RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 IGHV4OR15-8A0A075B7B6 117 aa14.66□□□□□ -0.06
HOXC4-201ENST00000303406 A0A087WW49 117 aa14.66□□□□□ -0.06
HOXC4-201ENST00000303406 CD5LO43866 347 aa14.66□□□□□ -0.06
HOXC4-201ENST00000303406 HIST2H2BCQ6DN03 193 aa14.66□□□□□ -0.06
HOXC4-201ENST00000303406 ZNF664Q8N3J9 261 aa14.66□□□□□ -0.06
HOXC4-201ENST00000303406 ZFAND2AQ8N6M9 145 aa14.66□□□□□ -0.06
HOXC4-201ENST00000303406 C11orf21Q9P2W6 132 aa14.66□□□□□ -0.06
HOXC4-201ENST00000303406 TRAV21A0A0B4J279 112 aa14.66□□□□□ -0.06
HOXC4-201ENST00000303406 M0R2Z0 102 aa14.66□□□□□ -0.06
HOXC4-201ENST00000303406 LINC00614P0C842 121 aa14.66□□□□□ -0.06
HOXC4-201ENST00000303406 ZFHX3Q15911 3703 aa14.65□□□□□ -0.06
HOXC4-201ENST00000303406 SNAI2O43623 268 aa14.65□□□□□ -0.06
HOXC4-201ENST00000303406 OR5AL1P0C617 328 aa14.65□□□□□ -0.06
HOXC4-201ENST00000303406 ZNF705DP0CH99 300 aaPredicted RBP14.65□□□□□ -0.06
HOXC4-201ENST00000303406 ZNF705BP0CI00 300 aaPredicted RBP14.65□□□□□ -0.06
HOXC4-201ENST00000303406 NTF3P20783 257 aa14.65□□□□□ -0.06
HOXC4-201ENST00000303406 TWIST1Q15672 202 aa14.65□□□□□ -0.06
HOXC4-201ENST00000303406 FAM19A2Q8N3H0 131 aa14.65□□□□□ -0.06
HOXC4-201ENST00000303406 WFDC12Q8WWY7 111 aa14.65□□□□□ -0.06
HOXC4-201ENST00000303406 CREBBPQ92793 2442 aa14.64□□□□□ -0.07
HOXC4-201ENST00000303406 IGHV4-4A0A075B6R2 117 aa14.64□□□□□ -0.07
HOXC4-201ENST00000303406 FAM181BA6NEQ2 426 aa14.64□□□□□ -0.07
HOXC4-201ENST00000303406 HOXD3P31249 432 aaPredicted RBP14.64□□□□□ -0.07
HOXC4-201ENST00000303406 CACNG7P62955 275 aa14.64□□□□□ -0.07
HOXC4-201ENST00000303406 KRTAP1-1Q07627 177 aa14.64□□□□□ -0.07
HOXC4-201ENST00000303406 LCE2DQ5TA82 110 aaPredicted RBP14.64□□□□□ -0.07
HOXC4-201ENST00000303406 ORMDL3Q8N138 153 aa14.64□□□□□ -0.07
HOXC4-201ENST00000303406 KLHDC1Q8N7A1 406 aa14.64□□□□□ -0.07
HOXC4-201ENST00000303406 Q8N976 141 aa14.64□□□□□ -0.07
HOXC4-201ENST00000303406 EDN2P20800 178 aa14.63□□□□□ -0.07
HOXC4-201ENST00000303406 KRTDAPP60985 99 aa14.63□□□□□ -0.07
HOXC4-201ENST00000303406 PRR9Q5T870 116 aa14.63□□□□□ -0.07
HOXC4-201ENST00000303406 ODF3Q96PU9 254 aa14.63□□□□□ -0.07
HOXC4-201ENST00000303406 RNF114Q9Y508 228 aa14.63□□□□□ -0.07
HOXC4-201ENST00000303406 KIR2DL5BA0A0G2JN68 375 aa14.62□□□□□ -0.07
HOXC4-201ENST00000303406 KIR2DL5BA0A0G2JPC4 375 aa14.62□□□□□ -0.07
HOXC4-201ENST00000303406 PPBPP02775 128 aa14.62□□□□□ -0.07
HOXC4-201ENST00000303406 C3orf79P0CE67 100 aa14.62□□□□□ -0.07
HOXC4-201ENST00000303406 MED14OSP0DP75 135 aa14.62□□□□□ -0.07
HOXC4-201ENST00000303406 SYNJ2BPP57105 145 aa14.62□□□□□ -0.07
HOXC4-201ENST00000303406 MRPL51Q4U2R6 128 aaKnown RBP14.62□□□□□ -0.07
HOXC4-201ENST00000303406 PRR31Q5SQ13 230 aa14.62□□□□□ -0.07
HOXC4-201ENST00000303406 AMN1Q8IY45 258 aa14.62□□□□□ -0.07
HOXC4-201ENST00000303406 KIR2DL5AQ8N109 375 aa14.62□□□□□ -0.07
HOXC4-201ENST00000303406 C4orf3Q8WVX3 66 aa14.62□□□□□ -0.07
HOXC4-201ENST00000303406 MS4A6AQ9H2W1 248 aa14.62□□□□□ -0.07
HOXC4-201ENST00000303406 ABCA12Q86UK0 2595 aa14.62□□□□□ -0.07
HOXC4-201ENST00000303406 C2orf70A6NJV1 201 aa14.61□□□□□ -0.07
HOXC4-201ENST00000303406 K7EQG2 157 aa14.61□□□□□ -0.07
HOXC4-201ENST00000303406 M0QZ24 198 aa14.61□□□□□ -0.07
HOXC4-201ENST00000303406 CD33P20138 364 aa14.61□□□□□ -0.07
HOXC4-201ENST00000303406 DDTP30046 118 aa14.61□□□□□ -0.07
HOXC4-201ENST00000303406 LAMTOR2Q9Y2Q5 125 aa14.61□□□□□ -0.07
HOXC4-201ENST00000303406 APCP25054 2843 aa14.61□□□□□ -0.07
HOXC4-201ENST00000303406 IGHV1-24A0A0C4DH33 117 aa14.61□□□□□ -0.07
HOXC4-201ENST00000303406 DNAJC9-AS1A6NH13 148 aa14.61□□□□□ -0.07
HOXC4-201ENST00000303406 D6R8Y8 96 aa14.61□□□□□ -0.07
HOXC4-201ENST00000303406 SCGB2A2Q13296 93 aa14.61□□□□□ -0.07
HOXC4-201ENST00000303406 PRELID3AQ96N28 172 aa14.61□□□□□ -0.07
HOXC4-201ENST00000303406 PRO1933Q9H354 126 aa14.61□□□□□ -0.07
HOXC4-201ENST00000303406 CELSR1Q9NYQ6 3014 aa14.6□□□□□ -0.07
HOXC4-201ENST00000303406 DOPEY2Q9Y3R5 2298 aa14.6□□□□□ -0.07
HOXC4-201ENST00000303406 IGKV3-7A0A075B6H7 116 aa14.6□□□□□ -0.07
HOXC4-201ENST00000303406 LINC01619G3V211 115 aa14.6□□□□□ -0.07
HOXC4-201ENST00000303406 SNRPD3P62318 126 aaKnown RBP14.6□□□□□ -0.07
HOXC4-201ENST00000303406 Q6ZSV7 163 aa14.6□□□□□ -0.07
HOXC4-201ENST00000303406 CSMD2Q7Z408 3487 aa14.59□□□□□ -0.07
HOXC4-201ENST00000303406 KLLNB2CW77 178 aa14.59□□□□□ -0.07
HOXC4-201ENST00000303406 RNF185Q96GF1 192 aa14.59□□□□□ -0.07
HOXC4-201ENST00000303406 DUX5Q96PT3 197 aa14.59□□□□□ -0.07
HOXC4-201ENST00000303406 TRAV2A0A0B4J234 112 aa14.58□□□□□ -0.08
HOXC4-201ENST00000303406 F6UB75 175 aa14.58□□□□□ -0.08
HOXC4-201ENST00000303406 BTF3P20290 206 aaKnown RBP14.58□□□□□ -0.08
HOXC4-201ENST00000303406 FA2HQ7L5A8 372 aa14.58□□□□□ -0.08
HOXC4-201ENST00000303406 C20orf144Q9BQM9 153 aa14.58□□□□□ -0.08
HOXC4-201ENST00000303406 AP5S1Q9NUS5 200 aa14.58□□□□□ -0.08
HOXC4-201ENST00000303406 TMEM160Q9NX00 188 aa14.58□□□□□ -0.08
HOXC4-201ENST00000303406 CENPEQ02224 2701 aa14.58□□□□□ -0.08
HOXC4-201ENST00000303406 MUC21A0A0G2JKD1 596 aa14.57□□□□□ -0.08
HOXC4-201ENST00000303406 MUC21A0A140T8X8 626 aa14.57□□□□□ -0.08
HOXC4-201ENST00000303406 SRD5A1P18405 259 aa14.57□□□□□ -0.08
HOXC4-201ENST00000303406 CKS2P33552 79 aa14.57□□□□□ -0.08
HOXC4-201ENST00000303406 CTAG1AP78358 180 aa14.57□□□□□ -0.08
HOXC4-201ENST00000303406 PMCHL1Q16048 86 aa14.57□□□□□ -0.08
HOXC4-201ENST00000303406 MUC21Q5SSG8 566 aa14.57□□□□□ -0.08
HOXC4-201ENST00000303406 EBLN2Q6P2I7 272 aa14.57□□□□□ -0.08
HOXC4-201ENST00000303406 SMIM15Q7Z3B0 74 aa14.57□□□□□ -0.08
HOXC4-201ENST00000303406 PRSS3P2Q8NHM4 247 aa14.57□□□□□ -0.08
HOXC4-201ENST00000303406 PEMTQ9UBM1 199 aa14.57□□□□□ -0.08
HOXC4-201ENST00000303406 CRXO43186 299 aaPredicted RBP14.56□□□□□ -0.08
HOXC4-201ENST00000303406 LEPROTL1O95214 131 aa14.56□□□□□ -0.08
HOXC4-201ENST00000303406 LEPP41159 167 aa14.56□□□□□ -0.08
HOXC4-201ENST00000303406 VAMP8Q9BV40 100 aa14.56□□□□□ -0.08
HOXC4-201ENST00000303406 MSRB1Q9NZV6 116 aa14.56□□□□□ -0.08
HOXC4-201ENST00000303406 DEFB1P60022 68 aa14.56□□□□□ -0.08
HOXC4-201ENST00000303406 DEFA6Q01524 100 aa14.56□□□□□ -0.08
HOXC4-201ENST00000303406 TCTEX1D4Q5JR98 221 aa14.56□□□□□ -0.08
HOXC4-201ENST00000303406 WFDC3Q8IUB2 231 aa14.56□□□□□ -0.08
HOXC4-201ENST00000303406 OR10AG1Q8NH19 301 aa14.56□□□□□ -0.08
HOXC4-201ENST00000303406 YAE1D1Q9NRH1 226 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms