RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 GAGE4Q13068 117 aa3.71□□□□□ -1.82
PTPN13-201ENST00000316707 MRPL23Q16540 153 aaKnown RBP3.71□□□□□ -1.82
PTPN13-201ENST00000316707 LYPD2Q6UXB3 125 aa3.71□□□□□ -1.82
PTPN13-201ENST00000316707 SBSPONQ8IVN8 264 aa3.71□□□□□ -1.82
PTPN13-201ENST00000316707 TOMM6Q96B49 74 aa3.71□□□□□ -1.82
PTPN13-201ENST00000316707 FANCD2OSQ96PS1 177 aa3.71□□□□□ -1.82
PTPN13-201ENST00000316707 GVINP1Q7Z2Y8 2422 aa3.71□□□□□ -1.82
PTPN13-201ENST00000316707 Q6Q795 121 aa3.7□□□□□ -1.82
PTPN13-201ENST00000316707 C1orf122Q6ZSJ8 110 aa3.7□□□□□ -1.82
PTPN13-201ENST00000316707 TMEM141Q96I45 108 aa3.7□□□□□ -1.82
PTPN13-201ENST00000316707 RUSC1-AS1Q66K80 236 aa3.7□□□□□ -1.82
PTPN13-201ENST00000316707 VKORC1Q9BQB6 163 aa3.7□□□□□ -1.82
PTPN13-201ENST00000316707 CENPVL3A0A0U1RRI6 287 aa3.7□□□□□ -1.82
PTPN13-201ENST00000316707 ZNF688P0C7X2 276 aa3.7□□□□□ -1.82
PTPN13-201ENST00000316707 HES1Q14469 280 aa3.7□□□□□ -1.82
PTPN13-201ENST00000316707 CDIP1Q9H305 208 aa3.7□□□□□ -1.82
PTPN13-201ENST00000316707 PRO1854Q9UHT4 67 aa3.7□□□□□ -1.82
PTPN13-201ENST00000316707 LY6LH3BQJ8 138 aa3.7□□□□□ -1.82
PTPN13-201ENST00000316707 M0R1W7 72 aa3.7□□□□□ -1.82
PTPN13-201ENST00000316707 SRD5A1P18405 259 aa3.7□□□□□ -1.82
PTPN13-201ENST00000316707 CNTFRP26992 372 aa3.7□□□□□ -1.82
PTPN13-201ENST00000316707 GLMPQ8WWB7 406 aa3.7□□□□□ -1.82
PTPN13-201ENST00000316707 CACNA1HO95180 2353 aa3.7□□□□□ -1.82
PTPN13-201ENST00000316707 PRTN3P24158 256 aa3.7□□□□□ -1.82
PTPN13-201ENST00000316707 NRACQ8N912 160 aa3.7□□□□□ -1.82
PTPN13-201ENST00000316707 LINC00477Q96M19 166 aa3.7□□□□□ -1.82
PTPN13-201ENST00000316707 KIR2DL4Q99706 377 aa3.7□□□□□ -1.82
PTPN13-201ENST00000316707 ADAMTS20P59510 1910 aa3.7□□□□□ -1.82
PTPN13-201ENST00000316707 NAV3Q8IVL0 2385 aa3.7□□□□□ -1.82
PTPN13-201ENST00000316707 KLK9Q2XQG4 91 aa3.7□□□□□ -1.82
PTPN13-201ENST00000316707 NDUFA11Q86Y39 141 aa3.7□□□□□ -1.82
PTPN13-201ENST00000316707 TIMM17AQ99595 171 aa3.7□□□□□ -1.82
PTPN13-201ENST00000316707 KLK9Q9UKQ9 250 aa3.7□□□□□ -1.82
PTPN13-201ENST00000316707 PCNTO95613 3336 aa3.69□□□□□ -1.82
PTPN13-201ENST00000316707 TRAV21A0A0B4J279 112 aa3.69□□□□□ -1.82
PTPN13-201ENST00000316707 PRSS29PA6NIE9 313 aa3.69□□□□□ -1.82
PTPN13-201ENST00000316707 OVOL1O14753 267 aa3.69□□□□□ -1.82
PTPN13-201ENST00000316707 BSPH1Q075Z2 132 aa3.69□□□□□ -1.82
PTPN13-201ENST00000316707 ERCC8Q13216 396 aa3.69□□□□□ -1.82
PTPN13-201ENST00000316707 PLA2G2CQ5R387 149 aa3.69□□□□□ -1.82
PTPN13-201ENST00000316707 MINOS1Q5TGZ0 78 aa3.69□□□□□ -1.82
PTPN13-201ENST00000316707 FAM110DQ8TAY7 271 aaPredicted RBP3.69□□□□□ -1.82
PTPN13-201ENST00000316707 MINOS1-NBL1R4GNA1 71 aa3.69□□□□□ -1.82
PTPN13-201ENST00000316707 BUB3O43684 328 aa3.69□□□□□ -1.82
PTPN13-201ENST00000316707 IGHV4OR15-8A0A075B7B6 117 aa3.69□□□□□ -1.82
PTPN13-201ENST00000316707 A0A087WW49 117 aa3.69□□□□□ -1.82
PTPN13-201ENST00000316707 COX6CP09669 75 aa3.69□□□□□ -1.82
PTPN13-201ENST00000316707 XGP55808 180 aa3.69□□□□□ -1.82
PTPN13-201ENST00000316707 EBI3Q14213 229 aa3.69□□□□□ -1.82
PTPN13-201ENST00000316707 DEFB109BQ30KR1 87 aa3.69□□□□□ -1.82
PTPN13-201ENST00000316707 IGF2-ASQ6U949 168 aa3.69□□□□□ -1.82
PTPN13-201ENST00000316707 DYNAPQ8N1N2 210 aa3.69□□□□□ -1.82
PTPN13-201ENST00000316707 ARHGAP21Q5T5U3 1957 aa3.69□□□□□ -1.82
PTPN13-201ENST00000316707 PCNX2A6NKB5 2137 aa3.69□□□□□ -1.82
PTPN13-201ENST00000316707 CD3EP07766 207 aa3.69□□□□□ -1.82
PTPN13-201ENST00000316707 GATA1P15976 413 aaPredicted RBP3.69□□□□□ -1.82
PTPN13-201ENST00000316707 PSMB2P49721 201 aa3.69□□□□□ -1.82
PTPN13-201ENST00000316707 C9orf47Q6ZRZ4 202 aa3.69□□□□□ -1.82
PTPN13-201ENST00000316707 PRSS33Q8NF86 280 aa3.69□□□□□ -1.82
PTPN13-201ENST00000316707 METTL26Q96S19 204 aa3.69□□□□□ -1.82
PTPN13-201ENST00000316707 IGKV3D-20A0A0C4DH25 116 aa3.69□□□□□ -1.82
PTPN13-201ENST00000316707 TTC32Q5I0X7 151 aa3.69□□□□□ -1.82
PTPN13-201ENST00000316707 MT-ATP8P03928 68 aa3.69□□□□□ -1.82
PTPN13-201ENST00000316707 DLX1P56177 255 aa3.69□□□□□ -1.82
PTPN13-201ENST00000316707 PMVKQ15126 192 aa3.69□□□□□ -1.82
PTPN13-201ENST00000316707 CREBBPQ92793 2442 aa3.68□□□□□ -1.82
PTPN13-201ENST00000316707 EFNA4P52798 201 aa3.68□□□□□ -1.82
PTPN13-201ENST00000316707 Q71RC1 249 aaPredicted RBP3.68□□□□□ -1.82
PTPN13-201ENST00000316707 SLC25A29Q8N8R3 303 aa3.68□□□□□ -1.82
PTPN13-201ENST00000316707 CFHR4Q92496 578 aa3.68□□□□□ -1.82
PTPN13-201ENST00000316707 LINC01600Q96MT4 127 aa3.68□□□□□ -1.82
PTPN13-201ENST00000316707 SPANXCQ9NY87 97 aa3.68□□□□□ -1.82
PTPN13-201ENST00000316707 ZNF318Q5VUA4 2279 aa3.68□□□□□ -1.82
PTPN13-201ENST00000316707 VCYO14598 125 aa3.68□□□□□ -1.82
PTPN13-201ENST00000316707 LGALS3P17931 250 aaKnown RBP3.68□□□□□ -1.82
PTPN13-201ENST00000316707 INSL3P51460 131 aa3.68□□□□□ -1.82
PTPN13-201ENST00000316707 PHLDA3Q9Y5J5 127 aa3.68□□□□□ -1.82
PTPN13-201ENST00000316707 TRIOBPQ9H2D6 2365 aa3.68□□□□□ -1.82
PTPN13-201ENST00000316707 A0A0J9YY99 117 aa3.68□□□□□ -1.82
PTPN13-201ENST00000316707 SLC25A20O43772 301 aa3.68□□□□□ -1.82
PTPN13-201ENST00000316707 CFC1BP0CG36 223 aa3.68□□□□□ -1.82
PTPN13-201ENST00000316707 CFC1P0CG37 223 aa3.68□□□□□ -1.82
PTPN13-201ENST00000316707 LY6G5BQ8NDX9 201 aa3.68□□□□□ -1.82
PTPN13-201ENST00000316707 OR10J6PQ8NGY7 276 aa3.68□□□□□ -1.82
PTPN13-201ENST00000316707 PLEKHB2Q96CS7 222 aa3.68□□□□□ -1.82
PTPN13-201ENST00000316707 ONECUT1Q9UBC0 465 aa3.68□□□□□ -1.82
PTPN13-201ENST00000316707 MALRD1Q5VYJ5 2156 aa3.68□□□□□ -1.82
PTPN13-201ENST00000316707 CHD7Q9P2D1 2997 aa3.68□□□□□ -1.82
PTPN13-201ENST00000316707 RHODO00212 210 aa3.68□□□□□ -1.82
PTPN13-201ENST00000316707 IGHG4P01861 327 aa3.68□□□□□ -1.82
PTPN13-201ENST00000316707 P0DMU3 169 aa3.68□□□□□ -1.82
PTPN13-201ENST00000316707 FAM231AP0DMU4 169 aa3.68□□□□□ -1.82
PTPN13-201ENST00000316707 FAM231CP0DMU5 169 aa3.68□□□□□ -1.82
PTPN13-201ENST00000316707 PPIFP30405 207 aaKnown RBP3.68□□□□□ -1.82
PTPN13-201ENST00000316707 CENPFP49454 3210 aa3.68□□□□□ -1.82
PTPN13-201ENST00000316707 SPAARA0A1B0GVQ0 90 aa3.68□□□□□ -1.82
PTPN13-201ENST00000316707 C11orf86A6NJI1 115 aa3.68□□□□□ -1.82
PTPN13-201ENST00000316707 COX6B1P14854 86 aa3.68□□□□□ -1.82
PTPN13-201ENST00000316707 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.68□□□□□ -1.82
PTPN13-201ENST00000316707 EEF1AKMT3Q96AZ1 226 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms