RNA–Protein interactions for RNA: ENST00000299705.9

TMED3-201, Transcript of transmembrane p24 trafficking protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMED3, Length 1,475 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED3-201ENST00000299705 J3KRW8 73 aa13.1□□□□□ -0.31
TMED3-201ENST00000299705 SPRY2O43597 315 aa13.1□□□□□ -0.31
TMED3-201ENST00000299705 SRSF3P84103 164 aaKnown RBP13.1□□□□□ -0.31
TMED3-201ENST00000299705 GOLT1BQ9Y3E0 138 aa13.1□□□□□ -0.31
TMED3-201ENST00000299705 NHLRC4P0CG21 123 aaPredicted RBP13.09□□□□□ -0.31
TMED3-201ENST00000299705 RNASE4P34096 147 aaKnown RBP13.09□□□□□ -0.31
TMED3-201ENST00000299705 SMUG1Q53HV7 270 aa13.09□□□□□ -0.31
TMED3-201ENST00000299705 PRR9Q5T870 116 aa13.09□□□□□ -0.31
TMED3-201ENST00000299705 ZNF705AQ6ZN79 300 aaPredicted RBP13.09□□□□□ -0.31
TMED3-201ENST00000299705 TMEM183AQ8IXX5 376 aa13.09□□□□□ -0.31
TMED3-201ENST00000299705 C1orf158Q8N1D5 194 aa13.09□□□□□ -0.31
TMED3-201ENST00000299705 TMEM256Q8N2U0 113 aa13.09□□□□□ -0.31
TMED3-201ENST00000299705 C8orf49Q96NF6 230 aa13.09□□□□□ -0.31
TMED3-201ENST00000299705 OVOL2Q9BRP0 275 aa13.09□□□□□ -0.31
TMED3-201ENST00000299705 ZNF324O75467 553 aaPredicted RBP13.08□□□□□ -0.32
TMED3-201ENST00000299705 BTN1A1Q13410 526 aa13.08□□□□□ -0.32
TMED3-201ENST00000299705 Q6AWC8 147 aa13.08□□□□□ -0.32
TMED3-201ENST00000299705 BAGE2Q86Y30 109 aa13.08□□□□□ -0.32
TMED3-201ENST00000299705 NIPSNAP3BQ9BS92 247 aa13.08□□□□□ -0.32
TMED3-201ENST00000299705 MLST8Q9BVC4 326 aa13.08□□□□□ -0.32
TMED3-201ENST00000299705 PARLQ9H300 379 aa13.08□□□□□ -0.32
TMED3-201ENST00000299705 ZMAT4Q9H898 229 aa13.08□□□□□ -0.32
TMED3-201ENST00000299705 TRAV12-3A0A0B4J271 114 aa13.07□□□□□ -0.32
TMED3-201ENST00000299705 LINC00862A6NCI5 91 aa13.07□□□□□ -0.32
TMED3-201ENST00000299705 C9JQL5 133 aa13.07□□□□□ -0.32
TMED3-201ENST00000299705 RBMY1A1P0DJD3 496 aaKnown RBP13.07□□□□□ -0.32
TMED3-201ENST00000299705 RBMY1CP0DJD4 496 aa13.07□□□□□ -0.32
TMED3-201ENST00000299705 RBMY1FQ15415 496 aaKnown RBP13.07□□□□□ -0.32
TMED3-201ENST00000299705 SMIM12Q96EX1 92 aa13.07□□□□□ -0.32
TMED3-201ENST00000299705 C9JCJ5 164 aa13.06□□□□□ -0.32
TMED3-201ENST00000299705 GCGP01275 180 aa13.06□□□□□ -0.32
TMED3-201ENST00000299705 GNG4P50150 75 aa13.06□□□□□ -0.32
TMED3-201ENST00000299705 CENPWQ5EE01 88 aa13.06□□□□□ -0.32
TMED3-201ENST00000299705 NEU1Q99519 415 aa13.06□□□□□ -0.32
TMED3-201ENST00000299705 TRBV20OR9-2A0A075B6H5 130 aa13.05□□□□□ -0.32
TMED3-201ENST00000299705 H7BYZ3 331 aa13.05□□□□□ -0.32
TMED3-201ENST00000299705 CEBPGP53567 150 aa13.05□□□□□ -0.32
TMED3-201ENST00000299705 OR11H2Q8NH07 326 aa13.05□□□□□ -0.32
TMED3-201ENST00000299705 ZC2HC1AQ96GY0 325 aa13.05□□□□□ -0.32
TMED3-201ENST00000299705 TMEM208Q9BTX3 173 aa13.05□□□□□ -0.32
TMED3-201ENST00000299705 RETNQ9HD89 108 aa13.05□□□□□ -0.32
TMED3-201ENST00000299705 TRAV21A0A0B4J279 112 aa13.04□□□□□ -0.32
TMED3-201ENST00000299705 SMIM9A6NGZ8 99 aa13.04□□□□□ -0.32
TMED3-201ENST00000299705 PFN1P07737 140 aaKnown RBP13.04□□□□□ -0.32
TMED3-201ENST00000299705 ZNF80P51504 273 aaPredicted RBP13.04□□□□□ -0.32
TMED3-201ENST00000299705 ZNF674Q2M3X9 581 aa13.04□□□□□ -0.32
TMED3-201ENST00000299705 UQCC3Q6UW78 93 aa13.04□□□□□ -0.32
TMED3-201ENST00000299705 EIF4E3Q8N5X7 224 aaKnown RBP13.04□□□□□ -0.32
TMED3-201ENST00000299705 LINC01587Q99440 93 aa13.04□□□□□ -0.32
TMED3-201ENST00000299705 PYGO2Q9BRQ0 406 aa13.04□□□□□ -0.32
TMED3-201ENST00000299705 LINC00467Q9BRT7 94 aa13.04□□□□□ -0.32
TMED3-201ENST00000299705 X6R8D5 127 aa13.04□□□□□ -0.32
TMED3-201ENST00000299705 IGHV3OR16-12A0A075B7B8 117 aa13.04□□□□□ -0.32
TMED3-201ENST00000299705 FAM74A3Q4VXF1 159 aa13.04□□□□□ -0.32
TMED3-201ENST00000299705 FABP5P3A8MUU1 101 aa13.03□□□□□ -0.32
TMED3-201ENST00000299705 IGLV2-8P01709 118 aa13.03□□□□□ -0.32
TMED3-201ENST00000299705 NHLRC2Q8NBF2 726 aa13.03□□□□□ -0.32
TMED3-201ENST00000299705 SMIM7Q9BQ49 75 aa13.03□□□□□ -0.32
TMED3-201ENST00000299705 LY96Q9Y6Y9 160 aa13.03□□□□□ -0.32
TMED3-201ENST00000299705 ZNF727A8MUV8 499 aa13.02□□□□□ -0.33
TMED3-201ENST00000299705 MIFP14174 115 aa13.02□□□□□ -0.33
TMED3-201ENST00000299705 CRIP1P50238 77 aa13.02□□□□□ -0.33
TMED3-201ENST00000299705 Q6ZQT7 251 aa13.02□□□□□ -0.33
TMED3-201ENST00000299705 COMMD7Q86VX2 200 aa13.02□□□□□ -0.33
TMED3-201ENST00000299705 SOHLH1Q5JUK2 328 aa13.01□□□□□ -0.33
TMED3-201ENST00000299705 FAM162BQ5T6X4 162 aa13.01□□□□□ -0.33
TMED3-201ENST00000299705 BIN3Q9NQY0 253 aa13.01□□□□□ -0.33
TMED3-201ENST00000299705 IGHV1OR15-1A0A075B7D0 117 aa13□□□□□ -0.33
TMED3-201ENST00000299705 RRN3P1Q2M238 152 aa13□□□□□ -0.33
TMED3-201ENST00000299705 TDRG1Q3Y452 100 aa13□□□□□ -0.33
TMED3-201ENST00000299705 OCC1Q8TAD7 63 aa13□□□□□ -0.33
TMED3-201ENST00000299705 PGPEP1LA6NFU8 196 aa12.99□□□□□ -0.33
TMED3-201ENST00000299705 SH2D1AO60880 128 aa12.99□□□□□ -0.33
TMED3-201ENST00000299705 SFTA3P0C7M3 94 aa12.99□□□□□ -0.33
TMED3-201ENST00000299705 MGST1P10620 155 aaKnown RBP12.99□□□□□ -0.33
TMED3-201ENST00000299705 ANXA2RQ3ZCQ2 193 aa12.99□□□□□ -0.33
TMED3-201ENST00000299705 FAM159AQ6UWV7 190 aa12.99□□□□□ -0.33
TMED3-201ENST00000299705 Q8NAQ8 132 aa12.99□□□□□ -0.33
TMED3-201ENST00000299705 NBEAL2Q6ZNJ1 2754 aa12.99□□□□□ -0.33
TMED3-201ENST00000299705 PRKDCP78527 4128 aaKnown RBP12.99□□□□□ -0.33
TMED3-201ENST00000299705 ZNF705GA8MUZ8 300 aaPredicted RBP12.98□□□□□ -0.33
TMED3-201ENST00000299705 ZNF493Q6ZR52 646 aa12.98□□□□□ -0.33
TMED3-201ENST00000299705 KCNS1Q96KK3 526 aa12.98□□□□□ -0.33
TMED3-201ENST00000299705 C11orf21Q9P2W6 132 aa12.98□□□□□ -0.33
TMED3-201ENST00000299705 HTN1P15515 57 aa12.97□□□□□ -0.33
TMED3-201ENST00000299705 TMEM241Q24JQ0 296 aa12.97□□□□□ -0.33
TMED3-201ENST00000299705 MUC21Q5SSG8 566 aa12.97□□□□□ -0.33
TMED3-201ENST00000299705 PRR27Q6MZM9 219 aa12.97□□□□□ -0.33
TMED3-201ENST00000299705 TMEM263Q8WUH6 116 aaKnown RBP12.97□□□□□ -0.33
TMED3-201ENST00000299705 IGHV4-28A0A0C4DH34 117 aa12.97□□□□□ -0.33
TMED3-201ENST00000299705 K7EN84 100 aa12.97□□□□□ -0.33
TMED3-201ENST00000299705 PRM2P04554 102 aa12.97□□□□□ -0.33
TMED3-201ENST00000299705 AZU1P20160 251 aa12.97□□□□□ -0.33
TMED3-201ENST00000299705 LINC01551Q86U37 167 aa12.97□□□□□ -0.33
TMED3-201ENST00000299705 RNASE8Q8TDE3 154 aaKnown RBP12.97□□□□□ -0.33
TMED3-201ENST00000299705 C16orf74Q96GX8 76 aa12.97□□□□□ -0.33
TMED3-201ENST00000299705 C11orf68Q9H3H3 251 aaKnown RBP12.97□□□□□ -0.33
TMED3-201ENST00000299705 NAT8Q9UHE5 227 aa12.97□□□□□ -0.33
TMED3-201ENST00000299705 NAGKQ9UJ70 344 aa12.97□□□□□ -0.33
TMED3-201ENST00000299705 TMEM218A2RU14 115 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms