RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 ZNF767PQ75MW2 155 aa6.48□□□□□ -1.37
HMGN1-201ENST00000288344 C11orf72Q8NBR9 251 aa6.48□□□□□ -1.37
HMGN1-201ENST00000288344 TMED6Q8WW62 240 aa6.48□□□□□ -1.37
HMGN1-201ENST00000288344 LINC00476Q8WZB0 136 aa6.48□□□□□ -1.37
HMGN1-201ENST00000288344 OTORQ9NRC9 128 aa6.48□□□□□ -1.37
HMGN1-201ENST00000288344 A0A1W2PPV4 95 aa6.47□□□□□ -1.37
HMGN1-201ENST00000288344 PGPA6NDG6 321 aa6.47□□□□□ -1.37
HMGN1-201ENST00000288344 ARL14EPLP0DKL9 152 aa6.47□□□□□ -1.37
HMGN1-201ENST00000288344 MED14OSP0DP75 135 aa6.47□□□□□ -1.37
HMGN1-201ENST00000288344 GCHFRP30047 84 aa6.47□□□□□ -1.37
HMGN1-201ENST00000288344 CDC34P49427 236 aaPredicted RBP6.47□□□□□ -1.37
HMGN1-201ENST00000288344 TCTAP57738 103 aa6.47□□□□□ -1.37
HMGN1-201ENST00000288344 UBE2L3P68036 154 aaKnown RBP6.47□□□□□ -1.37
HMGN1-201ENST00000288344 LGALSLQ3ZCW2 172 aaPredicted RBP6.47□□□□□ -1.37
HMGN1-201ENST00000288344 ZNF493Q6ZR52 646 aa6.47□□□□□ -1.37
HMGN1-201ENST00000288344 ZNF575Q86XF7 245 aa6.47□□□□□ -1.37
HMGN1-201ENST00000288344 TCTE3Q8IZS6 198 aa6.47□□□□□ -1.37
HMGN1-201ENST00000288344 AAMDCQ9H7C9 122 aa6.47□□□□□ -1.37
HMGN1-201ENST00000288344 TP53TG3Q9ULZ0 132 aa6.47□□□□□ -1.37
HMGN1-201ENST00000288344 LENEPQ9Y5L5 61 aa6.47□□□□□ -1.37
HMGN1-201ENST00000288344 DYNC1H1Q14204 4646 aaKnown RBP6.46□□□□□ -1.38
HMGN1-201ENST00000288344 TRAV10A0A0B4J240 114 aa6.46□□□□□ -1.38
HMGN1-201ENST00000288344 A0A0D9SG52 128 aa6.46□□□□□ -1.38
HMGN1-201ENST00000288344 C7orf71A4D174 169 aa6.46□□□□□ -1.38
HMGN1-201ENST00000288344 LYRM9A8MSI8 78 aa6.46□□□□□ -1.38
HMGN1-201ENST00000288344 SEC11BP0C7V7 166 aa6.46□□□□□ -1.38
HMGN1-201ENST00000288344 LEPP41159 167 aa6.46□□□□□ -1.38
HMGN1-201ENST00000288344 ZNF138P52744 262 aa6.46□□□□□ -1.38
HMGN1-201ENST00000288344 DAZ2Q13117 558 aaKnown RBP6.46□□□□□ -1.38
HMGN1-201ENST00000288344 ANXA2RQ3ZCQ2 193 aa6.46□□□□□ -1.38
HMGN1-201ENST00000288344 LGALS9CQ6DKI2 356 aa6.46□□□□□ -1.38
HMGN1-201ENST00000288344 CCDC28AQ8IWP9 274 aa6.46□□□□□ -1.38
HMGN1-201ENST00000288344 RXFP4Q8TDU9 374 aa6.46□□□□□ -1.38
HMGN1-201ENST00000288344 C2CD4CQ8TF44 421 aa6.46□□□□□ -1.38
HMGN1-201ENST00000288344 TMEM263Q8WUH6 116 aaKnown RBP6.46□□□□□ -1.38
HMGN1-201ENST00000288344 MBD3L1Q8WWY6 194 aa6.46□□□□□ -1.38
HMGN1-201ENST00000288344 LINC01587Q99440 93 aa6.46□□□□□ -1.38
HMGN1-201ENST00000288344 PYGO2Q9BRQ0 406 aa6.46□□□□□ -1.38
HMGN1-201ENST00000288344 NIPSNAP3BQ9BS92 247 aa6.46□□□□□ -1.38
HMGN1-201ENST00000288344 KLK5Q9Y337 293 aaPredicted RBP6.46□□□□□ -1.38
HMGN1-201ENST00000288344 MUC4Q99102 2169 aa6.45□□□□□ -1.38
HMGN1-201ENST00000288344 DEFB131BA0A096LNP1 70 aa6.45□□□□□ -1.38
HMGN1-201ENST00000288344 BORCS7-ASMTA0A0B4J1R7 106 aa6.45□□□□□ -1.38
HMGN1-201ENST00000288344 TRAV12-3A0A0B4J271 114 aa6.45□□□□□ -1.38
HMGN1-201ENST00000288344 A0A1W2PRE2 83 aa6.45□□□□□ -1.38
HMGN1-201ENST00000288344 GGTLC3B5MD39 225 aa6.45□□□□□ -1.38
HMGN1-201ENST00000288344 FHITP49789 147 aa6.45□□□□□ -1.38
HMGN1-201ENST00000288344 EMP1P54849 157 aa6.45□□□□□ -1.38
HMGN1-201ENST00000288344 BTN1A1Q13410 526 aa6.45□□□□□ -1.38
HMGN1-201ENST00000288344 Q6AWC8 147 aa6.45□□□□□ -1.38
HMGN1-201ENST00000288344 C18orf15Q96N68 181 aa6.45□□□□□ -1.38
HMGN1-201ENST00000288344 ARPC5LQ9BPX5 153 aa6.45□□□□□ -1.38
HMGN1-201ENST00000288344 ACTR3CQ9C0K3 210 aaPredicted RBP6.45□□□□□ -1.38
HMGN1-201ENST00000288344 TMPRSS5Q9H3S3 457 aa6.45□□□□□ -1.38
HMGN1-201ENST00000288344 CTXND1A0A1B0GTU2 59 aa6.44□□□□□ -1.38
HMGN1-201ENST00000288344 TEX48A0A1B0GUV7 120 aa6.44□□□□□ -1.38
HMGN1-201ENST00000288344 BCL2L11O43521 198 aa6.44□□□□□ -1.38
HMGN1-201ENST00000288344 CXorf1O96002 111 aa6.44□□□□□ -1.38
HMGN1-201ENST00000288344 TDRG1Q3Y452 100 aa6.44□□□□□ -1.38
HMGN1-201ENST00000288344 TMUB2Q71RG4 321 aa6.44□□□□□ -1.38
HMGN1-201ENST00000288344 Q8TAT8 98 aa6.44□□□□□ -1.38
HMGN1-201ENST00000288344 STOML3Q8TAV4 291 aa6.44□□□□□ -1.38
HMGN1-201ENST00000288344 C16orf74Q96GX8 76 aa6.44□□□□□ -1.38
HMGN1-201ENST00000288344 FAM210BQ96KR6 192 aa6.44□□□□□ -1.38
HMGN1-201ENST00000288344 EPDR1Q9UM22 224 aa6.44□□□□□ -1.38
HMGN1-201ENST00000288344 TIMM8BQ9Y5J9 83 aaPredicted RBP6.44□□□□□ -1.38
HMGN1-201ENST00000288344 BIRC6Q9NR09 4857 aa6.43□□□□□ -1.38
HMGN1-201ENST00000288344 PKHD1P08F94 4074 aa6.43□□□□□ -1.38
HMGN1-201ENST00000288344 HECTD4Q9Y4D8 3996 aa6.43□□□□□ -1.38
HMGN1-201ENST00000288344 IGHV4-4A0A075B6R2 117 aa6.43□□□□□ -1.38
HMGN1-201ENST00000288344 TRAV8-1A0A0A6YYK1 113 aa6.43□□□□□ -1.38
HMGN1-201ENST00000288344 KRTAP4-8A0A0G2JLE6 195 aa6.43□□□□□ -1.38
HMGN1-201ENST00000288344 CBY3A6NI87 242 aa6.43□□□□□ -1.38
HMGN1-201ENST00000288344 FAM74A7A6NL05 159 aa6.43□□□□□ -1.38
HMGN1-201ENST00000288344 IGLL5B9A064 214 aa6.43□□□□□ -1.38
HMGN1-201ENST00000288344 C1QBP02746 253 aa6.43□□□□□ -1.38
HMGN1-201ENST00000288344 TCRAP04437 139 aa6.43□□□□□ -1.38
HMGN1-201ENST00000288344 RNASE4P34096 147 aaKnown RBP6.43□□□□□ -1.38
HMGN1-201ENST00000288344 GNG5P63218 68 aa6.43□□□□□ -1.38
HMGN1-201ENST00000288344 TMEM78Q5T7P6 136 aa6.43□□□□□ -1.38
HMGN1-201ENST00000288344 COX8CQ7Z4L0 72 aa6.43□□□□□ -1.38
HMGN1-201ENST00000288344 C5orf17Q8NAS9 161 aa6.43□□□□□ -1.38
HMGN1-201ENST00000288344 TMEM208Q9BTX3 173 aa6.43□□□□□ -1.38
HMGN1-201ENST00000288344 TMEM167BQ9NRX6 74 aa6.43□□□□□ -1.38
HMGN1-201ENST00000288344 KLF12Q9Y4X4 402 aa6.43□□□□□ -1.38
HMGN1-201ENST00000288344 A0A1B0GVG6 124 aa6.42□□□□□ -1.38
HMGN1-201ENST00000288344 J3KRW8 73 aa6.42□□□□□ -1.38
HMGN1-201ENST00000288344 SPINK4O60575 86 aa6.42□□□□□ -1.38
HMGN1-201ENST00000288344 GPX1P07203 203 aa6.42□□□□□ -1.38
HMGN1-201ENST00000288344 MALP21145 153 aa6.42□□□□□ -1.38
HMGN1-201ENST00000288344 CSN1S1P47710 185 aa6.42□□□□□ -1.38
HMGN1-201ENST00000288344 ZNF80P51504 273 aaPredicted RBP6.42□□□□□ -1.38
HMGN1-201ENST00000288344 IBA57Q5T440 356 aaKnown RBP6.42□□□□□ -1.38
HMGN1-201ENST00000288344 LINC00479Q96M42 142 aa6.42□□□□□ -1.38
HMGN1-201ENST00000288344 NOP10Q9NPE3 64 aaKnown RBP6.42□□□□□ -1.38
HMGN1-201ENST00000288344 C11orf21Q9P2W6 132 aa6.42□□□□□ -1.38
HMGN1-201ENST00000288344 NACAE9PAV3 2078 aa6.41□□□□□ -1.38
HMGN1-201ENST00000288344 IGHV1OR15-1A0A075B7D0 117 aa6.41□□□□□ -1.38
HMGN1-201ENST00000288344 SERTM2A0A1B0GWG4 89 aa6.41□□□□□ -1.38
HMGN1-201ENST00000288344 UMAD1C9J7I0 102 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms