RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 RAB5BP61020 215 aa2.72□□□□□ -1.97
SMCO3-201ENST00000316048 LYZP61626 148 aa2.72□□□□□ -1.97
SMCO3-201ENST00000316048 EBI3Q14213 229 aa2.72□□□□□ -1.97
SMCO3-201ENST00000316048 FXYD3Q14802 87 aa2.72□□□□□ -1.97
SMCO3-201ENST00000316048 GCSAMLQ5JQS6 135 aa2.72□□□□□ -1.97
SMCO3-201ENST00000316048 C10orf55Q5SWW7 151 aa2.72□□□□□ -1.97
SMCO3-201ENST00000316048 C10orf113Q5VZT2 155 aa2.72□□□□□ -1.97
SMCO3-201ENST00000316048 HCP5Q6MZN7 132 aa2.72□□□□□ -1.97
SMCO3-201ENST00000316048 NECAP1Q8NC96 275 aa2.72□□□□□ -1.97
SMCO3-201ENST00000316048 ARL2-SNX15V9GYD0 113 aa2.72□□□□□ -1.97
SMCO3-201ENST00000316048 DIDO1Q9BTC0 2240 aaKnown RBP2.72□□□□□ -1.97
SMCO3-201ENST00000316048 DMXL2Q8TDJ6 3036 aa2.71□□□□□ -1.98
SMCO3-201ENST00000316048 DOCK11Q5JSL3 2073 aa2.71□□□□□ -1.98
SMCO3-201ENST00000316048 IGKV1OR2-108A0A075B7D4 117 aa2.71□□□□□ -1.98
SMCO3-201ENST00000316048 TRAV30A0A087WSZ9 112 aa2.71□□□□□ -1.98
SMCO3-201ENST00000316048 SMKR1H3BMG3 65 aa2.71□□□□□ -1.98
SMCO3-201ENST00000316048 COX7A2P2O60397 106 aa2.71□□□□□ -1.98
SMCO3-201ENST00000316048 OR7C2O60412 319 aa2.71□□□□□ -1.98
SMCO3-201ENST00000316048 PPBPP02775 128 aa2.71□□□□□ -1.98
SMCO3-201ENST00000316048 CRYBA1P05813 215 aa2.71□□□□□ -1.98
SMCO3-201ENST00000316048 OR5G3P0C626 314 aa2.71□□□□□ -1.98
SMCO3-201ENST00000316048 RAB5AP20339 215 aa2.71□□□□□ -1.98
SMCO3-201ENST00000316048 CRYBA4P53673 196 aa2.71□□□□□ -1.98
SMCO3-201ENST00000316048 RANP62826 216 aaKnown RBP2.71□□□□□ -1.98
SMCO3-201ENST00000316048 KLRD1Q13241 179 aa2.71□□□□□ -1.98
SMCO3-201ENST00000316048 MIR17HGQ75NE6 70 aa2.71□□□□□ -1.98
SMCO3-201ENST00000316048 FAM24BQ8N5W8 94 aa2.71□□□□□ -1.98
SMCO3-201ENST00000316048 OR4X1Q8NH49 305 aa2.71□□□□□ -1.98
SMCO3-201ENST00000316048 TRGV9Q99603 122 aa2.71□□□□□ -1.98
SMCO3-201ENST00000316048 DOK5Q9P104 306 aa2.71□□□□□ -1.98
SMCO3-201ENST00000316048 DCHS1Q96JQ0 3298 aa2.71□□□□□ -1.98
SMCO3-201ENST00000316048 CEP295Q9C0D2 2601 aa2.71□□□□□ -1.98
SMCO3-201ENST00000316048 LAMA5O15230 3695 aa2.71□□□□□ -1.98
SMCO3-201ENST00000316048 SPENQ96T58 3664 aaKnown RBP2.71□□□□□ -1.98
SMCO3-201ENST00000316048 MAP1BP46821 2468 aaKnown RBP2.71□□□□□ -1.98
SMCO3-201ENST00000316048 DSPP15924 2871 aaKnown RBP2.71□□□□□ -1.98
SMCO3-201ENST00000316048 A0A1W2PRE2 83 aa2.71□□□□□ -1.98
SMCO3-201ENST00000316048 PEX7O00628 323 aa2.71□□□□□ -1.98
SMCO3-201ENST00000316048 NPFFO15130 113 aa2.71□□□□□ -1.98
SMCO3-201ENST00000316048 TGOLN2O43493 480 aa2.71□□□□□ -1.98
SMCO3-201ENST00000316048 HYPMO75409 117 aa2.71□□□□□ -1.98
SMCO3-201ENST00000316048 APELAP0DMC3 54 aa2.71□□□□□ -1.98
SMCO3-201ENST00000316048 COX6B1P14854 86 aa2.71□□□□□ -1.98
SMCO3-201ENST00000316048 CD24P25063 80 aa2.71□□□□□ -1.98
SMCO3-201ENST00000316048 S100PP25815 95 aa2.71□□□□□ -1.98
SMCO3-201ENST00000316048 RPL23P62829 140 aaKnown RBP2.71□□□□□ -1.98
SMCO3-201ENST00000316048 ZNF90Q03938 601 aa2.71□□□□□ -1.98
SMCO3-201ENST00000316048 ADIRFQ15847 76 aa2.71□□□□□ -1.98
SMCO3-201ENST00000316048 LDLRAD2Q5SZI1 272 aa2.71□□□□□ -1.98
SMCO3-201ENST00000316048 OR51G1Q8NGK1 321 aa2.71□□□□□ -1.98
SMCO3-201ENST00000316048 C10orf105Q8TEF2 133 aa2.71□□□□□ -1.98
SMCO3-201ENST00000316048 HIST1H2BAQ96A08 127 aa2.71□□□□□ -1.98
SMCO3-201ENST00000316048 ISOC2Q96AB3 205 aa2.71□□□□□ -1.98
SMCO3-201ENST00000316048 RNF185Q96GF1 192 aa2.71□□□□□ -1.98
SMCO3-201ENST00000316048 BTF3L4Q96K17 158 aa2.71□□□□□ -1.98
SMCO3-201ENST00000316048 BIN3Q9NQY0 253 aa2.71□□□□□ -1.98
SMCO3-201ENST00000316048 TLN1Q9Y490 2541 aaKnown RBP2.71□□□□□ -1.98
SMCO3-201ENST00000316048 BOD1L1Q8NFC6 3051 aa2.7□□□□□ -1.98
SMCO3-201ENST00000316048 IGF2RP11717 2491 aa2.7□□□□□ -1.98
SMCO3-201ENST00000316048 IGKV1D-37A0A075B6S9 117 aa2.7□□□□□ -1.98
SMCO3-201ENST00000316048 CENPVL3A0A0U1RRI6 287 aa2.7□□□□□ -1.98
SMCO3-201ENST00000316048 I3L2K1 104 aa2.7□□□□□ -1.98
SMCO3-201ENST00000316048 K7EN84 100 aa2.7□□□□□ -1.98
SMCO3-201ENST00000316048 PRB1P04280 392 aa2.7□□□□□ -1.98
SMCO3-201ENST00000316048 CD99P14209 185 aa2.7□□□□□ -1.98
SMCO3-201ENST00000316048 HIST1H1BP16401 226 aaKnown RBP2.7□□□□□ -1.98
SMCO3-201ENST00000316048 ORM2P19652 201 aa2.7□□□□□ -1.98
SMCO3-201ENST00000316048 S100A7P31151 101 aa2.7□□□□□ -1.98
SMCO3-201ENST00000316048 RPS10P46783 165 aaKnown RBP2.7□□□□□ -1.98
SMCO3-201ENST00000316048 ATP5G3P48201 142 aa2.7□□□□□ -1.98
SMCO3-201ENST00000316048 ELOBQ15370 118 aa2.7□□□□□ -1.98
SMCO3-201ENST00000316048 SPATA31B1PQ5VZV4 182 aa2.7□□□□□ -1.98
SMCO3-201ENST00000316048 LINC00305Q7Z4B0 112 aa2.7□□□□□ -1.98
SMCO3-201ENST00000316048 DYNAPQ8N1N2 210 aa2.7□□□□□ -1.98
SMCO3-201ENST00000316048 TTC9CQ8N5M4 171 aa2.7□□□□□ -1.98
SMCO3-201ENST00000316048 Q8N6K4 173 aa2.7□□□□□ -1.98
SMCO3-201ENST00000316048 PTH2Q96A98 100 aa2.7□□□□□ -1.98
SMCO3-201ENST00000316048 LY96Q9Y6Y9 160 aa2.7□□□□□ -1.98
SMCO3-201ENST00000316048 ATMQ13315 3056 aa2.7□□□□□ -1.98
SMCO3-201ENST00000316048 BSNQ9UPA5 3926 aa2.7□□□□□ -1.98
SMCO3-201ENST00000316048 ROS1P08922 2347 aa2.69□□□□□ -1.98
SMCO3-201ENST00000316048 MALRD1Q5VYJ5 2156 aa2.69□□□□□ -1.98
SMCO3-201ENST00000316048 IGHV3-21A0A0B4J1V1 117 aa2.69□□□□□ -1.98
SMCO3-201ENST00000316048 TRAV5A0A0B4J249 113 aa2.69□□□□□ -1.98
SMCO3-201ENST00000316048 IGHV1-69DA0A0B4J2H0 117 aa2.69□□□□□ -1.98
SMCO3-201ENST00000316048 MDFIC2A0A1B0GVS7 189 aa2.69□□□□□ -1.98
SMCO3-201ENST00000316048 PLAC8L1A1L4L8 177 aa2.69□□□□□ -1.98
SMCO3-201ENST00000316048 A6NDX4 124 aa2.69□□□□□ -1.98
SMCO3-201ENST00000316048 B4DSR2 109 aa2.69□□□□□ -1.98
SMCO3-201ENST00000316048 H7BYZ3 331 aa2.69□□□□□ -1.98
SMCO3-201ENST00000316048 GNG7O60262 68 aa2.69□□□□□ -1.98
SMCO3-201ENST00000316048 IGHV1-69P01742 117 aa2.69□□□□□ -1.98
SMCO3-201ENST00000316048 HLA-DRB1P01911 266 aa2.69□□□□□ -1.98
SMCO3-201ENST00000316048 KRTAP1-4P0C5Y4 121 aa2.69□□□□□ -1.98
SMCO3-201ENST00000316048 OR10J4P0C629 311 aa2.69□□□□□ -1.98
SMCO3-201ENST00000316048 SLC25A16P16260 332 aa2.69□□□□□ -1.98
SMCO3-201ENST00000316048 CRISP2P16562 243 aa2.69□□□□□ -1.98
SMCO3-201ENST00000316048 NPPCP23582 126 aa2.69□□□□□ -1.98
SMCO3-201ENST00000316048 ZNF138P52744 262 aa2.69□□□□□ -1.98
SMCO3-201ENST00000316048 UBE2L3P68036 154 aaKnown RBP2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 129.2 ms