RNA–Protein interactions for RNA: ENST00000297267.13

FNDC1-201, Transcript of fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC1, Length 6,552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC1-201ENST00000297267 IGHV4-59P01825 116 aa12.23□□□□□ -0.45
FNDC1-201ENST00000297267 TRPT1Q86TN4 253 aaKnown RBP12.22□□□□□ -0.45
FNDC1-201ENST00000297267 DAND5Q8N907 189 aa12.22□□□□□ -0.45
FNDC1-201ENST00000297267 Q9HAA7 133 aa12.22□□□□□ -0.45
FNDC1-201ENST00000297267 TNRC6BQ9UPQ9 1833 aaKnown RBP12.22□□□□□ -0.45
FNDC1-201ENST00000297267 IGLV10-54A0A075B6I4 117 aa12.22□□□□□ -0.45
FNDC1-201ENST00000297267 IGHV2-70DA0A0C4DH43 119 aa12.22□□□□□ -0.45
FNDC1-201ENST00000297267 ARFGEF3Q5TH69 2177 aa12.22□□□□□ -0.45
FNDC1-201ENST00000297267 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.22□□□□□ -0.45
FNDC1-201ENST00000297267 PRSS46E5RG02 174 aa12.21□□□□□ -0.45
FNDC1-201ENST00000297267 PCP2Q8IVA1 136 aa12.21□□□□□ -0.45
FNDC1-201ENST00000297267 SDHAF1A6NFY7 115 aa12.21□□□□□ -0.45
FNDC1-201ENST00000297267 H3BRN7 92 aa12.21□□□□□ -0.45
FNDC1-201ENST00000297267 I3L3M4 83 aa12.21□□□□□ -0.45
FNDC1-201ENST00000297267 USMG5Q96IX5 58 aa12.21□□□□□ -0.45
FNDC1-201ENST00000297267 H3BMM0 161 aa12.21□□□□□ -0.45
FNDC1-201ENST00000297267 IGHV4-38-2P0DP08 117 aa12.21□□□□□ -0.45
FNDC1-201ENST00000297267 UBE2WQ96B02 151 aa12.21□□□□□ -0.45
FNDC1-201ENST00000297267 KIAA1549LQ6ZVL6 1849 aa12.21□□□□□ -0.46
FNDC1-201ENST00000297267 IGHV4-28A0A0C4DH34 117 aa12.21□□□□□ -0.46
FNDC1-201ENST00000297267 MRPL27Q9P0M9 148 aaKnown RBP12.21□□□□□ -0.46
FNDC1-201ENST00000297267 CTSZQ9UBR2 303 aa12.21□□□□□ -0.46
FNDC1-201ENST00000297267 CEND1Q8N111 149 aa12.21□□□□□ -0.46
FNDC1-201ENST00000297267 PROP1O75360 226 aa12.2□□□□□ -0.46
FNDC1-201ENST00000297267 THAP8Q8NA92 274 aa12.2□□□□□ -0.46
FNDC1-201ENST00000297267 EGR2P11161 476 aaPredicted RBP12.2□□□□□ -0.46
FNDC1-201ENST00000297267 FRMD6-AS1P0C7T7 363 aa12.2□□□□□ -0.46
FNDC1-201ENST00000297267 PLA2G2EQ9NZK7 142 aa12.2□□□□□ -0.46
FNDC1-201ENST00000297267 SMPXQ9UHP9 88 aa12.2□□□□□ -0.46
FNDC1-201ENST00000297267 NDUFS8O00217 210 aa12.2□□□□□ -0.46
FNDC1-201ENST00000297267 LY6G5BQ8NDX9 201 aa12.2□□□□□ -0.46
FNDC1-201ENST00000297267 CR1LQ2VPA4 569 aa12.2□□□□□ -0.46
FNDC1-201ENST00000297267 FAM215AQ9Y5M1 114 aa12.2□□□□□ -0.46
FNDC1-201ENST00000297267 TANC1Q9C0D5 1861 aa12.19□□□□□ -0.46
FNDC1-201ENST00000297267 ZNF561-AS1K7EIQ3 104 aa12.19□□□□□ -0.46
FNDC1-201ENST00000297267 PRR25Q96S07 402 aa12.19□□□□□ -0.46
FNDC1-201ENST00000297267 SCRT2Q9NQ03 307 aa12.19□□□□□ -0.46
FNDC1-201ENST00000297267 OBSL1O75147 1896 aa12.19□□□□□ -0.46
FNDC1-201ENST00000297267 K7ENP7 123 aa12.19□□□□□ -0.46
FNDC1-201ENST00000297267 UBE2E1P51965 193 aa12.19□□□□□ -0.46
FNDC1-201ENST00000297267 BVES-AS1Q5T3Y7 98 aa12.19□□□□□ -0.46
FNDC1-201ENST00000297267 Q8N8P6 123 aa12.19□□□□□ -0.46
FNDC1-201ENST00000297267 ANGP03950 147 aaKnown RBP12.18□□□□□ -0.46
FNDC1-201ENST00000297267 LMO1P25800 156 aa12.18□□□□□ -0.46
FNDC1-201ENST00000297267 ANAPC10Q9UM13 185 aa12.18□□□□□ -0.46
FNDC1-201ENST00000297267 MSRB1Q9NZV6 116 aa12.18□□□□□ -0.46
FNDC1-201ENST00000297267 IGHV1OR15-1A0A075B7D0 117 aa12.18□□□□□ -0.46
FNDC1-201ENST00000297267 ETDBQ3ZM63 59 aa12.18□□□□□ -0.46
FNDC1-201ENST00000297267 C22orf46C9J442 243 aa12.18□□□□□ -0.46
FNDC1-201ENST00000297267 HAMPP81172 84 aa12.18□□□□□ -0.46
FNDC1-201ENST00000297267 DEFB112Q30KQ8 113 aa12.18□□□□□ -0.46
FNDC1-201ENST00000297267 IGKV1OR2-108A0A075B7D4 117 aa12.18□□□□□ -0.46
FNDC1-201ENST00000297267 CCL25O15444 150 aa12.18□□□□□ -0.46
FNDC1-201ENST00000297267 TRBV25-1A0A075B6N4 114 aa12.17□□□□□ -0.46
FNDC1-201ENST00000297267 APC2O95996 2303 aa12.17□□□□□ -0.46
FNDC1-201ENST00000297267 EML6Q6ZMW3 1958 aa12.17□□□□□ -0.46
FNDC1-201ENST00000297267 PRSS29PA6NIE9 313 aa12.17□□□□□ -0.46
FNDC1-201ENST00000297267 CADP27708 2225 aa12.17□□□□□ -0.46
FNDC1-201ENST00000297267 VOPP1Q96AW1 172 aa12.17□□□□□ -0.46
FNDC1-201ENST00000297267 TTTY13Q9BZ97 58 aa12.17□□□□□ -0.46
FNDC1-201ENST00000297267 INTS1Q8N201 2190 aaKnown RBP12.17□□□□□ -0.46
FNDC1-201ENST00000297267 C9orf118A6NHY6 69 aa12.17□□□□□ -0.46
FNDC1-201ENST00000297267 CD5LO43866 347 aa12.16□□□□□ -0.46
FNDC1-201ENST00000297267 IGHV2-70P01814 119 aa12.16□□□□□ -0.46
FNDC1-201ENST00000297267 SSC4DQ8WTU2 575 aa12.16□□□□□ -0.46
FNDC1-201ENST00000297267 COL6A6A6NMZ7 2263 aa12.16□□□□□ -0.46
FNDC1-201ENST00000297267 CGB7P0DN87 165 aa12.15□□□□□ -0.46
FNDC1-201ENST00000297267 Q0VG73 95 aa12.15□□□□□ -0.46
FNDC1-201ENST00000297267 GFRA4Q9GZZ7 299 aa12.15□□□□□ -0.46
FNDC1-201ENST00000297267 IGLC2P0DOY2 106 aa12.15□□□□□ -0.46
FNDC1-201ENST00000297267 IGLC3P0DOY3 106 aa12.15□□□□□ -0.46
FNDC1-201ENST00000297267 DSCR9P59020 149 aa12.15□□□□□ -0.46
FNDC1-201ENST00000297267 C15orf53Q8NAA6 179 aa12.15□□□□□ -0.46
FNDC1-201ENST00000297267 CRYGCP07315 174 aa12.15□□□□□ -0.46
FNDC1-201ENST00000297267 TRBV20-1A0A075B6N2 111 aa12.15□□□□□ -0.47
FNDC1-201ENST00000297267 SHISA9B4DS77 424 aa12.15□□□□□ -0.47
FNDC1-201ENST00000297267 C2orf16Q68DN1 1984 aa12.14□□□□□ -0.47
FNDC1-201ENST00000297267 C11orf53Q8IXP5 236 aa12.14□□□□□ -0.47
FNDC1-201ENST00000297267 LYPD1Q8N2G4 141 aa12.14□□□□□ -0.47
FNDC1-201ENST00000297267 C9orf153Q5TBE3 101 aa12.14□□□□□ -0.47
FNDC1-201ENST00000297267 U3KQE9 123 aa12.14□□□□□ -0.47
FNDC1-201ENST00000297267 IGHV3-30P01768 117 aa12.14□□□□□ -0.47
FNDC1-201ENST00000297267 IGHV3-33P01772 117 aa12.14□□□□□ -0.47
FNDC1-201ENST00000297267 IGHV3-30-3P0DP02 117 aa12.14□□□□□ -0.47
FNDC1-201ENST00000297267 IGHV3-30-5P0DP03 117 aa12.14□□□□□ -0.47
FNDC1-201ENST00000297267 CDKN1BP46527 198 aa12.14□□□□□ -0.47
FNDC1-201ENST00000297267 KLF12Q9Y4X4 402 aa12.14□□□□□ -0.47
FNDC1-201ENST00000297267 F8WEM9 126 aa12.14□□□□□ -0.47
FNDC1-201ENST00000297267 Q6ZS49 121 aa12.14□□□□□ -0.47
FNDC1-201ENST00000297267 SH2D6Q7Z4S9 175 aa12.14□□□□□ -0.47
FNDC1-201ENST00000297267 C5orf38Q86SI9 138 aa12.14□□□□□ -0.47
FNDC1-201ENST00000297267 LY96Q9Y6Y9 160 aa12.14□□□□□ -0.47
FNDC1-201ENST00000297267 RPL32P62910 135 aaKnown RBP12.13□□□□□ -0.47
FNDC1-201ENST00000297267 BLCAPP62952 87 aa12.13□□□□□ -0.47
FNDC1-201ENST00000297267 E7EUB6 86 aa12.13□□□□□ -0.47
FNDC1-201ENST00000297267 E9PQ18 207 aa12.13□□□□□ -0.47
FNDC1-201ENST00000297267 NDUFS5O43920 106 aa12.13□□□□□ -0.47
FNDC1-201ENST00000297267 CARD19Q96LW7 228 aa12.13□□□□□ -0.47
FNDC1-201ENST00000297267 SS18L2Q9UHA2 77 aa12.13□□□□□ -0.47
FNDC1-201ENST00000297267 CRLF1O75462 422 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 164.9 ms