RNA–Protein interactions for RNA: ENST00000297405.9

CSMD3-201, Transcript of CUB and Sushi multiple domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSMD3, Length 13,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-201ENST00000297405 SP5Q6BEB4 398 aaPredicted RBP3.93□□□□□ -1.78
CSMD3-201ENST00000297405 CHCHD5Q9BSY4 110 aa3.93□□□□□ -1.78
CSMD3-201ENST00000297405 LINC01587Q99440 93 aa3.93□□□□□ -1.78
CSMD3-201ENST00000297405 FHL5Q5TD97 284 aa3.93□□□□□ -1.78
CSMD3-201ENST00000297405 MORN5Q5VZ52 161 aa3.93□□□□□ -1.78
CSMD3-201ENST00000297405 WFDC11Q8NEX6 87 aa3.93□□□□□ -1.78
CSMD3-201ENST00000297405 BAALCQ8WXS3 180 aa3.93□□□□□ -1.78
CSMD3-201ENST00000297405 CXCL10P02778 98 aa3.93□□□□□ -1.78
CSMD3-201ENST00000297405 PRORYQ9H606 182 aa3.93□□□□□ -1.78
CSMD3-201ENST00000297405 ATRQ13535 2644 aa3.93□□□□□ -1.78
CSMD3-201ENST00000297405 NREPQ16612 68 aa3.93□□□□□ -1.78
CSMD3-201ENST00000297405 BADQ92934 168 aa3.93□□□□□ -1.78
CSMD3-201ENST00000297405 TMEM133Q9H2Q1 129 aa3.93□□□□□ -1.78
CSMD3-201ENST00000297405 SAA2P0DJI9 122 aaPredicted RBP3.92□□□□□ -1.78
CSMD3-201ENST00000297405 SPACA3Q8IXA5 215 aa3.92□□□□□ -1.78
CSMD3-201ENST00000297405 NXPH4O95158 308 aa3.92□□□□□ -1.78
CSMD3-201ENST00000297405 TRAV12-2A0A075B6T6 113 aa3.92□□□□□ -1.78
CSMD3-201ENST00000297405 IGHV5-51A0A0C4DH38 117 aa3.92□□□□□ -1.78
CSMD3-201ENST00000297405 NTN5Q8WTR8 489 aaPredicted RBP3.92□□□□□ -1.78
CSMD3-201ENST00000297405 MRPL35Q9NZE8 188 aaKnown RBP3.92□□□□□ -1.78
CSMD3-201ENST00000297405 TRGV4A0A0C4DH28 118 aa3.92□□□□□ -1.78
CSMD3-201ENST00000297405 LGALS9O00182 355 aa3.92□□□□□ -1.78
CSMD3-201ENST00000297405 RNASE2P10153 161 aaKnown RBP3.92□□□□□ -1.78
CSMD3-201ENST00000297405 EIF4EBP1Q13541 118 aaPredicted RBP3.92□□□□□ -1.78
CSMD3-201ENST00000297405 PLPPR2Q96GM1 343 aa3.92□□□□□ -1.78
CSMD3-201ENST00000297405 FOXQ1Q9C009 403 aa3.92□□□□□ -1.78
CSMD3-201ENST00000297405 C17orf98A8MV24 154 aa3.92□□□□□ -1.78
CSMD3-201ENST00000297405 TMEM200BQ69YZ2 307 aa3.92□□□□□ -1.78
CSMD3-201ENST00000297405 TP53TG1Q9Y2A0 90 aa3.92□□□□□ -1.78
CSMD3-201ENST00000297405 PMS2P5A8MQ11 134 aa3.92□□□□□ -1.78
CSMD3-201ENST00000297405 E9PLD3 99 aa3.92□□□□□ -1.78
CSMD3-201ENST00000297405 CRIPAKQ8N1N5 446 aa3.92□□□□□ -1.78
CSMD3-201ENST00000297405 BLCAPP62952 87 aa3.92□□□□□ -1.78
CSMD3-201ENST00000297405 C3orf36Q3SXR2 165 aa3.92□□□□□ -1.78
CSMD3-201ENST00000297405 ZNF876PQ49A33 203 aa3.92□□□□□ -1.78
CSMD3-201ENST00000297405 PDCD1Q15116 288 aa3.92□□□□□ -1.78
CSMD3-201ENST00000297405 IGKV3-11P04433 115 aa3.92□□□□□ -1.78
CSMD3-201ENST00000297405 RBX1P62877 108 aa3.92□□□□□ -1.78
CSMD3-201ENST00000297405 DAZ2Q13117 558 aaKnown RBP3.92□□□□□ -1.78
CSMD3-201ENST00000297405 DAZ4Q86SG3 579 aaKnown RBP3.92□□□□□ -1.78
CSMD3-201ENST00000297405 DAZ1Q9NQZ3 744 aaKnown RBP3.92□□□□□ -1.78
CSMD3-201ENST00000297405 DAZ3Q9NR90 486 aaKnown RBP3.92□□□□□ -1.78
CSMD3-201ENST00000297405 SHANK2-AS3Q9BTD1 123 aa3.92□□□□□ -1.78
CSMD3-201ENST00000297405 HELZ2Q9BYK8 2649 aaKnown RBP3.91□□□□□ -1.78
CSMD3-201ENST00000297405 IGHV3-20A0A0C4DH32 117 aa3.91□□□□□ -1.78
CSMD3-201ENST00000297405 SRRM4A7MD48 611 aaKnown RBP3.91□□□□□ -1.78
CSMD3-201ENST00000297405 SMIM10L1P0DMW3 83 aa3.91□□□□□ -1.78
CSMD3-201ENST00000297405 CD33P20138 364 aa3.91□□□□□ -1.78
CSMD3-201ENST00000297405 SMIM10Q96HG1 83 aa3.91□□□□□ -1.78
CSMD3-201ENST00000297405 IGKV3-7A0A075B6H7 116 aa3.91□□□□□ -1.78
CSMD3-201ENST00000297405 A6NED7 52 aa3.91□□□□□ -1.78
CSMD3-201ENST00000297405 PRSS12P56730 875 aa3.91□□□□□ -1.78
CSMD3-201ENST00000297405 STHQ8IWL8 128 aa3.91□□□□□ -1.78
CSMD3-201ENST00000297405 AMTNQ6UX39 209 aa3.91□□□□□ -1.78
CSMD3-201ENST00000297405 C1orf122Q6ZSJ8 110 aa3.91□□□□□ -1.78
CSMD3-201ENST00000297405 WFDC5Q8TCV5 224 aa3.91□□□□□ -1.78
CSMD3-201ENST00000297405 SPSB2Q99619 263 aa3.91□□□□□ -1.78
CSMD3-201ENST00000297405 SH2D1AO60880 128 aa3.91□□□□□ -1.78
CSMD3-201ENST00000297405 TIMM17AQ99595 171 aa3.91□□□□□ -1.78
CSMD3-201ENST00000297405 LSM4Q9Y4Z0 139 aaKnown RBP3.91□□□□□ -1.78
CSMD3-201ENST00000297405 SRRM5B3KS81 715 aa3.91□□□□□ -1.78
CSMD3-201ENST00000297405 M0R1W7 72 aa3.91□□□□□ -1.78
CSMD3-201ENST00000297405 FAM19A3Q7Z5A8 133 aa3.91□□□□□ -1.78
CSMD3-201ENST00000297405 DEFB119Q8N690 84 aa3.91□□□□□ -1.78
CSMD3-201ENST00000297405 CCDC140Q96MF4 163 aa3.91□□□□□ -1.78
CSMD3-201ENST00000297405 KMT2BQ9UMN6 2715 aaPredicted RBP3.91□□□□□ -1.78
CSMD3-201ENST00000297405 ZFP36L2P47974 494 aaKnown RBP3.91□□□□□ -1.78
CSMD3-201ENST00000297405 GCN1Q92616 2671 aaKnown RBP3.91□□□□□ -1.78
CSMD3-201ENST00000297405 NDUFS7O75251 213 aa3.91□□□□□ -1.78
CSMD3-201ENST00000297405 FXYD7P58549 80 aa3.91□□□□□ -1.78
CSMD3-201ENST00000297405 DPH3Q96FX2 82 aa3.91□□□□□ -1.78
CSMD3-201ENST00000297405 ZNF561-AS1K7EIQ3 104 aa3.91□□□□□ -1.78
CSMD3-201ENST00000297405 KLK10O43240 276 aa3.91□□□□□ -1.78
CSMD3-201ENST00000297405 RPL18AQ02543 176 aaKnown RBP3.91□□□□□ -1.78
CSMD3-201ENST00000297405 IGKV3D-11A0A0A0MRZ8 115 aa3.9□□□□□ -1.78
CSMD3-201ENST00000297405 PMAIP1Q13794 54 aa3.9□□□□□ -1.78
CSMD3-201ENST00000297405 MST1LQ2TV78 715 aa3.9□□□□□ -1.78
CSMD3-201ENST00000297405 MRPL51Q4U2R6 128 aaKnown RBP3.9□□□□□ -1.78
CSMD3-201ENST00000297405 ZNF474Q6S9Z5 364 aaPredicted RBP3.9□□□□□ -1.78
CSMD3-201ENST00000297405 TP73-AS1Q9UF72 201 aa3.9□□□□□ -1.78
CSMD3-201ENST00000297405 H3BTX0 84 aa3.9□□□□□ -1.78
CSMD3-201ENST00000297405 K7EM74 188 aa3.9□□□□□ -1.78
CSMD3-201ENST00000297405 RPL15P61313 204 aaKnown RBP3.9□□□□□ -1.78
CSMD3-201ENST00000297405 VWC2Q2TAL6 325 aa3.9□□□□□ -1.78
CSMD3-201ENST00000297405 IGHV3-64DA0A0J9YX35 117 aa3.9□□□□□ -1.78
CSMD3-201ENST00000297405 TRBV6-1A0A0K0K1D8 114 aa3.9□□□□□ -1.78
CSMD3-201ENST00000297405 LTAP01374 205 aa3.9□□□□□ -1.78
CSMD3-201ENST00000297405 WFDC3Q8IUB2 231 aa3.9□□□□□ -1.78
CSMD3-201ENST00000297405 NRGNQ92686 78 aa3.9□□□□□ -1.78
CSMD3-201ENST00000297405 CCL13Q99616 98 aa3.9□□□□□ -1.78
CSMD3-201ENST00000297405 IMMP1LQ96LU5 166 aa3.9□□□□□ -1.79
CSMD3-201ENST00000297405 MRPL36Q9P0J6 103 aaKnown RBP3.9□□□□□ -1.79
CSMD3-201ENST00000297405 DKK2Q9UBU2 259 aa3.9□□□□□ -1.79
CSMD3-201ENST00000297405 IGKV3D-15A0A087WSY6 115 aa3.9□□□□□ -1.79
CSMD3-201ENST00000297405 C15orf32Q32M92 178 aa3.9□□□□□ -1.79
CSMD3-201ENST00000297405 RCHY1Q96PM5 261 aa3.9□□□□□ -1.79
CSMD3-201ENST00000297405 SHISA3A0PJX4 238 aa3.9□□□□□ -1.79
CSMD3-201ENST00000297405 CISD3P0C7P0 127 aa3.9□□□□□ -1.79
CSMD3-201ENST00000297405 CRYGCP07315 174 aa3.9□□□□□ -1.79
CSMD3-201ENST00000297405 SPTSSBQ8NFR3 76 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms