RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 ASPHD1Q5U4P2 390 aa10.49□□□□□ -0.73
COL1A1-201ENST00000225964 NBL1P41271 181 aa10.49□□□□□ -0.73
COL1A1-201ENST00000225964 LINC00311Q8N616 119 aa10.49□□□□□ -0.73
COL1A1-201ENST00000225964 VOPP1Q96AW1 172 aa10.49□□□□□ -0.73
COL1A1-201ENST00000225964 NDUFS7O75251 213 aa10.49□□□□□ -0.73
COL1A1-201ENST00000225964 PIFOQ8TCI5 191 aa10.49□□□□□ -0.73
COL1A1-201ENST00000225964 C1orf43Q9BWL3 253 aa10.49□□□□□ -0.73
COL1A1-201ENST00000225964 PKIGQ9Y2B9 76 aa10.49□□□□□ -0.73
COL1A1-201ENST00000225964 RTTNQ86VV8 2226 aa10.49□□□□□ -0.73
COL1A1-201ENST00000225964 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.48□□□□□ -0.73
COL1A1-201ENST00000225964 IGKV2-29A2NJV5 120 aaPredicted RBP10.48□□□□□ -0.73
COL1A1-201ENST00000225964 LYL1P12980 280 aa10.48□□□□□ -0.73
COL1A1-201ENST00000225964 TIRAPP58753 221 aa10.48□□□□□ -0.73
COL1A1-201ENST00000225964 F6UB75 175 aa10.48□□□□□ -0.73
COL1A1-201ENST00000225964 TINCRA0A1B0GVN0 87 aa10.48□□□□□ -0.73
COL1A1-201ENST00000225964 GNRH2O43555 120 aa10.48□□□□□ -0.73
COL1A1-201ENST00000225964 CFHR4Q92496 578 aa10.48□□□□□ -0.73
COL1A1-201ENST00000225964 ZNF503Q96F45 646 aa10.48□□□□□ -0.73
COL1A1-201ENST00000225964 ZC2HC1AQ96GY0 325 aa10.48□□□□□ -0.73
COL1A1-201ENST00000225964 TMEM14CQ9P0S9 112 aa10.48□□□□□ -0.73
COL1A1-201ENST00000225964 FAM215AQ9Y5M1 114 aa10.48□□□□□ -0.73
COL1A1-201ENST00000225964 H3BUA1 57 aa10.48□□□□□ -0.73
COL1A1-201ENST00000225964 FGF6P10767 208 aa10.48□□□□□ -0.73
COL1A1-201ENST00000225964 CCL18P55774 89 aa10.48□□□□□ -0.73
COL1A1-201ENST00000225964 ICOSQ9Y6W8 199 aa10.47□□□□□ -0.73
COL1A1-201ENST00000225964 SHISA9B4DS77 424 aa10.47□□□□□ -0.73
COL1A1-201ENST00000225964 WISP1O95388 367 aa10.47□□□□□ -0.73
COL1A1-201ENST00000225964 HELZP42694 1942 aaKnown RBP10.47□□□□□ -0.73
COL1A1-201ENST00000225964 HLA-DMBP28068 263 aa10.47□□□□□ -0.73
COL1A1-201ENST00000225964 IGLV1-44P01699 117 aa10.46□□□□□ -0.73
COL1A1-201ENST00000225964 C9orf153Q5TBE3 101 aa10.46□□□□□ -0.73
COL1A1-201ENST00000225964 PI4KAP42356 2102 aa10.46□□□□□ -0.73
COL1A1-201ENST00000225964 WT1-ASQ06250 92 aa10.46□□□□□ -0.74
COL1A1-201ENST00000225964 CT83Q5H943 113 aa10.46□□□□□ -0.74
COL1A1-201ENST00000225964 IGHV4-38-2P0DP08 117 aa10.46□□□□□ -0.74
COL1A1-201ENST00000225964 SDK2Q58EX2 2172 aa10.45□□□□□ -0.74
COL1A1-201ENST00000225964 IGHV4-30-2A0A087WSY4 118 aa10.45□□□□□ -0.74
COL1A1-201ENST00000225964 C15orf65H3BRN8 121 aa10.45□□□□□ -0.74
COL1A1-201ENST00000225964 ETDCA0A1B0GVM5 59 aa10.45□□□□□ -0.74
COL1A1-201ENST00000225964 OR11H6Q8NGC7 330 aa10.45□□□□□ -0.74
COL1A1-201ENST00000225964 C18orf32Q8TCD1 76 aa10.45□□□□□ -0.74
COL1A1-201ENST00000225964 GYPEP15421 78 aa10.45□□□□□ -0.74
COL1A1-201ENST00000225964 SRSF2Q01130 221 aaKnown RBP10.45□□□□□ -0.74
COL1A1-201ENST00000225964 TIMM17AQ99595 171 aa10.45□□□□□ -0.74
COL1A1-201ENST00000225964 NCOR1P1Q9H4R4 102 aa10.45□□□□□ -0.74
COL1A1-201ENST00000225964 FAM231BA6NCW3 169 aa10.44□□□□□ -0.74
COL1A1-201ENST00000225964 IGHV2-70P01814 119 aa10.44□□□□□ -0.74
COL1A1-201ENST00000225964 C16orf74Q96GX8 76 aa10.44□□□□□ -0.74
COL1A1-201ENST00000225964 FOXE3Q13461 319 aa10.44□□□□□ -0.74
COL1A1-201ENST00000225964 C17orf77Q96MU5 243 aa10.44□□□□□ -0.74
COL1A1-201ENST00000225964 SIGLEC8Q9NYZ4 499 aa10.44□□□□□ -0.74
COL1A1-201ENST00000225964 PIP4P1Q86T03 277 aa10.44□□□□□ -0.74
COL1A1-201ENST00000225964 KIAA2026Q5HYC2 2103 aa10.44□□□□□ -0.74
COL1A1-201ENST00000225964 NRGNQ92686 78 aa10.44□□□□□ -0.74
COL1A1-201ENST00000225964 IGLV10-54A0A075B6I4 117 aa10.44□□□□□ -0.74
COL1A1-201ENST00000225964 SMIM27A0A1W2PRY6 76 aa10.44□□□□□ -0.74
COL1A1-201ENST00000225964 UTF1Q5T230 341 aa10.44□□□□□ -0.74
COL1A1-201ENST00000225964 NPYP01303 97 aa10.43□□□□□ -0.74
COL1A1-201ENST00000225964 SPART-AS1P0CW21 52 aa10.43□□□□□ -0.74
COL1A1-201ENST00000225964 ARTNQ5T4W7 220 aa10.43□□□□□ -0.74
COL1A1-201ENST00000225964 ESM1Q9NQ30 184 aa10.43□□□□□ -0.74
COL1A1-201ENST00000225964 CAMK2N2Q96S95 79 aa10.43□□□□□ -0.74
COL1A1-201ENST00000225964 K7EM74 188 aa10.43□□□□□ -0.74
COL1A1-201ENST00000225964 Q0VG73 95 aa10.43□□□□□ -0.74
COL1A1-201ENST00000225964 IGHV4-61A0A0C4DH41 118 aa10.43□□□□□ -0.74
COL1A1-201ENST00000225964 DYNAPQ8N1N2 210 aa10.43□□□□□ -0.74
COL1A1-201ENST00000225964 CFPP27918 469 aa10.42□□□□□ -0.74
COL1A1-201ENST00000225964 FXYD5Q96DB9 178 aa10.42□□□□□ -0.74
COL1A1-201ENST00000225964 CLPSL1A2RUU4 121 aa10.42□□□□□ -0.74
COL1A1-201ENST00000225964 WIPF3A6NGB9 483 aa10.42□□□□□ -0.74
COL1A1-201ENST00000225964 UBE2V1Q13404 147 aa10.42□□□□□ -0.74
COL1A1-201ENST00000225964 CEND1Q8N111 149 aa10.42□□□□□ -0.74
COL1A1-201ENST00000225964 CARD19Q96LW7 228 aa10.42□□□□□ -0.74
COL1A1-201ENST00000225964 PYGO2Q9BRQ0 406 aa10.42□□□□□ -0.74
COL1A1-201ENST00000225964 RSPO3Q9BXY4 272 aaPredicted RBP10.42□□□□□ -0.74
COL1A1-201ENST00000225964 IGLC1P0CG04 106 aa10.42□□□□□ -0.74
COL1A1-201ENST00000225964 C5orf38Q86SI9 138 aa10.42□□□□□ -0.74
COL1A1-201ENST00000225964 BOD1L2Q8IYS8 172 aa10.42□□□□□ -0.74
COL1A1-201ENST00000225964 TRBV20-1A0A075B6N2 111 aa10.42□□□□□ -0.74
COL1A1-201ENST00000225964 K7EQD1 137 aa10.42□□□□□ -0.74
COL1A1-201ENST00000225964 MRPL35Q9NZE8 188 aaKnown RBP10.42□□□□□ -0.74
COL1A1-201ENST00000225964 FHL1Q13642 323 aa10.42□□□□□ -0.74
COL1A1-201ENST00000225964 DLEU1O43261 78 aa10.41□□□□□ -0.74
COL1A1-201ENST00000225964 IGHV4-28A0A0C4DH34 117 aa10.41□□□□□ -0.74
COL1A1-201ENST00000225964 MAJINQ3KP22 176 aa10.41□□□□□ -0.74
COL1A1-201ENST00000225964 SPRY2O43597 315 aa10.41□□□□□ -0.74
COL1A1-201ENST00000225964 MRPL23Q16540 153 aaKnown RBP10.41□□□□□ -0.74
COL1A1-201ENST00000225964 SLC25A29Q8N8R3 303 aa10.41□□□□□ -0.74
COL1A1-201ENST00000225964 J3QQQ9 107 aa10.41□□□□□ -0.74
COL1A1-201ENST00000225964 NCKAP5O14513 1909 aa10.4□□□□□ -0.74
COL1A1-201ENST00000225964 UBE2AP49459 152 aa10.4□□□□□ -0.74
COL1A1-201ENST00000225964 ZNF124Q15973 351 aa10.4□□□□□ -0.74
COL1A1-201ENST00000225964 ZNF664Q8N3J9 261 aa10.4□□□□□ -0.74
COL1A1-201ENST00000225964 KLK5Q9Y337 293 aaPredicted RBP10.4□□□□□ -0.74
COL1A1-201ENST00000225964 V9GYV3 84 aa10.4□□□□□ -0.74
COL1A1-201ENST00000225964 PLXNA4Q9HCM2 1894 aa10.4□□□□□ -0.74
COL1A1-201ENST00000225964 POLR3KQ9Y2Y1 108 aaPredicted RBP10.4□□□□□ -0.74
COL1A1-201ENST00000225964 CHKB-CPT1BH3BT56 60 aa10.4□□□□□ -0.74
COL1A1-201ENST00000225964 ZNF726P1Q15940 193 aa10.4□□□□□ -0.75
COL1A1-201ENST00000225964 CTSZQ9UBR2 303 aa10.4□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms