RNA–Protein interactions for RNA: ENST00000263666.8

PDZRN3-201, Transcript of PDZ domain containing ring finger 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZRN3, Length 4,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-201ENST00000263666 TNRC18O15417 2968 aaPredicted RBP12.68□□□□□ -0.38
PDZRN3-201ENST00000263666 C19orf71A6NCJ1 209 aa12.68□□□□□ -0.38
PDZRN3-201ENST00000263666 C3orf36Q3SXR2 165 aa12.68□□□□□ -0.38
PDZRN3-201ENST00000263666 ZNF562Q6V9R5 426 aa12.68□□□□□ -0.38
PDZRN3-201ENST00000263666 MLST8Q9BVC4 326 aa12.68□□□□□ -0.38
PDZRN3-201ENST00000263666 KLF12Q9Y4X4 402 aa12.68□□□□□ -0.38
PDZRN3-201ENST00000263666 TRAV40A0A0B4J280 105 aa12.68□□□□□ -0.38
PDZRN3-201ENST00000263666 KAAG1Q9UBP8 84 aa12.68□□□□□ -0.38
PDZRN3-201ENST00000263666 K7EP13 123 aa12.68□□□□□ -0.38
PDZRN3-201ENST00000263666 TNFRSF6BO95407 300 aa12.68□□□□□ -0.38
PDZRN3-201ENST00000263666 C14orf178Q8N769 122 aaPredicted RBP12.68□□□□□ -0.38
PDZRN3-201ENST00000263666 TNRC6BQ9UPQ9 1833 aaKnown RBP12.68□□□□□ -0.38
PDZRN3-201ENST00000263666 NEGR1Q7Z3B1 354 aa12.67□□□□□ -0.38
PDZRN3-201ENST00000263666 MRPL52Q86TS9 123 aaKnown RBP12.67□□□□□ -0.38
PDZRN3-201ENST00000263666 SCGB3A1Q96QR1 104 aa12.67□□□□□ -0.38
PDZRN3-201ENST00000263666 APOMO95445 188 aa12.67□□□□□ -0.38
PDZRN3-201ENST00000263666 PRTN3P24158 256 aa12.67□□□□□ -0.38
PDZRN3-201ENST00000263666 Q1RN00 199 aa12.67□□□□□ -0.38
PDZRN3-201ENST00000263666 ADORA2A-AS1P86434 159 aa12.67□□□□□ -0.38
PDZRN3-201ENST00000263666 URB1-AS1Q96HZ7 61 aa12.67□□□□□ -0.38
PDZRN3-201ENST00000263666 A0A1B0GW15 77 aa12.67□□□□□ -0.38
PDZRN3-201ENST00000263666 LRBAP50851 2863 aa12.66□□□□□ -0.38
PDZRN3-201ENST00000263666 SAP30O75446 220 aa12.66□□□□□ -0.38
PDZRN3-201ENST00000263666 CRYGCP07315 174 aa12.66□□□□□ -0.38
PDZRN3-201ENST00000263666 ABCA12Q86UK0 2595 aa12.66□□□□□ -0.38
PDZRN3-201ENST00000263666 OR11H12B2RN74 326 aa12.66□□□□□ -0.38
PDZRN3-201ENST00000263666 OR11H1Q8NG94 326 aa12.66□□□□□ -0.38
PDZRN3-201ENST00000263666 OR11H2Q8NH07 326 aa12.66□□□□□ -0.38
PDZRN3-201ENST00000263666 COX8AP10176 69 aa12.66□□□□□ -0.38
PDZRN3-201ENST00000263666 OCIAD2Q56VL3 154 aa12.66□□□□□ -0.38
PDZRN3-201ENST00000263666 ZNF256Q9Y2P7 627 aaPredicted RBP12.66□□□□□ -0.38
PDZRN3-201ENST00000263666 ZNF462Q96JM2 2506 aa12.66□□□□□ -0.38
PDZRN3-201ENST00000263666 CD5LO43866 347 aa12.65□□□□□ -0.38
PDZRN3-201ENST00000263666 IGKCP01834 107 aa12.65□□□□□ -0.38
PDZRN3-201ENST00000263666 CRIP1P50238 77 aa12.65□□□□□ -0.38
PDZRN3-201ENST00000263666 ZNF80P51504 273 aaPredicted RBP12.65□□□□□ -0.38
PDZRN3-201ENST00000263666 TAX1BP3O14907 124 aa12.65□□□□□ -0.38
PDZRN3-201ENST00000263666 FOXE3Q13461 319 aa12.65□□□□□ -0.38
PDZRN3-201ENST00000263666 PRSS22Q9GZN4 317 aa12.65□□□□□ -0.38
PDZRN3-201ENST00000263666 TMEM14CQ9P0S9 112 aa12.65□□□□□ -0.38
PDZRN3-201ENST00000263666 F6UB75 175 aa12.64□□□□□ -0.39
PDZRN3-201ENST00000263666 LINC00574Q9H8X3 128 aa12.64□□□□□ -0.39
PDZRN3-201ENST00000263666 CD300EQ496F6 205 aaPredicted RBP12.64□□□□□ -0.39
PDZRN3-201ENST00000263666 SMIM12Q96EX1 92 aa12.64□□□□□ -0.39
PDZRN3-201ENST00000263666 CYSLTR1Q9Y271 337 aa12.64□□□□□ -0.39
PDZRN3-201ENST00000263666 DPM2O94777 84 aa12.64□□□□□ -0.39
PDZRN3-201ENST00000263666 IGHV3-64A0A075B6Q5 118 aa12.64□□□□□ -0.39
PDZRN3-201ENST00000263666 TMEM170BQ5T4T1 132 aa12.64□□□□□ -0.39
PDZRN3-201ENST00000263666 SAMD5Q5TGI4 173 aa12.64□□□□□ -0.39
PDZRN3-201ENST00000263666 HSD52Q0P140 79 aa12.63□□□□□ -0.39
PDZRN3-201ENST00000263666 ZNF418Q8TF45 676 aaPredicted RBP12.63□□□□□ -0.39
PDZRN3-201ENST00000263666 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.63□□□□□ -0.39
PDZRN3-201ENST00000263666 LYPD1Q8N2G4 141 aa12.63□□□□□ -0.39
PDZRN3-201ENST00000263666 LINC01548A6NM66 108 aa12.62□□□□□ -0.39
PDZRN3-201ENST00000263666 GAS8-AS1O95177 125 aa12.62□□□□□ -0.39
PDZRN3-201ENST00000263666 SEC11AP67812 179 aa12.62□□□□□ -0.39
PDZRN3-201ENST00000263666 MAPK1IP1LQ8NDC0 245 aa12.62□□□□□ -0.39
PDZRN3-201ENST00000263666 OR1N2Q8NGR9 330 aa12.62□□□□□ -0.39
PDZRN3-201ENST00000263666 CFHR4Q92496 578 aa12.62□□□□□ -0.39
PDZRN3-201ENST00000263666 MYCNOSP40205 109 aa12.62□□□□□ -0.39
PDZRN3-201ENST00000263666 DTX2Q86UW9 622 aa12.62□□□□□ -0.39
PDZRN3-201ENST00000263666 TTC9CQ8N5M4 171 aa12.62□□□□□ -0.39
PDZRN3-201ENST00000263666 FANCD2OSQ96PS1 177 aa12.62□□□□□ -0.39
PDZRN3-201ENST00000263666 PAX8Q06710 450 aa12.62□□□□□ -0.39
PDZRN3-201ENST00000263666 NXT2Q9NPJ8 142 aaKnown RBP12.62□□□□□ -0.39
PDZRN3-201ENST00000263666 SCRT2Q9NQ03 307 aa12.62□□□□□ -0.39
PDZRN3-201ENST00000263666 IGHV2-70DA0A0C4DH43 119 aa12.61□□□□□ -0.39
PDZRN3-201ENST00000263666 J3QR89 54 aa12.61□□□□□ -0.39
PDZRN3-201ENST00000263666 CTSGP08311 255 aa12.61□□□□□ -0.39
PDZRN3-201ENST00000263666 MRPL35Q9NZE8 188 aaKnown RBP12.61□□□□□ -0.39
PDZRN3-201ENST00000263666 DEFB125Q8N687 156 aa12.61□□□□□ -0.39
PDZRN3-201ENST00000263666 AGPAT4-IT1Q9H0P7 198 aa12.61□□□□□ -0.39
PDZRN3-201ENST00000263666 ZNF56Q15929 161 aa12.61□□□□□ -0.39
PDZRN3-201ENST00000263666 AMTNQ6UX39 209 aa12.61□□□□□ -0.39
PDZRN3-201ENST00000263666 DPF1Q92782 380 aa12.61□□□□□ -0.39
PDZRN3-201ENST00000263666 DUX5Q96PT3 197 aa12.61□□□□□ -0.39
PDZRN3-201ENST00000263666 RNF5Q99942 180 aa12.61□□□□□ -0.39
PDZRN3-201ENST00000263666 PSMB2P49721 201 aa12.6□□□□□ -0.39
PDZRN3-201ENST00000263666 MTORP42345 2549 aa12.6□□□□□ -0.39
PDZRN3-201ENST00000263666 A0A087WWL8 130 aa12.6□□□□□ -0.39
PDZRN3-201ENST00000263666 ZFP36P26651 326 aaKnown RBP12.6□□□□□ -0.39
PDZRN3-201ENST00000263666 LINC01545Q5VT33 79 aa12.6□□□□□ -0.39
PDZRN3-201ENST00000263666 CHAC1Q9BUX1 264 aa12.6□□□□□ -0.39
PDZRN3-201ENST00000263666 BEX4Q9NWD9 120 aaPredicted RBP12.6□□□□□ -0.39
PDZRN3-201ENST00000263666 ATP5LO75964 103 aa12.6□□□□□ -0.39
PDZRN3-201ENST00000263666 IGLV2-11P01706 119 aa12.6□□□□□ -0.39
PDZRN3-201ENST00000263666 ASIPP42127 132 aa12.6□□□□□ -0.39
PDZRN3-201ENST00000263666 PDE6HQ13956 83 aa12.6□□□□□ -0.39
PDZRN3-201ENST00000263666 CDSNQ15517 529 aa12.59□□□□□ -0.39
PDZRN3-201ENST00000263666 FAM159AQ6UWV7 190 aa12.59□□□□□ -0.39
PDZRN3-201ENST00000263666 OR4X2Q8NGF9 303 aa12.59□□□□□ -0.39
PDZRN3-201ENST00000263666 MRPL16Q9NX20 251 aaKnown RBP12.59□□□□□ -0.39
PDZRN3-201ENST00000263666 IGHV7-81A0A0B4J1V7 117 aa12.59□□□□□ -0.39
PDZRN3-201ENST00000263666 TRAV41A0A0B4J266 112 aa12.59□□□□□ -0.39
PDZRN3-201ENST00000263666 CD7P09564 240 aa12.58□□□□□ -0.39
PDZRN3-201ENST00000263666 SMAGPQ0VAQ4 97 aa12.58□□□□□ -0.39
PDZRN3-201ENST00000263666 C8orf86Q6ZUL3 223 aa12.58□□□□□ -0.39
PDZRN3-201ENST00000263666 SLC50A1Q9BRV3 221 aa12.58□□□□□ -0.39
PDZRN3-201ENST00000263666 COL12A1Q99715 3063 aa12.58□□□□□ -0.4
PDZRN3-201ENST00000263666 IGLV11-55A0A075B6I3 123 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms