RNA–Protein interactions for RNA: ENST00000318607.9

PABPC1-201, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PABPC1, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-201ENST00000318607 ZNF292O60281 2723 aa11.14□□□□□ -0.63
PABPC1-201ENST00000318607 IGKCP01834 107 aa11.14□□□□□ -0.63
PABPC1-201ENST00000318607 MAPKAPK5-AS1Q8N8E1 139 aa11.14□□□□□ -0.63
PABPC1-201ENST00000318607 TNFRSF6BO95407 300 aa11.14□□□□□ -0.63
PABPC1-201ENST00000318607 APOBEC3AP31941 199 aaPredicted RBP11.13□□□□□ -0.63
PABPC1-201ENST00000318607 GFRALQ6UXV0 394 aa11.13□□□□□ -0.63
PABPC1-201ENST00000318607 IL17RELQ6ZVW7 336 aa11.13□□□□□ -0.63
PABPC1-201ENST00000318607 MYOZ3Q8TDC0 251 aa11.13□□□□□ -0.63
PABPC1-201ENST00000318607 SCGB2A1O75556 95 aa11.13□□□□□ -0.63
PABPC1-201ENST00000318607 PSMB2P49721 201 aa11.13□□□□□ -0.63
PABPC1-201ENST00000318607 FTH1P19P0C7X4 201 aa11.12□□□□□ -0.63
PABPC1-201ENST00000318607 SMIM17P0DL12 118 aa11.12□□□□□ -0.63
PABPC1-201ENST00000318607 S100A4P26447 101 aaKnown RBP11.12□□□□□ -0.63
PABPC1-201ENST00000318607 IGHV3-64A0A075B6Q5 118 aa11.12□□□□□ -0.63
PABPC1-201ENST00000318607 GAGE12HA6NDE8 117 aa11.12□□□□□ -0.63
PABPC1-201ENST00000318607 PRR30Q53SZ7 412 aaPredicted RBP11.12□□□□□ -0.63
PABPC1-201ENST00000318607 SHANK2-AS3Q9BTD1 123 aa11.12□□□□□ -0.63
PABPC1-201ENST00000318607 GFRA4Q9GZZ7 299 aa11.12□□□□□ -0.63
PABPC1-201ENST00000318607 MRPL16Q9NX20 251 aaKnown RBP11.12□□□□□ -0.63
PABPC1-201ENST00000318607 PRRG2O14669 202 aa11.12□□□□□ -0.63
PABPC1-201ENST00000318607 ATP5IP56385 69 aaPredicted RBP11.12□□□□□ -0.63
PABPC1-201ENST00000318607 CT83Q5H943 113 aa11.12□□□□□ -0.63
PABPC1-201ENST00000318607 OR4X2Q8NGF9 303 aa11.12□□□□□ -0.63
PABPC1-201ENST00000318607 RNASE6Q93091 150 aaKnown RBP11.12□□□□□ -0.63
PABPC1-201ENST00000318607 C20orf78Q9BR46 151 aa11.12□□□□□ -0.63
PABPC1-201ENST00000318607 SCGB1C2P0DMR2 95 aa11.11□□□□□ -0.63
PABPC1-201ENST00000318607 CD300EQ496F6 205 aaPredicted RBP11.11□□□□□ -0.63
PABPC1-201ENST00000318607 ABHD17AQ96GS6 310 aa11.11□□□□□ -0.63
PABPC1-201ENST00000318607 CCDC168Q8NDH2 2452 aa11.11□□□□□ -0.63
PABPC1-201ENST00000318607 K7EIM0 57 aa11.11□□□□□ -0.63
PABPC1-201ENST00000318607 UFSP1Q6NVU6 142 aa11.11□□□□□ -0.63
PABPC1-201ENST00000318607 TEX22C9J3V5 150 aa11.11□□□□□ -0.63
PABPC1-201ENST00000318607 RPL7P18124 248 aaKnown RBP11.11□□□□□ -0.63
PABPC1-201ENST00000318607 SRD5A1P18405 259 aa11.11□□□□□ -0.63
PABPC1-201ENST00000318607 OR9G4Q8NGQ1 327 aa11.11□□□□□ -0.63
PABPC1-201ENST00000318607 PRR25Q96S07 402 aa11.11□□□□□ -0.63
PABPC1-201ENST00000318607 BEX4Q9NWD9 120 aaPredicted RBP11.11□□□□□ -0.63
PABPC1-201ENST00000318607 RBPJQ06330 500 aa11.1□□□□□ -0.63
PABPC1-201ENST00000318607 LGALS9BQ3B8N2 356 aa11.1□□□□□ -0.63
PABPC1-201ENST00000318607 LGALS9CQ6DKI2 356 aa11.1□□□□□ -0.63
PABPC1-201ENST00000318607 SMIM20Q8N5G0 67 aa11.1□□□□□ -0.63
PABPC1-201ENST00000318607 KLHL30-AS1Q8NEE0 82 aa11.1□□□□□ -0.63
PABPC1-201ENST00000318607 BUB1B-PAK6H3BSN5 160 aa11.1□□□□□ -0.63
PABPC1-201ENST00000318607 BRI3O95415 125 aa11.1□□□□□ -0.63
PABPC1-201ENST00000318607 DYNAPQ8N1N2 210 aa11.1□□□□□ -0.63
PABPC1-201ENST00000318607 DTX2Q86UW9 622 aa11.1□□□□□ -0.63
PABPC1-201ENST00000318607 C21orf62Q9NYP8 219 aa11.1□□□□□ -0.63
PABPC1-201ENST00000318607 A0A0G2JNJ9 132 aa11.09□□□□□ -0.63
PABPC1-201ENST00000318607 I3L2K1 104 aa11.09□□□□□ -0.63
PABPC1-201ENST00000318607 J3QR89 54 aa11.09□□□□□ -0.63
PABPC1-201ENST00000318607 DPM2O94777 84 aa11.09□□□□□ -0.63
PABPC1-201ENST00000318607 Q9UFV3 132 aa11.09□□□□□ -0.63
PABPC1-201ENST00000318607 JMJD1CQ15652 2540 aa11.09□□□□□ -0.63
PABPC1-201ENST00000318607 GATA4P43694 442 aa11.09□□□□□ -0.63
PABPC1-201ENST00000318607 GAGE13Q4V321 117 aa11.09□□□□□ -0.63
PABPC1-201ENST00000318607 TTC9CQ8N5M4 171 aa11.09□□□□□ -0.63
PABPC1-201ENST00000318607 PIMREGQ9BSJ6 248 aa11.09□□□□□ -0.63
PABPC1-201ENST00000318607 HLA-DRB4P13762 266 aa11.08□□□□□ -0.64
PABPC1-201ENST00000318607 CKS1BP61024 79 aa11.08□□□□□ -0.64
PABPC1-201ENST00000318607 OR5A1Q8NGJ0 315 aa11.08□□□□□ -0.64
PABPC1-201ENST00000318607 SPAG8Q99932 426 aaPredicted RBP11.08□□□□□ -0.64
PABPC1-201ENST00000318607 PGPEP1Q9NXJ5 209 aa11.08□□□□□ -0.64
PABPC1-201ENST00000318607 HLA-DRB4X5D2U9 266 aa11.08□□□□□ -0.64
PABPC1-201ENST00000318607 IGKV3-20P01619 116 aa11.08□□□□□ -0.64
PABPC1-201ENST00000318607 MFAP4P55083 255 aa11.08□□□□□ -0.64
PABPC1-201ENST00000318607 TMEM155Q4W5P6 130 aa11.08□□□□□ -0.64
PABPC1-201ENST00000318607 CLEC19AQ6UXS0 136 aa11.08□□□□□ -0.64
PABPC1-201ENST00000318607 ZNF562Q6V9R5 426 aa11.08□□□□□ -0.64
PABPC1-201ENST00000318607 F5H697 171 aa11.08□□□□□ -0.64
PABPC1-201ENST00000318607 HTN1P15515 57 aa11.08□□□□□ -0.64
PABPC1-201ENST00000318607 MRGPRG-AS1Q2M3A8 158 aa11.08□□□□□ -0.64
PABPC1-201ENST00000318607 TEX36Q5VZQ5 186 aa11.08□□□□□ -0.64
PABPC1-201ENST00000318607 GRNP28799 593 aaKnown RBP11.07□□□□□ -0.64
PABPC1-201ENST00000318607 CFHR4Q92496 578 aa11.07□□□□□ -0.64
PABPC1-201ENST00000318607 MBD3L4A6NDZ8 208 aaPredicted RBP11.07□□□□□ -0.64
PABPC1-201ENST00000318607 MBD3L3A6NE82 208 aaPredicted RBP11.07□□□□□ -0.64
PABPC1-201ENST00000318607 MBD3L5A6NJ08 208 aaPredicted RBP11.07□□□□□ -0.64
PABPC1-201ENST00000318607 MBD3L2Q8NHZ7 208 aaPredicted RBP11.07□□□□□ -0.64
PABPC1-201ENST00000318607 OR11H12B2RN74 326 aa11.07□□□□□ -0.64
PABPC1-201ENST00000318607 E7EQL1 145 aa11.07□□□□□ -0.64
PABPC1-201ENST00000318607 IGF1P05019 195 aa11.07□□□□□ -0.64
PABPC1-201ENST00000318607 CRYGCP07315 174 aa11.07□□□□□ -0.64
PABPC1-201ENST00000318607 C14orf178Q8N769 122 aaPredicted RBP11.07□□□□□ -0.64
PABPC1-201ENST00000318607 OR11H1Q8NG94 326 aa11.07□□□□□ -0.64
PABPC1-201ENST00000318607 OR11H2Q8NH07 326 aa11.07□□□□□ -0.64
PABPC1-201ENST00000318607 SYT8Q8NBV8 401 aa11.06□□□□□ -0.64
PABPC1-201ENST00000318607 H3BRN7 92 aa11.06□□□□□ -0.64
PABPC1-201ENST00000318607 C12orf74Q32Q52 190 aa11.06□□□□□ -0.64
PABPC1-201ENST00000318607 LINC01549A6NIU2 74 aa11.05□□□□□ -0.64
PABPC1-201ENST00000318607 FABP5P3A8MUU1 101 aa11.05□□□□□ -0.64
PABPC1-201ENST00000318607 IGLL5B9A064 214 aa11.05□□□□□ -0.64
PABPC1-201ENST00000318607 G3V318 75 aa11.05□□□□□ -0.64
PABPC1-201ENST00000318607 SCGB3A1Q96QR1 104 aa11.05□□□□□ -0.64
PABPC1-201ENST00000318607 HIVEP3Q5T1R4 2406 aa11.05□□□□□ -0.64
PABPC1-201ENST00000318607 WI2-2373I1.2A0A1W2PRP0 233 aa11.05□□□□□ -0.64
PABPC1-201ENST00000318607 LINC01548A6NM66 108 aa11.05□□□□□ -0.64
PABPC1-201ENST00000318607 NBR2O15453 112 aa11.05□□□□□ -0.64
PABPC1-201ENST00000318607 FAM74A4Q5TZK3 123 aa11.05□□□□□ -0.64
PABPC1-201ENST00000318607 CEND1Q8N111 149 aa11.05□□□□□ -0.64
PABPC1-201ENST00000318607 ZFYVE26Q68DK2 2539 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms