 116 aa12.14□□□□□ -0.47
SHISA2-201ENST00000319420 M0R2Z0 102 aa12.14□□□□□ -0.47
SHISA2-201ENST00000319420 NDUFA4O00483 81 aa12.14□□□□□ -0.47
SHISA2-201ENST00000319420 FOXE3Q13461 319 aa12.14□□□□□ -0.47
SHISA2-201ENST00000319420 EBLN2Q6P2I7 272 aa12.14□□□□□ -0.47
SHISA2-201ENST00000319420 ZNF575Q86XF7 245 aa12.14□□□□□ -0.47
SHISA2-201ENST00000319420 KRTAP1-3Q8IUG1 177 aa12.14□□□□□ -0.47
SHISA2-201ENST00000319420 MIEN1Q9BRT3 115 aa12.14□□□□□ -0.47
SHISA2-201ENST00000319420 PLA2G2AP14555 144 aa12.13□□□□□ -0.47
SHISA2-201ENST00000319420 C18orf65Q6ZTR6 163 aa12.13□□□□□ -0.47
SHISA2-201ENST00000319420 SLC50A1Q9BRV3 221 aa12.13□□□□□ -0.47
SHISA2-201ENST00000319420 J3QKU1 62 aa12.13□□□□□ -0.47
SHISA2-201ENST00000319420 SYNJ2BPP57105 145 aa12.13□□□□□ -0.47
SHISA2-201ENST00000319420 KIR3DS1Q14943 382 aa12.13□□□□□ -0.47
SHISA2-201ENST00000319420 TWIST1Q15672 202 aa12.13□□□□□ -0.47
SHISA2-201ENST00000319420 LOC389332A0A1B0GUA5 103 aa12.12□□□□□ -0.47
SHISA2-201ENST00000319420 A6NJY4 79 aa12.12□□□□□ -0.47
SHISA2-201ENST00000319420 H0Y8G0 127 aa12.12□□□□□ -0.47
SHISA2-201ENST00000319420 IGKV3-20P01619 116 aa12.12□□□□□ -0.47
SHISA2-201ENST00000319420 PSMB8P28062 276 aa12.12□□□□□ -0.47
SHISA2-201ENST00000319420 HIST1H1AQ02539 215 aaPredicted RBP12.12□□□□□ -0.47
SHISA2-201ENST00000319420 LINC00173Q6ZV60 143 aa12.12□□□□□ -0.47
SHISA2-201ENST00000319420 BORCS7Q96B45 105 aa12.12□□□□□ -0.47
SHISA2-201ENST00000319420 UBE2V1Q13404 147 aa12.12□□□□□ -0.47
SHISA2-201ENST00000319420 SPATA12Q7Z6I5 190 aa12.12□□□□□ -0.47
SHISA2-201ENST00000319420 GPHB5Q86YW7 130 aa12.12□□□□□ -0.47
SHISA2-201ENST00000319420 AMN1Q8IY45 258 aa12.12□□□□□ -0.47
SHISA2-201ENST00000319420 DAZ1Q9NQZ3 744 aaKnown RBP12.12□□□□□ -0.47
SHISA2-201ENST00000319420 SMKR1H3BMG3 65 aa12.12□□□□□ -0.47
SHISA2-201ENST00000319420 Q6YL49 198 aa12.12□□□□□ -0.47
SHISA2-201ENST00000319420 TMEM190Q8WZ59 177 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms