RNA–Protein interactions for RNA: ENST00000222402.7

UBE2D4-201, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2D4, Length 3,974 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-201ENST00000222402 ZNF48Q96MX3 618 aaPredicted RBP11.6□□□□□ -0.55
UBE2D4-201ENST00000222402 PEF1Q9UBV8 284 aaKnown RBP11.6□□□□□ -0.55
UBE2D4-201ENST00000222402 A0A0G2JLM5 398 aa11.6□□□□□ -0.55
UBE2D4-201ENST00000222402 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.6□□□□□ -0.55
UBE2D4-201ENST00000222402 C9orf139Q6ZV77 190 aa11.6□□□□□ -0.55
UBE2D4-201ENST00000222402 GTF2H5Q6ZYL4 71 aa11.6□□□□□ -0.55
UBE2D4-201ENST00000222402 URB1-AS1Q96HZ7 61 aa11.6□□□□□ -0.55
UBE2D4-201ENST00000222402 ATP5LO75964 103 aa11.59□□□□□ -0.55
UBE2D4-201ENST00000222402 GATA1P15976 413 aaPredicted RBP11.59□□□□□ -0.55
UBE2D4-201ENST00000222402 NAA38Q9BRA0 125 aaKnown RBP11.59□□□□□ -0.55
UBE2D4-201ENST00000222402 MYO9AB2RTY4 2548 aa11.59□□□□□ -0.55
UBE2D4-201ENST00000222402 TRAV21A0A0B4J279 112 aa11.59□□□□□ -0.55
UBE2D4-201ENST00000222402 UBE2V1Q13404 147 aa11.59□□□□□ -0.55
UBE2D4-201ENST00000222402 AMMECR1LQ6DCA0 310 aa11.59□□□□□ -0.55
UBE2D4-201ENST00000222402 USP9XQ93008 2570 aaPredicted RBP11.59□□□□□ -0.55
UBE2D4-201ENST00000222402 GAGE1Q13065 139 aa11.59□□□□□ -0.55
UBE2D4-201ENST00000222402 SPATA12Q7Z6I5 190 aa11.59□□□□□ -0.55
UBE2D4-201ENST00000222402 TRAV26-2A0A0B4J265 109 aa11.58□□□□□ -0.56
UBE2D4-201ENST00000222402 OR4X2Q8NGF9 303 aa11.58□□□□□ -0.56
UBE2D4-201ENST00000222402 PTPN13Q12923 2485 aa11.58□□□□□ -0.56
UBE2D4-201ENST00000222402 FAM223BA6NKX1 122 aa11.58□□□□□ -0.56
UBE2D4-201ENST00000222402 FOXE3Q13461 319 aa11.58□□□□□ -0.56
UBE2D4-201ENST00000222402 FAM159AQ6UWV7 190 aa11.58□□□□□ -0.56
UBE2D4-201ENST00000222402 FAM223AQ8IWN6 122 aa11.58□□□□□ -0.56
UBE2D4-201ENST00000222402 PIP4P2Q8N4L2 257 aa11.58□□□□□ -0.56
UBE2D4-201ENST00000222402 LMO4P61968 165 aa11.58□□□□□ -0.56
UBE2D4-201ENST00000222402 FAM74A4Q5TZK3 123 aa11.58□□□□□ -0.56
UBE2D4-201ENST00000222402 A0A1W2PPR1 153 aa11.57□□□□□ -0.56
UBE2D4-201ENST00000222402 IGHV4-39P01824 125 aa11.57□□□□□ -0.56
UBE2D4-201ENST00000222402 LINC01545Q5VT33 79 aa11.57□□□□□ -0.56
UBE2D4-201ENST00000222402 OR2K2Q8NGT1 345 aa11.57□□□□□ -0.56
UBE2D4-201ENST00000222402 ITLN2Q8WWU7 325 aaPredicted RBP11.57□□□□□ -0.56
UBE2D4-201ENST00000222402 IGHV4-61A0A0C4DH41 118 aa11.57□□□□□ -0.56
UBE2D4-201ENST00000222402 SPRY2O43597 315 aa11.57□□□□□ -0.56
UBE2D4-201ENST00000222402 TLN2Q9Y4G6 2542 aa11.57□□□□□ -0.56
UBE2D4-201ENST00000222402 OVOL3O00110 214 aa11.57□□□□□ -0.56
UBE2D4-201ENST00000222402 COX8AP10176 69 aa11.57□□□□□ -0.56
UBE2D4-201ENST00000222402 GTSCR1Q86UQ5 136 aa11.57□□□□□ -0.56
UBE2D4-201ENST00000222402 DEFB104AQ8WTQ1 72 aa11.57□□□□□ -0.56
UBE2D4-201ENST00000222402 ATMQ13315 3056 aa11.56□□□□□ -0.56
UBE2D4-201ENST00000222402 H3BUT2 72 aa11.56□□□□□ -0.56
UBE2D4-201ENST00000222402 SMAD5-AS1Q9Y6J3 95 aa11.56□□□□□ -0.56
UBE2D4-201ENST00000222402 EBI3Q14213 229 aa11.56□□□□□ -0.56
UBE2D4-201ENST00000222402 BVES-AS1Q5T3Y7 98 aa11.56□□□□□ -0.56
UBE2D4-201ENST00000222402 C5orf56Q8N8D9 126 aa11.56□□□□□ -0.56
UBE2D4-201ENST00000222402 SCGB3A1Q96QR1 104 aa11.56□□□□□ -0.56
UBE2D4-201ENST00000222402 RHPN1-AS1Q9BWJ2 59 aa11.56□□□□□ -0.56
UBE2D4-201ENST00000222402 OVOL1O14753 267 aa11.56□□□□□ -0.56
UBE2D4-201ENST00000222402 DPM2O94777 84 aa11.56□□□□□ -0.56
UBE2D4-201ENST00000222402 IGKCP01834 107 aa11.56□□□□□ -0.56
UBE2D4-201ENST00000222402 SCGB1D4Q6XE38 83 aa11.56□□□□□ -0.56
UBE2D4-201ENST00000222402 C14orf178Q8N769 122 aaPredicted RBP11.56□□□□□ -0.56
UBE2D4-201ENST00000222402 CCDC140Q96MF4 163 aa11.56□□□□□ -0.56
UBE2D4-201ENST00000222402 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.55□□□□□ -0.56
UBE2D4-201ENST00000222402 MRPS12O15235 138 aaKnown RBP11.55□□□□□ -0.56
UBE2D4-201ENST00000222402 LGALS9BQ3B8N2 356 aa11.55□□□□□ -0.56
UBE2D4-201ENST00000222402 ANKRD39Q53RE8 183 aa11.55□□□□□ -0.56
UBE2D4-201ENST00000222402 LGALS9CQ6DKI2 356 aa11.55□□□□□ -0.56
UBE2D4-201ENST00000222402 Q8N6K4 173 aa11.55□□□□□ -0.56
UBE2D4-201ENST00000222402 DKK2Q9UBU2 259 aa11.55□□□□□ -0.56
UBE2D4-201ENST00000222402 C19orf84I3L1E1 186 aa11.55□□□□□ -0.56
UBE2D4-201ENST00000222402 TGFAP01135 160 aa11.55□□□□□ -0.56
UBE2D4-201ENST00000222402 SRSF1Q07955 248 aaKnown RBP eCLIP11.55□□□□□ -0.56
UBE2D4-201ENST00000222402 LAGE3Q14657 143 aa11.55□□□□□ -0.56
UBE2D4-201ENST00000222402 LINC00477Q96M19 166 aa11.55□□□□□ -0.56
UBE2D4-201ENST00000222402 ZFYVE26Q68DK2 2539 aa11.54□□□□□ -0.56
UBE2D4-201ENST00000222402 F8W735 103 aaPredicted RBP11.54□□□□□ -0.56
UBE2D4-201ENST00000222402 IGHV4-38-2P0DP08 117 aa11.54□□□□□ -0.56
UBE2D4-201ENST00000222402 ZC2HC1BQ5TFG8 222 aa11.54□□□□□ -0.56
UBE2D4-201ENST00000222402 NAV2Q8IVL1 2488 aa11.54□□□□□ -0.56
UBE2D4-201ENST00000222402 SEC11AP67812 179 aa11.54□□□□□ -0.56
UBE2D4-201ENST00000222402 ZNF493Q6ZR52 646 aa11.54□□□□□ -0.56
UBE2D4-201ENST00000222402 F6UB75 175 aa11.53□□□□□ -0.56
UBE2D4-201ENST00000222402 SMAD7O15105 426 aaKnown RBP11.53□□□□□ -0.56
UBE2D4-201ENST00000222402 DEFB1P60022 68 aa11.53□□□□□ -0.56
UBE2D4-201ENST00000222402 USMG5Q96IX5 58 aa11.53□□□□□ -0.56
UBE2D4-201ENST00000222402 SCRT2Q9NQ03 307 aa11.53□□□□□ -0.56
UBE2D4-201ENST00000222402 OR9G4Q8NGQ1 327 aa11.53□□□□□ -0.56
UBE2D4-201ENST00000222402 OR1N2Q8NGR9 330 aa11.53□□□□□ -0.56
UBE2D4-201ENST00000222402 HIST1H4GQ99525 98 aa11.53□□□□□ -0.56
UBE2D4-201ENST00000222402 CD5LO43866 347 aa11.53□□□□□ -0.56
UBE2D4-201ENST00000222402 MSMBP08118 114 aa11.53□□□□□ -0.56
UBE2D4-201ENST00000222402 HSD52Q0P140 79 aa11.53□□□□□ -0.56
UBE2D4-201ENST00000222402 ARL6IP6Q8N6S5 226 aa11.53□□□□□ -0.56
UBE2D4-201ENST00000222402 CCDC168Q8NDH2 2452 aa11.53□□□□□ -0.56
UBE2D4-201ENST00000222402 CD7P09564 240 aa11.52□□□□□ -0.56
UBE2D4-201ENST00000222402 BLCAPP62952 87 aa11.52□□□□□ -0.56
UBE2D4-201ENST00000222402 RPL24P83731 157 aaKnown RBP11.52□□□□□ -0.56
UBE2D4-201ENST00000222402 OR11H12B2RN74 326 aa11.52□□□□□ -0.57
UBE2D4-201ENST00000222402 CCL25O15444 150 aa11.52□□□□□ -0.57
UBE2D4-201ENST00000222402 FABP2P12104 132 aa11.52□□□□□ -0.57
UBE2D4-201ENST00000222402 OR11H1Q8NG94 326 aa11.52□□□□□ -0.57
UBE2D4-201ENST00000222402 OR11H2Q8NH07 326 aa11.52□□□□□ -0.57
UBE2D4-201ENST00000222402 LAMA5O15230 3695 aa11.52□□□□□ -0.57
UBE2D4-201ENST00000222402 TACC2O95359 2948 aa11.52□□□□□ -0.57
UBE2D4-201ENST00000222402 CRXO43186 299 aaPredicted RBP11.52□□□□□ -0.57
UBE2D4-201ENST00000222402 ZNF688P0C7X2 276 aa11.52□□□□□ -0.57
UBE2D4-201ENST00000222402 RBAKDNA6NC62 111 aa11.52□□□□□ -0.57
UBE2D4-201ENST00000222402 B4DSR2 109 aa11.52□□□□□ -0.57
UBE2D4-201ENST00000222402 MAPK1IP1LQ8NDC0 245 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 98.8 ms