RNA–Protein interactions for RNA: ENST00000228872.8

CDKN1B-201, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1B, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-201ENST00000228872 ZNF418Q8TF45 676 aaPredicted RBP13.74□□□□□ -0.21
CDKN1B-201ENST00000228872 ZNF48Q96MX3 618 aaPredicted RBP13.74□□□□□ -0.21
CDKN1B-201ENST00000228872 CTSZQ9UBR2 303 aa13.74□□□□□ -0.21
CDKN1B-201ENST00000228872 POLEQ07864 2286 aa13.74□□□□□ -0.21
CDKN1B-201ENST00000228872 PKDREJQ9NTG1 2253 aa13.74□□□□□ -0.21
CDKN1B-201ENST00000228872 FBXL19-AS1Q494R0 122 aa13.74□□□□□ -0.21
CDKN1B-201ENST00000228872 CCL21O00585 134 aa13.73□□□□□ -0.21
CDKN1B-201ENST00000228872 MORN3Q6PF18 240 aaPredicted RBP13.73□□□□□ -0.21
CDKN1B-201ENST00000228872 ORM1P02763 201 aa13.73□□□□□ -0.21
CDKN1B-201ENST00000228872 BSPH1Q075Z2 132 aa13.73□□□□□ -0.21
CDKN1B-201ENST00000228872 KLRD1Q13241 179 aa13.73□□□□□ -0.21
CDKN1B-201ENST00000228872 ATP6V0E2Q8NHE4 81 aa13.73□□□□□ -0.21
CDKN1B-201ENST00000228872 CYSLTR1Q9Y271 337 aa13.73□□□□□ -0.21
CDKN1B-201ENST00000228872 A0A087WX48 190 aa13.72□□□□□ -0.21
CDKN1B-201ENST00000228872 TMEM178BH3BS89 294 aa13.72□□□□□ -0.21
CDKN1B-201ENST00000228872 TNFRSF13BO14836 293 aaPredicted RBP13.72□□□□□ -0.21
CDKN1B-201ENST00000228872 DLX1P56177 255 aa13.72□□□□□ -0.21
CDKN1B-201ENST00000228872 SRSF2Q01130 221 aaKnown RBP13.72□□□□□ -0.21
CDKN1B-201ENST00000228872 IGHV1-3A0A0C4DH29 117 aa13.72□□□□□ -0.21
CDKN1B-201ENST00000228872 LINC01619G3V211 115 aa13.72□□□□□ -0.21
CDKN1B-201ENST00000228872 SPINK8P0C7L1 97 aa13.72□□□□□ -0.21
CDKN1B-201ENST00000228872 SMCPP49901 116 aaPredicted RBP13.72□□□□□ -0.21
CDKN1B-201ENST00000228872 MYOZ3Q8TDC0 251 aa13.72□□□□□ -0.21
CDKN1B-201ENST00000228872 RPEQ96AT9 228 aa13.72□□□□□ -0.21
CDKN1B-201ENST00000228872 SPTA1P02549 2419 aa13.72□□□□□ -0.21
CDKN1B-201ENST00000228872 CHD8Q9HCK8 2581 aa13.71□□□□□ -0.21
CDKN1B-201ENST00000228872 NCBP2LA6PVI3 153 aaKnown RBP13.71□□□□□ -0.21
CDKN1B-201ENST00000228872 C17orf100A8MU93 164 aa13.71□□□□□ -0.21
CDKN1B-201ENST00000228872 PRB3Q04118 309 aaPredicted RBP13.71□□□□□ -0.21
CDKN1B-201ENST00000228872 CFAP126Q5VTH2 177 aa13.71□□□□□ -0.21
CDKN1B-201ENST00000228872 AGRNO00468 2067 aa13.71□□□□□ -0.21
CDKN1B-201ENST00000228872 NDUFA3O95167 84 aa13.71□□□□□ -0.22
CDKN1B-201ENST00000228872 ADIPOQQ15848 244 aa13.71□□□□□ -0.22
CDKN1B-201ENST00000228872 LCNL1Q6ZST4 164 aa13.71□□□□□ -0.22
CDKN1B-201ENST00000228872 DTX2Q86UW9 622 aa13.71□□□□□ -0.22
CDKN1B-201ENST00000228872 S4R3C0 116 aa13.71□□□□□ -0.22
CDKN1B-201ENST00000228872 RELNP78509 3460 aa13.7□□□□□ -0.22
CDKN1B-201ENST00000228872 MT-ATP8P03928 68 aa13.7□□□□□ -0.22
CDKN1B-201ENST00000228872 ADORA2A-AS1P86434 159 aa13.7□□□□□ -0.22
CDKN1B-201ENST00000228872 FHL3Q13643 280 aa13.7□□□□□ -0.22
CDKN1B-201ENST00000228872 NFE4Q86UQ8 179 aa13.7□□□□□ -0.22
CDKN1B-201ENST00000228872 CCL17Q92583 94 aa13.7□□□□□ -0.22
CDKN1B-201ENST00000228872 PLNP26678 52 aa13.69□□□□□ -0.22
CDKN1B-201ENST00000228872 RNASE6Q93091 150 aaKnown RBP13.69□□□□□ -0.22
CDKN1B-201ENST00000228872 SRSF8Q9BRL6 282 aaKnown RBP13.69□□□□□ -0.22
CDKN1B-201ENST00000228872 HOXA3O43365 443 aaPredicted RBP13.69□□□□□ -0.22
CDKN1B-201ENST00000228872 PGPEP1Q9NXJ5 209 aa13.69□□□□□ -0.22
CDKN1B-201ENST00000228872 MYMXA0A1B0GTQ4 84 aa13.68□□□□□ -0.22
CDKN1B-201ENST00000228872 CNIH1O95406 144 aa13.68□□□□□ -0.22
CDKN1B-201ENST00000228872 LAGE3Q14657 143 aa13.68□□□□□ -0.22
CDKN1B-201ENST00000228872 IGLV1-47P01700 117 aa13.68□□□□□ -0.22
CDKN1B-201ENST00000228872 IGFL4Q6B9Z1 124 aa13.68□□□□□ -0.22
CDKN1B-201ENST00000228872 DLX4Q92988 240 aaPredicted RBP13.68□□□□□ -0.22
CDKN1B-201ENST00000228872 RAB1BQ9H0U4 201 aa13.68□□□□□ -0.22
CDKN1B-201ENST00000228872 FABP5P3A8MUU1 101 aa13.67□□□□□ -0.22
CDKN1B-201ENST00000228872 HLA-DMBP28068 263 aa13.67□□□□□ -0.22
CDKN1B-201ENST00000228872 Q6ZUT4 128 aa13.67□□□□□ -0.22
CDKN1B-201ENST00000228872 IGHG4P01861 327 aa13.67□□□□□ -0.22
CDKN1B-201ENST00000228872 XGP55808 180 aa13.67□□□□□ -0.22
CDKN1B-201ENST00000228872 OR11H12B2RN74 326 aa13.67□□□□□ -0.22
CDKN1B-201ENST00000228872 TSPAN13O95857 204 aa13.67□□□□□ -0.22
CDKN1B-201ENST00000228872 EFNA4P52798 201 aa13.67□□□□□ -0.22
CDKN1B-201ENST00000228872 OR11H1Q8NG94 326 aa13.67□□□□□ -0.22
CDKN1B-201ENST00000228872 OR11H2Q8NH07 326 aa13.67□□□□□ -0.22
CDKN1B-201ENST00000228872 GLMPQ8WWB7 406 aa13.67□□□□□ -0.22
CDKN1B-201ENST00000228872 FAM90A27PA6NNH2 459 aa13.66□□□□□ -0.22
CDKN1B-201ENST00000228872 BUB1B-PAK6H3BSN5 160 aa13.66□□□□□ -0.22
CDKN1B-201ENST00000228872 TRGV3P03979 118 aa13.66□□□□□ -0.22
CDKN1B-201ENST00000228872 NRACQ8N912 160 aa13.66□□□□□ -0.22
CDKN1B-201ENST00000228872 MALRD1Q5VYJ5 2156 aa13.66□□□□□ -0.22
CDKN1B-201ENST00000228872 RPL7P18124 248 aaKnown RBP13.66□□□□□ -0.22
CDKN1B-201ENST00000228872 ITPR1Q14643 2758 aa13.65□□□□□ -0.22
CDKN1B-201ENST00000228872 F8VRH5 84 aa13.65□□□□□ -0.22
CDKN1B-201ENST00000228872 LGALS1P09382 135 aaKnown RBP13.65□□□□□ -0.22
CDKN1B-201ENST00000228872 H7C1H1 209 aa13.65□□□□□ -0.22
CDKN1B-201ENST00000228872 SMAD5-AS1Q9Y6J3 95 aa13.65□□□□□ -0.22
CDKN1B-201ENST00000228872 ATRXP46100 2492 aa13.64□□□□□ -0.23
CDKN1B-201ENST00000228872 TRAV12-1A0A0B4J245 112 aa13.64□□□□□ -0.23
CDKN1B-201ENST00000228872 TRAV26-2A0A0B4J265 109 aa13.64□□□□□ -0.23
CDKN1B-201ENST00000228872 ERCC8Q13216 396 aa13.64□□□□□ -0.23
CDKN1B-201ENST00000228872 RNF183Q96D59 192 aa13.64□□□□□ -0.23
CDKN1B-201ENST00000228872 KAAG1Q9UBP8 84 aa13.64□□□□□ -0.23
CDKN1B-201ENST00000228872 ERG28Q9UKR5 140 aa13.64□□□□□ -0.23
CDKN1B-201ENST00000228872 LRBAP50851 2863 aa13.63□□□□□ -0.23
CDKN1B-201ENST00000228872 LINC01549A6NIU2 74 aa13.63□□□□□ -0.23
CDKN1B-201ENST00000228872 GATA3P23771 443 aa13.63□□□□□ -0.23
CDKN1B-201ENST00000228872 PSMB2P49721 201 aa13.63□□□□□ -0.23
CDKN1B-201ENST00000228872 CFHR4Q92496 578 aa13.63□□□□□ -0.23
CDKN1B-201ENST00000228872 CARD19Q96LW7 228 aa13.63□□□□□ -0.23
CDKN1B-201ENST00000228872 IL17RELQ6ZVW7 336 aa13.63□□□□□ -0.23
CDKN1B-201ENST00000228872 DYNAPQ8N1N2 210 aa13.63□□□□□ -0.23
CDKN1B-201ENST00000228872 PTH2Q96A98 100 aa13.63□□□□□ -0.23
CDKN1B-201ENST00000228872 NBASA2RRP1 2371 aa13.62□□□□□ -0.23
CDKN1B-201ENST00000228872 F8W735 103 aaPredicted RBP13.62□□□□□ -0.23
CDKN1B-201ENST00000228872 MFAP4P55083 255 aa13.62□□□□□ -0.23
CDKN1B-201ENST00000228872 CDSNQ15517 529 aa13.62□□□□□ -0.23
CDKN1B-201ENST00000228872 C5orf64Q2M2E5 130 aa13.62□□□□□ -0.23
CDKN1B-201ENST00000228872 ZNF672Q499Z4 452 aaPredicted RBP13.62□□□□□ -0.23
CDKN1B-201ENST00000228872 RNF5Q99942 180 aa13.62□□□□□ -0.23
CDKN1B-201ENST00000228872 COX7A1P24310 79 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms