RNA–Protein interactions for RNA: ENST00000261980.2

VSX2-201, Transcript of visual system homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX2, Length 2,995 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2-201ENST00000261980 IGHV1-46P01743 117 aa12.89□□□□□ -0.35
VSX2-201ENST00000261980 MRGPRG-AS1Q2M3A8 158 aa12.89□□□□□ -0.35
VSX2-201ENST00000261980 CFAP161Q6P656 301 aa12.89□□□□□ -0.35
VSX2-201ENST00000261980 PIP4P1Q86T03 277 aa12.89□□□□□ -0.35
VSX2-201ENST00000261980 MYOZ3Q8TDC0 251 aa12.89□□□□□ -0.35
VSX2-201ENST00000261980 AAMDCQ9H7C9 122 aa12.89□□□□□ -0.35
VSX2-201ENST00000261980 OR11H12B2RN74 326 aa12.88□□□□□ -0.35
VSX2-201ENST00000261980 CRYGCP07315 174 aa12.88□□□□□ -0.35
VSX2-201ENST00000261980 KLRD1Q13241 179 aa12.88□□□□□ -0.35
VSX2-201ENST00000261980 Q6AWC8 147 aa12.88□□□□□ -0.35
VSX2-201ENST00000261980 OR11H1Q8NG94 326 aa12.88□□□□□ -0.35
VSX2-201ENST00000261980 OR11H2Q8NH07 326 aa12.88□□□□□ -0.35
VSX2-201ENST00000261980 DTX2Q86UW9 622 aa12.87□□□□□ -0.35
VSX2-201ENST00000261980 DLX4Q92988 240 aaPredicted RBP12.87□□□□□ -0.35
VSX2-201ENST00000261980 RAI1Q7Z5J4 1906 aaPredicted RBP12.87□□□□□ -0.35
VSX2-201ENST00000261980 IGHV3-66A0A0C4DH42 116 aa12.87□□□□□ -0.35
VSX2-201ENST00000261980 SCGB1C2P0DMR2 95 aa12.87□□□□□ -0.35
VSX2-201ENST00000261980 MDS2Q8NDY4 140 aa12.87□□□□□ -0.35
VSX2-201ENST00000261980 PLEKHB2Q96CS7 222 aa12.87□□□□□ -0.35
VSX2-201ENST00000261980 SCGB2A1O75556 95 aa12.87□□□□□ -0.35
VSX2-201ENST00000261980 ZMAT4Q9H898 229 aa12.87□□□□□ -0.35
VSX2-201ENST00000261980 DCHS2Q6V1P9 2916 aa12.86□□□□□ -0.35
VSX2-201ENST00000261980 COX7A1P24310 79 aa12.86□□□□□ -0.35
VSX2-201ENST00000261980 CCL11P51671 97 aa12.86□□□□□ -0.35
VSX2-201ENST00000261980 FOXC1Q12948 553 aa12.86□□□□□ -0.35
VSX2-201ENST00000261980 TEX29Q8N6K0 151 aa12.86□□□□□ -0.35
VSX2-201ENST00000261980 RNF125Q96EQ8 232 aa12.86□□□□□ -0.35
VSX2-201ENST00000261980 CCDC179H3BU77 68 aa12.86□□□□□ -0.35
VSX2-201ENST00000261980 HOXB4P17483 251 aaPredicted RBP12.86□□□□□ -0.35
VSX2-201ENST00000261980 AJUBAQ96IF1 538 aa12.86□□□□□ -0.35
VSX2-201ENST00000261980 SHANK2-AS3Q9BTD1 123 aa12.85□□□□□ -0.35
VSX2-201ENST00000261980 TRBV7-3A0A075B6L6 115 aa12.85□□□□□ -0.35
VSX2-201ENST00000261980 GAGE5Q13069 117 aa12.85□□□□□ -0.35
VSX2-201ENST00000261980 GAGE6Q13070 117 aa12.85□□□□□ -0.35
VSX2-201ENST00000261980 PRR25Q96S07 402 aa12.85□□□□□ -0.35
VSX2-201ENST00000261980 ARHGAP32A7KAX9 2087 aa12.85□□□□□ -0.35
VSX2-201ENST00000261980 C5orf64Q2M2E5 130 aa12.84□□□□□ -0.35
VSX2-201ENST00000261980 ZFAND6Q6FIF0 208 aa12.84□□□□□ -0.35
VSX2-201ENST00000261980 RAX2Q96IS3 184 aa12.84□□□□□ -0.35
VSX2-201ENST00000261980 ZNF815PA8K554 130 aa12.84□□□□□ -0.35
VSX2-201ENST00000261980 RNF182Q8N6D2 247 aa12.84□□□□□ -0.35
VSX2-201ENST00000261980 CACNA1AO00555 2505 aa12.84□□□□□ -0.35
VSX2-201ENST00000261980 IGLV1-44P01699 117 aa12.84□□□□□ -0.35
VSX2-201ENST00000261980 ZNF491Q8N8L2 437 aa12.84□□□□□ -0.35
VSX2-201ENST00000261980 MYMXA0A1B0GTQ4 84 aa12.83□□□□□ -0.36
VSX2-201ENST00000261980 CRLF1O75462 422 aa12.83□□□□□ -0.36
VSX2-201ENST00000261980 TCL1BO95988 128 aa12.83□□□□□ -0.36
VSX2-201ENST00000261980 ANKRD29Q8N6D5 301 aa12.83□□□□□ -0.36
VSX2-201ENST00000261980 GATD1Q8NB37 220 aa12.83□□□□□ -0.36
VSX2-201ENST00000261980 RAXQ9Y2V3 346 aa12.83□□□□□ -0.36
VSX2-201ENST00000261980 SIGLEC9Q9Y336 463 aa12.83□□□□□ -0.36
VSX2-201ENST00000261980 IGHV3-49A0A0A0MS15 119 aa12.83□□□□□ -0.36
VSX2-201ENST00000261980 TRAV8-2A0A0B4J237 113 aa12.83□□□□□ -0.36
VSX2-201ENST00000261980 TMEM78Q5T7P6 136 aa12.83□□□□□ -0.36
VSX2-201ENST00000261980 PPP1R27Q86WC6 154 aa12.83□□□□□ -0.36
VSX2-201ENST00000261980 SLC25A15Q9Y619 301 aa12.83□□□□□ -0.36
VSX2-201ENST00000261980 ATP5LO75964 103 aa12.82□□□□□ -0.36
VSX2-201ENST00000261980 LGALS1P09382 135 aaKnown RBP12.82□□□□□ -0.36
VSX2-201ENST00000261980 SLC25A16P16260 332 aa12.82□□□□□ -0.36
VSX2-201ENST00000261980 NXT2Q9NPJ8 142 aaKnown RBP12.82□□□□□ -0.36
VSX2-201ENST00000261980 TRAV4A0A0B4J268 109 aa12.82□□□□□ -0.36
VSX2-201ENST00000261980 PRAC2D3DTV9 90 aa12.82□□□□□ -0.36
VSX2-201ENST00000261980 TM4SF5O14894 197 aa12.82□□□□□ -0.36
VSX2-201ENST00000261980 TMEM14CQ9P0S9 112 aa12.82□□□□□ -0.36
VSX2-201ENST00000261980 CRIP2P52943 208 aaPredicted RBP12.81□□□□□ -0.36
VSX2-201ENST00000261980 PRADC1Q9BSG0 188 aa12.81□□□□□ -0.36
VSX2-201ENST00000261980 ITPR1Q14643 2758 aa12.81□□□□□ -0.36
VSX2-201ENST00000261980 TEX22C9J3V5 150 aa12.81□□□□□ -0.36
VSX2-201ENST00000261980 H3BRN7 92 aa12.81□□□□□ -0.36
VSX2-201ENST00000261980 ZNF575Q86XF7 245 aa12.81□□□□□ -0.36
VSX2-201ENST00000261980 TRBV7-9A0A0J9YWB2 115 aa12.81□□□□□ -0.36
VSX2-201ENST00000261980 I3L2K1 104 aa12.81□□□□□ -0.36
VSX2-201ENST00000261980 NHLRC4P0CG21 123 aaPredicted RBP12.8□□□□□ -0.36
VSX2-201ENST00000261980 FAM27E3Q08E93 113 aa12.8□□□□□ -0.36
VSX2-201ENST00000261980 TRPT1Q86TN4 253 aaKnown RBP12.8□□□□□ -0.36
VSX2-201ENST00000261980 BEX4Q9NWD9 120 aaPredicted RBP12.8□□□□□ -0.36
VSX2-201ENST00000261980 ONECUT1Q9UBC0 465 aa12.8□□□□□ -0.36
VSX2-201ENST00000261980 A0A087WX48 190 aa12.8□□□□□ -0.36
VSX2-201ENST00000261980 LAGE3Q14657 143 aa12.8□□□□□ -0.36
VSX2-201ENST00000261980 IL17RELQ6ZVW7 336 aa12.8□□□□□ -0.36
VSX2-201ENST00000261980 PPDPFLQ8WWR9 84 aa12.8□□□□□ -0.36
VSX2-201ENST00000261980 CFHR4Q92496 578 aa12.8□□□□□ -0.36
VSX2-201ENST00000261980 PTPRQQ9UMZ3 2332 aa12.79□□□□□ -0.36
VSX2-201ENST00000261980 INS-IGF2F8WCM5 200 aa12.79□□□□□ -0.36
VSX2-201ENST00000261980 K7EIM0 57 aa12.79□□□□□ -0.36
VSX2-201ENST00000261980 GLRXP35754 106 aa12.79□□□□□ -0.36
VSX2-201ENST00000261980 TEN1Q86WV5 123 aa12.79□□□□□ -0.36
VSX2-201ENST00000261980 TLN1Q9Y490 2541 aaKnown RBP12.79□□□□□ -0.36
VSX2-201ENST00000261980 COL6A6A6NMZ7 2263 aa12.79□□□□□ -0.36
VSX2-201ENST00000261980 SCGB3A1Q96QR1 104 aa12.78□□□□□ -0.36
VSX2-201ENST00000261980 ZFHX3Q15911 3703 aa12.78□□□□□ -0.36
VSX2-201ENST00000261980 BSNQ9UPA5 3926 aa12.78□□□□□ -0.36
VSX2-201ENST00000261980 PKD1L2Q7Z442 2459 aa12.78□□□□□ -0.36
VSX2-201ENST00000261980 IGLC6P0CF74 106 aa12.78□□□□□ -0.36
VSX2-201ENST00000261980 ARL3P36405 182 aa12.78□□□□□ -0.36
VSX2-201ENST00000261980 DYNAPQ8N1N2 210 aa12.78□□□□□ -0.36
VSX2-201ENST00000261980 A8MWV9 139 aa12.78□□□□□ -0.36
VSX2-201ENST00000261980 C9JAW5 83 aa12.78□□□□□ -0.36
VSX2-201ENST00000261980 ZNF688P0C7X2 276 aa12.78□□□□□ -0.36
VSX2-201ENST00000261980 SRSF1Q07955 248 aaKnown RBP eCLIP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms