RNA–Protein interactions for RNA: ENST00000254941.6

NIP7-202, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

TSL 1 (best) BASIC

Gene NIP7, Length 1,887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-202ENST00000254941 ZNF80P51504 273 aaPredicted RBP7.05□□□□□ -1.28
NIP7-202ENST00000254941 FAM3BP58499 235 aaPredicted RBP7.05□□□□□ -1.28
NIP7-202ENST00000254941 GDF5OSQ5U4N7 250 aa7.05□□□□□ -1.28
NIP7-202ENST00000254941 OR4B1Q8NGF8 309 aa7.05□□□□□ -1.28
NIP7-202ENST00000254941 FAM19A4Q96LR4 140 aa7.05□□□□□ -1.28
NIP7-202ENST00000254941 RPP21Q9H633 154 aaKnown RBP7.05□□□□□ -1.28
NIP7-202ENST00000254941 TRRAPQ9Y4A5 3859 aa7.05□□□□□ -1.28
NIP7-202ENST00000254941 TRAV9-1A0A075B6T8 112 aa7.04□□□□□ -1.28
NIP7-202ENST00000254941 A0A1W2PPQ1 181 aa7.04□□□□□ -1.28
NIP7-202ENST00000254941 RAB5AP20339 215 aa7.04□□□□□ -1.28
NIP7-202ENST00000254941 FOXI2Q6ZQN5 318 aa7.04□□□□□ -1.28
NIP7-202ENST00000254941 ZFAND2AQ8N6M9 145 aa7.04□□□□□ -1.28
NIP7-202ENST00000254941 TSKUQ8WUA8 353 aa7.04□□□□□ -1.28
NIP7-202ENST00000254941 SAV1Q9H4B6 383 aaPredicted RBP7.04□□□□□ -1.28
NIP7-202ENST00000254941 FABP5P3A8MUU1 101 aa7.04□□□□□ -1.28
NIP7-202ENST00000254941 A8MWL6 223 aa7.04□□□□□ -1.28
NIP7-202ENST00000254941 SH2D1AO60880 128 aa7.04□□□□□ -1.28
NIP7-202ENST00000254941 CRISP2P16562 243 aa7.04□□□□□ -1.28
NIP7-202ENST00000254941 EBLN2Q6P2I7 272 aa7.04□□□□□ -1.28
NIP7-202ENST00000254941 OR2K2Q8NGT1 345 aa7.04□□□□□ -1.28
NIP7-202ENST00000254941 BTF3L4Q96K17 158 aa7.04□□□□□ -1.28
NIP7-202ENST00000254941 FAM210BQ96KR6 192 aa7.04□□□□□ -1.28
NIP7-202ENST00000254941 ODF3Q96PU9 254 aa7.04□□□□□ -1.28
NIP7-202ENST00000254941 FAM231BA6NCW3 169 aa7.03□□□□□ -1.28
NIP7-202ENST00000254941 CD33P20138 364 aa7.03□□□□□ -1.28
NIP7-202ENST00000254941 DEFB131AP59861 70 aa7.03□□□□□ -1.28
NIP7-202ENST00000254941 APRG1Q8IVJ8 170 aa7.03□□□□□ -1.28
NIP7-202ENST00000254941 OR2D3Q8NGH3 330 aa7.03□□□□□ -1.28
NIP7-202ENST00000254941 GFRA4Q9GZZ7 299 aa7.03□□□□□ -1.28
NIP7-202ENST00000254941 MAP6D1Q9H9H5 199 aa7.03□□□□□ -1.28
NIP7-202ENST00000254941 HIGD1CA8MV81 97 aa7.02□□□□□ -1.28
NIP7-202ENST00000254941 DUSP14O95147 198 aaKnown RBP7.02□□□□□ -1.28
NIP7-202ENST00000254941 TYMSP04818 313 aa7.02□□□□□ -1.28
NIP7-202ENST00000254941 RPL19P84098 196 aaKnown RBP7.02□□□□□ -1.28
NIP7-202ENST00000254941 PRR9Q5T870 116 aa7.02□□□□□ -1.28
NIP7-202ENST00000254941 NEU1Q99519 415 aa7.02□□□□□ -1.28
NIP7-202ENST00000254941 ZNF747Q9BV97 191 aa7.02□□□□□ -1.28
NIP7-202ENST00000254941 NAT8BQ9UHF3 227 aa7.02□□□□□ -1.28
NIP7-202ENST00000254941 KLLNB2CW77 178 aa7.02□□□□□ -1.29
NIP7-202ENST00000254941 GPX1P07203 203 aa7.02□□□□□ -1.29
NIP7-202ENST00000254941 HLA-DRB4P13762 266 aa7.02□□□□□ -1.29
NIP7-202ENST00000254941 INSL3P51460 131 aa7.02□□□□□ -1.29
NIP7-202ENST00000254941 FOXA3P55318 350 aaPredicted RBP7.02□□□□□ -1.29
NIP7-202ENST00000254941 TCL1AP56279 114 aa7.02□□□□□ -1.29
NIP7-202ENST00000254941 ODF3L2Q3SX64 289 aa7.02□□□□□ -1.29
NIP7-202ENST00000254941 NUP35Q8NFH5 326 aa7.02□□□□□ -1.29
NIP7-202ENST00000254941 GTSF1Q8WW33 167 aa7.02□□□□□ -1.29
NIP7-202ENST00000254941 HLA-DRB4X5D2U9 266 aa7.02□□□□□ -1.29
NIP7-202ENST00000254941 XKRY2A2RUG3 117 aa7.01□□□□□ -1.29
NIP7-202ENST00000254941 TMEM189A5PLL7 270 aa7.01□□□□□ -1.29
NIP7-202ENST00000254941 A8MTW9 85 aa7.01□□□□□ -1.29
NIP7-202ENST00000254941 H3BMM0 161 aa7.01□□□□□ -1.29
NIP7-202ENST00000254941 RPS10P46783 165 aaKnown RBP7.01□□□□□ -1.29
NIP7-202ENST00000254941 BEAN1Q3B7T3 259 aa7.01□□□□□ -1.29
NIP7-202ENST00000254941 LINC01559Q495D7 138 aa7.01□□□□□ -1.29
NIP7-202ENST00000254941 Q6AWC8 147 aa7.01□□□□□ -1.29
NIP7-202ENST00000254941 ZNF575Q86XF7 245 aa7.01□□□□□ -1.29
NIP7-202ENST00000254941 FAM110AQ9BQ89 295 aa7.01□□□□□ -1.29
NIP7-202ENST00000254941 SRD5A3Q9H8P0 318 aa7.01□□□□□ -1.29
NIP7-202ENST00000254941 TMA7Q9Y2S6 64 aaKnown RBP7.01□□□□□ -1.29
NIP7-202ENST00000254941 PKD1L1Q8TDX9 2849 aa7.01□□□□□ -1.29
NIP7-202ENST00000254941 KNCNA6PVL3 124 aa7□□□□□ -1.29
NIP7-202ENST00000254941 ORM1P02763 201 aa7□□□□□ -1.29
NIP7-202ENST00000254941 GZMBP10144 247 aa7□□□□□ -1.29
NIP7-202ENST00000254941 CMC4P56277 68 aaPredicted RBP7□□□□□ -1.29
NIP7-202ENST00000254941 RPS20P60866 119 aaKnown RBP7□□□□□ -1.29
NIP7-202ENST00000254941 KIR3DS1Q14943 382 aa7□□□□□ -1.29
NIP7-202ENST00000254941 ZNF124Q15973 351 aa7□□□□□ -1.29
NIP7-202ENST00000254941 ACTL10Q5JWF8 245 aa7□□□□□ -1.29
NIP7-202ENST00000254941 AMTNQ6UX39 209 aa7□□□□□ -1.29
NIP7-202ENST00000254941 WFDC9Q8NEX5 89 aa7□□□□□ -1.29
NIP7-202ENST00000254941 SPATA3Q8NHX4 192 aa7□□□□□ -1.29
NIP7-202ENST00000254941 TMEM158Q8WZ71 300 aa7□□□□□ -1.29
NIP7-202ENST00000254941 C11orf21Q9P2W6 132 aa7□□□□□ -1.29
NIP7-202ENST00000254941 TRAV21A0A0B4J279 112 aa7□□□□□ -1.29
NIP7-202ENST00000254941 OR11H12B2RN74 326 aa7□□□□□ -1.29
NIP7-202ENST00000254941 J3KRW8 73 aa7□□□□□ -1.29
NIP7-202ENST00000254941 IGKV3-20P01619 116 aa7□□□□□ -1.29
NIP7-202ENST00000254941 TSPOP30536 169 aa7□□□□□ -1.29
NIP7-202ENST00000254941 LEPP41159 167 aa7□□□□□ -1.29
NIP7-202ENST00000254941 CDKN1BP46527 198 aa7□□□□□ -1.29
NIP7-202ENST00000254941 C9orf66Q5T8R8 295 aa7□□□□□ -1.29
NIP7-202ENST00000254941 Q6ZQT7 251 aa7□□□□□ -1.29
NIP7-202ENST00000254941 C3orf56Q8N813 242 aa7□□□□□ -1.29
NIP7-202ENST00000254941 CLUHP3Q96NS8 147 aa7□□□□□ -1.29
NIP7-202ENST00000254941 IGKV3D-20A0A0C4DH25 116 aa6.99□□□□□ -1.29
NIP7-202ENST00000254941 SPINK4O60575 86 aa6.99□□□□□ -1.29
NIP7-202ENST00000254941 RNASE4P34096 147 aaKnown RBP6.99□□□□□ -1.29
NIP7-202ENST00000254941 RASL11AQ6T310 242 aa6.99□□□□□ -1.29
NIP7-202ENST00000254941 SHISA2Q6UWI4 295 aa6.99□□□□□ -1.29
NIP7-202ENST00000254941 ATP5L2Q7Z4Y8 100 aa6.99□□□□□ -1.29
NIP7-202ENST00000254941 TMSB15BA0A087X1C1 80 aa6.98□□□□□ -1.29
NIP7-202ENST00000254941 M0R2Z0 102 aa6.98□□□□□ -1.29
NIP7-202ENST00000254941 TRGC2P03986 189 aa6.98□□□□□ -1.29
NIP7-202ENST00000254941 FRMD6-AS1P0C7T7 363 aa6.98□□□□□ -1.29
NIP7-202ENST00000254941 LORP23490 312 aaPredicted RBP6.98□□□□□ -1.29
NIP7-202ENST00000254941 SPINK13Q1W4C9 94 aa6.98□□□□□ -1.29
NIP7-202ENST00000254941 PGLYRP4Q96LB8 373 aa6.98□□□□□ -1.29
NIP7-202ENST00000254941 MCRIP2Q9BUT9 160 aaKnown RBP6.98□□□□□ -1.29
NIP7-202ENST00000254941 C7orf71A4D174 169 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms