RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 SFRP2Q96HF1 295 aa9.57□□□□□ -0.88
LSM8-201ENST00000249299 SGK494Q96LW2 274 aa9.57□□□□□ -0.88
LSM8-201ENST00000249299 C19orf71A6NCJ1 209 aa9.56□□□□□ -0.88
LSM8-201ENST00000249299 FABP5P3A8MUU1 101 aa9.56□□□□□ -0.88
LSM8-201ENST00000249299 K7EN84 100 aa9.56□□□□□ -0.88
LSM8-201ENST00000249299 CD7P09564 240 aa9.56□□□□□ -0.88
LSM8-201ENST00000249299 MGST1P10620 155 aaKnown RBP9.56□□□□□ -0.88
LSM8-201ENST00000249299 CDKN1BP46527 198 aa9.56□□□□□ -0.88
LSM8-201ENST00000249299 CT83Q5H943 113 aa9.56□□□□□ -0.88
LSM8-201ENST00000249299 FAM162BQ5T6X4 162 aa9.56□□□□□ -0.88
LSM8-201ENST00000249299 GDF5OSQ5U4N7 250 aa9.56□□□□□ -0.88
LSM8-201ENST00000249299 AMTNQ6UX39 209 aa9.56□□□□□ -0.88
LSM8-201ENST00000249299 TRPT1Q86TN4 253 aaKnown RBP9.56□□□□□ -0.88
LSM8-201ENST00000249299 STHQ8IWL8 128 aa9.56□□□□□ -0.88
LSM8-201ENST00000249299 ZFAND2AQ8N6M9 145 aa9.56□□□□□ -0.88
LSM8-201ENST00000249299 C15orf54Q8N8G6 183 aa9.56□□□□□ -0.88
LSM8-201ENST00000249299 OR4B1Q8NGF8 309 aa9.56□□□□□ -0.88
LSM8-201ENST00000249299 Q8TAT8 98 aa9.56□□□□□ -0.88
LSM8-201ENST00000249299 DAZAP1Q96EP5 407 aaKnown RBP9.56□□□□□ -0.88
LSM8-201ENST00000249299 C7orf77A4D0Y5 90 aa9.56□□□□□ -0.88
LSM8-201ENST00000249299 CXorf65A6NEN9 183 aa9.56□□□□□ -0.88
LSM8-201ENST00000249299 PFN1P07737 140 aaKnown RBP9.56□□□□□ -0.88
LSM8-201ENST00000249299 ZNF705DP0CH99 300 aaPredicted RBP9.56□□□□□ -0.88
LSM8-201ENST00000249299 ZNF705BP0CI00 300 aaPredicted RBP9.56□□□□□ -0.88
LSM8-201ENST00000249299 Q6AWC8 147 aa9.56□□□□□ -0.88
LSM8-201ENST00000249299 MORN3Q6PF18 240 aaPredicted RBP9.56□□□□□ -0.88
LSM8-201ENST00000249299 ZC2HC1AQ96GY0 325 aa9.56□□□□□ -0.88
LSM8-201ENST00000249299 C20orf144Q9BQM9 153 aa9.56□□□□□ -0.88
LSM8-201ENST00000249299 TRAV21A0A0B4J279 112 aa9.55□□□□□ -0.88
LSM8-201ENST00000249299 PGPEP1LA6NFU8 196 aa9.55□□□□□ -0.88
LSM8-201ENST00000249299 KNCNA6PVL3 124 aa9.55□□□□□ -0.88
LSM8-201ENST00000249299 GPX1P07203 203 aa9.55□□□□□ -0.88
LSM8-201ENST00000249299 ERVFC1-1P60608 527 aa9.55□□□□□ -0.88
LSM8-201ENST00000249299 IBA57Q5T440 356 aaKnown RBP9.55□□□□□ -0.88
LSM8-201ENST00000249299 OR10G8Q8NGN5 311 aa9.55□□□□□ -0.88
LSM8-201ENST00000249299 IMMP2LQ96T52 175 aa9.55□□□□□ -0.88
LSM8-201ENST00000249299 XKRY2A2RUG3 117 aa9.54□□□□□ -0.88
LSM8-201ENST00000249299 FAM231BA6NCW3 169 aa9.54□□□□□ -0.88
LSM8-201ENST00000249299 P01737 135 aa9.54□□□□□ -0.88
LSM8-201ENST00000249299 DEFB1P60022 68 aa9.54□□□□□ -0.88
LSM8-201ENST00000249299 Q8N1Y9 231 aa9.54□□□□□ -0.88
LSM8-201ENST00000249299 NUDT10Q8NFP7 164 aa9.54□□□□□ -0.88
LSM8-201ENST00000249299 NUDT11Q96G61 164 aa9.54□□□□□ -0.88
LSM8-201ENST00000249299 C8orf49Q96NF6 230 aa9.54□□□□□ -0.88
LSM8-201ENST00000249299 C1QTNF4Q9BXJ3 329 aa9.54□□□□□ -0.88
LSM8-201ENST00000249299 TUBA4BQ9H853 241 aa9.54□□□□□ -0.88
LSM8-201ENST00000249299 SORL1Q92673 2214 aa9.53□□□□□ -0.88
LSM8-201ENST00000249299 KIR2DL5BA0A0G2JN68 375 aa9.53□□□□□ -0.88
LSM8-201ENST00000249299 KIR2DL5BA0A0G2JPC4 375 aa9.53□□□□□ -0.88
LSM8-201ENST00000249299 A8MZ25 164 aa9.53□□□□□ -0.88
LSM8-201ENST00000249299 H7BYZ3 331 aa9.53□□□□□ -0.88
LSM8-201ENST00000249299 CXCL1P09341 107 aa9.53□□□□□ -0.88
LSM8-201ENST00000249299 CRIP1P50238 77 aa9.53□□□□□ -0.88
LSM8-201ENST00000249299 RPS20P60866 119 aaKnown RBP9.53□□□□□ -0.88
LSM8-201ENST00000249299 OR5I1Q13606 314 aa9.53□□□□□ -0.88
LSM8-201ENST00000249299 RNF212Q495C1 297 aa9.53□□□□□ -0.88
LSM8-201ENST00000249299 KIR2DL5AQ8N109 375 aa9.53□□□□□ -0.88
LSM8-201ENST00000249299 NHLRC2Q8NBF2 726 aa9.53□□□□□ -0.88
LSM8-201ENST00000249299 KIR2DL5BQ8NHK3 375 aa9.53□□□□□ -0.88
LSM8-201ENST00000249299 AURKAIP1Q9NWT8 199 aaPredicted RBP9.53□□□□□ -0.88
LSM8-201ENST00000249299 C7orf71A4D174 169 aa9.52□□□□□ -0.89
LSM8-201ENST00000249299 A8MWL6 223 aa9.52□□□□□ -0.89
LSM8-201ENST00000249299 GATCO43716 136 aaKnown RBP9.52□□□□□ -0.89
LSM8-201ENST00000249299 SH2D1AO60880 128 aa9.52□□□□□ -0.89
LSM8-201ENST00000249299 KPRPQ5T749 579 aaPredicted RBP9.52□□□□□ -0.89
LSM8-201ENST00000249299 GFRA4Q9GZZ7 299 aa9.52□□□□□ -0.89
LSM8-201ENST00000249299 RPP21Q9H633 154 aaKnown RBP9.52□□□□□ -0.89
LSM8-201ENST00000249299 RPS10P5Q9NQ39 176 aa9.52□□□□□ -0.89
LSM8-201ENST00000249299 ZNF324O75467 553 aaPredicted RBP9.51□□□□□ -0.89
LSM8-201ENST00000249299 ZNF80P51504 273 aaPredicted RBP9.51□□□□□ -0.89
LSM8-201ENST00000249299 FOXA3P55318 350 aaPredicted RBP9.51□□□□□ -0.89
LSM8-201ENST00000249299 TDRG1Q3Y452 100 aa9.51□□□□□ -0.89
LSM8-201ENST00000249299 PRR27Q6MZM9 219 aa9.51□□□□□ -0.89
LSM8-201ENST00000249299 LINC00322Q6ZN03 302 aaPredicted RBP9.51□□□□□ -0.89
LSM8-201ENST00000249299 TMEM256Q8N2U0 113 aa9.51□□□□□ -0.89
LSM8-201ENST00000249299 BTF3L4Q96K17 158 aa9.51□□□□□ -0.89
LSM8-201ENST00000249299 KCNS1Q96KK3 526 aa9.51□□□□□ -0.89
LSM8-201ENST00000249299 LINC00467Q9BRT7 94 aa9.51□□□□□ -0.89
LSM8-201ENST00000249299 RNASE7Q9H1E1 156 aaKnown RBP9.51□□□□□ -0.89
LSM8-201ENST00000249299 SMCO4Q9NRQ5 59 aa9.51□□□□□ -0.89
LSM8-201ENST00000249299 V9GYV3 84 aa9.51□□□□□ -0.89
LSM8-201ENST00000249299 PKD1L1Q8TDX9 2849 aa9.5□□□□□ -0.89
LSM8-201ENST00000249299 TRAV9-1A0A075B6T8 112 aa9.5□□□□□ -0.89
LSM8-201ENST00000249299 RBMY1BA6NDE4 496 aaKnown RBP9.5□□□□□ -0.89
LSM8-201ENST00000249299 RBMY1EA6NEQ0 496 aaKnown RBP9.5□□□□□ -0.89
LSM8-201ENST00000249299 ZNF705GA8MUZ8 300 aaPredicted RBP9.5□□□□□ -0.89
LSM8-201ENST00000249299 RBMY1DP0C7P1 496 aaKnown RBP9.5□□□□□ -0.89
LSM8-201ENST00000249299 RNASE4P34096 147 aaKnown RBP9.5□□□□□ -0.89
LSM8-201ENST00000249299 ZNF124Q15973 351 aa9.5□□□□□ -0.89
LSM8-201ENST00000249299 GFI1BQ5VTD9 330 aa9.5□□□□□ -0.89
LSM8-201ENST00000249299 DEFB125Q8N687 156 aa9.5□□□□□ -0.89
LSM8-201ENST00000249299 TSKUQ8WUA8 353 aa9.5□□□□□ -0.89
LSM8-201ENST00000249299 LOC102724200A0A096LPH7 203 aaPredicted RBP9.49□□□□□ -0.89
LSM8-201ENST00000249299 TMEM189A5PLL7 270 aa9.49□□□□□ -0.89
LSM8-201ENST00000249299 UBE2CO00762 179 aa9.49□□□□□ -0.89
LSM8-201ENST00000249299 CRXO43186 299 aaPredicted RBP9.49□□□□□ -0.89
LSM8-201ENST00000249299 INSP01308 110 aa9.49□□□□□ -0.89
LSM8-201ENST00000249299 IGKV3-20P01619 116 aa9.49□□□□□ -0.89
LSM8-201ENST00000249299 PRB4P10163 310 aaPredicted RBP9.49□□□□□ -0.89
LSM8-201ENST00000249299 APOC4P55056 127 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 2418.3 ms