RNA–Protein interactions for RNA: ENST00000217315.9

TM9SF4-201, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2 BASIC

Gene TM9SF4, Length 4,032 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-201ENST00000217315 H3BUT2 72 aa9.64□□□□□ -0.87
TM9SF4-201ENST00000217315 NPSP0C0P6 89 aa9.64□□□□□ -0.87
TM9SF4-201ENST00000217315 AGPAT4-IT1Q9H0P7 198 aa9.64□□□□□ -0.87
TM9SF4-201ENST00000217315 MSRB1Q9NZV6 116 aa9.64□□□□□ -0.87
TM9SF4-201ENST00000217315 ABCA2Q9BZC7 2435 aa9.64□□□□□ -0.87
TM9SF4-201ENST00000217315 WI2-2373I1.2A0A1W2PRP0 233 aa9.64□□□□□ -0.87
TM9SF4-201ENST00000217315 DPM2O94777 84 aa9.64□□□□□ -0.87
TM9SF4-201ENST00000217315 Q1RN00 199 aa9.64□□□□□ -0.87
TM9SF4-201ENST00000217315 GTSCR1Q86UQ5 136 aa9.64□□□□□ -0.87
TM9SF4-201ENST00000217315 CFHR4Q92496 578 aa9.64□□□□□ -0.87
TM9SF4-201ENST00000217315 K7ERU9 68 aa9.63□□□□□ -0.87
TM9SF4-201ENST00000217315 MRPL52Q86TS9 123 aaKnown RBP9.63□□□□□ -0.87
TM9SF4-201ENST00000217315 DTX2Q86UW9 622 aa9.63□□□□□ -0.87
TM9SF4-201ENST00000217315 FRYQ5TBA9 3013 aa9.63□□□□□ -0.87
TM9SF4-201ENST00000217315 IGHV4-61A0A0C4DH41 118 aa9.63□□□□□ -0.87
TM9SF4-201ENST00000217315 TNFRSF13BO14836 293 aaPredicted RBP9.63□□□□□ -0.87
TM9SF4-201ENST00000217315 Q6ZVH6 145 aa9.63□□□□□ -0.87
TM9SF4-201ENST00000217315 USMG5Q96IX5 58 aa9.63□□□□□ -0.87
TM9SF4-201ENST00000217315 LINC00477Q96M19 166 aa9.63□□□□□ -0.87
TM9SF4-201ENST00000217315 PRSS22Q9GZN4 317 aa9.63□□□□□ -0.87
TM9SF4-201ENST00000217315 NBEAQ8NFP9 2946 aa9.63□□□□□ -0.87
TM9SF4-201ENST00000217315 J3QR89 54 aa9.63□□□□□ -0.87
TM9SF4-201ENST00000217315 OR1N2Q8NGR9 330 aa9.63□□□□□ -0.87
TM9SF4-201ENST00000217315 OR2K2Q8NGT1 345 aa9.63□□□□□ -0.87
TM9SF4-201ENST00000217315 NACAE9PAV3 2078 aa9.63□□□□□ -0.87
TM9SF4-201ENST00000217315 PRAC2D3DTV9 90 aa9.62□□□□□ -0.87
TM9SF4-201ENST00000217315 IGKCP01834 107 aa9.62□□□□□ -0.87
TM9SF4-201ENST00000217315 PAX1P15863 534 aa9.62□□□□□ -0.87
TM9SF4-201ENST00000217315 AMMECR1LQ6DCA0 310 aa9.62□□□□□ -0.87
TM9SF4-201ENST00000217315 POLQO75417 2590 aa9.62□□□□□ -0.87
TM9SF4-201ENST00000217315 TRAV26-2A0A0B4J265 109 aa9.62□□□□□ -0.87
TM9SF4-201ENST00000217315 LAGE3Q14657 143 aa9.62□□□□□ -0.87
TM9SF4-201ENST00000217315 TMEM170BQ5T4T1 132 aa9.62□□□□□ -0.87
TM9SF4-201ENST00000217315 A0A1B0GXF2 115 aa9.62□□□□□ -0.87
TM9SF4-201ENST00000217315 SPRY2O43597 315 aa9.62□□□□□ -0.87
TM9SF4-201ENST00000217315 BUB3O43684 328 aa9.62□□□□□ -0.87
TM9SF4-201ENST00000217315 IGHV4-39P01824 125 aa9.62□□□□□ -0.87
TM9SF4-201ENST00000217315 FREM2Q5SZK8 3169 aa9.61□□□□□ -0.87
TM9SF4-201ENST00000217315 TRAV12-3A0A0B4J271 114 aa9.61□□□□□ -0.87
TM9SF4-201ENST00000217315 LY6LH3BQJ8 138 aa9.61□□□□□ -0.87
TM9SF4-201ENST00000217315 LDLRAD2Q5SZI1 272 aa9.61□□□□□ -0.87
TM9SF4-201ENST00000217315 ZC2HC1BQ5TFG8 222 aa9.61□□□□□ -0.87
TM9SF4-201ENST00000217315 ORAOV1Q8WV07 137 aa9.61□□□□□ -0.87
TM9SF4-201ENST00000217315 ZNF747Q9BV97 191 aa9.61□□□□□ -0.87
TM9SF4-201ENST00000217315 SMIM13P0DJ93 91 aa9.61□□□□□ -0.87
TM9SF4-201ENST00000217315 MYCNOSP40205 109 aa9.61□□□□□ -0.87
TM9SF4-201ENST00000217315 DAZ1Q9NQZ3 744 aaKnown RBP9.61□□□□□ -0.87
TM9SF4-201ENST00000217315 LINC01548A6NM66 108 aa9.61□□□□□ -0.87
TM9SF4-201ENST00000217315 FOXE3Q13461 319 aa9.61□□□□□ -0.87
TM9SF4-201ENST00000217315 ITLN2Q8WWU7 325 aaPredicted RBP9.61□□□□□ -0.87
TM9SF4-201ENST00000217315 SIRPDQ9H106 197 aa9.61□□□□□ -0.87
TM9SF4-201ENST00000217315 PPP1R17O96001 155 aa9.6□□□□□ -0.87
TM9SF4-201ENST00000217315 GATA1P15976 413 aaPredicted RBP9.6□□□□□ -0.87
TM9SF4-201ENST00000217315 RNF114Q9Y508 228 aa9.6□□□□□ -0.87
TM9SF4-201ENST00000217315 ODF3BA8MYP8 253 aa9.6□□□□□ -0.87
TM9SF4-201ENST00000217315 SMAD7O15105 426 aaKnown RBP9.6□□□□□ -0.87
TM9SF4-201ENST00000217315 NHP2Q9NX24 153 aaKnown RBP9.6□□□□□ -0.87
TM9SF4-201ENST00000217315 F6UB75 175 aa9.6□□□□□ -0.87
TM9SF4-201ENST00000217315 IGHV4-38-2P0DP08 117 aa9.6□□□□□ -0.87
TM9SF4-201ENST00000217315 LINC00310P59036 64 aa9.6□□□□□ -0.87
TM9SF4-201ENST00000217315 BLCAPP62952 87 aa9.6□□□□□ -0.87
TM9SF4-201ENST00000217315 C11orf44Q8N8P7 122 aa9.6□□□□□ -0.87
TM9SF4-201ENST00000217315 COX11Q9Y6N1 276 aa9.6□□□□□ -0.87
TM9SF4-201ENST00000217315 ZNF292O60281 2723 aa9.6□□□□□ -0.87
TM9SF4-201ENST00000217315 LOC107984156A0A0G2JMH3 177 aa9.59□□□□□ -0.87
TM9SF4-201ENST00000217315 ARL17AQ8IVW1 177 aa9.59□□□□□ -0.87
TM9SF4-201ENST00000217315 ORMDL2Q53FV1 153 aa9.59□□□□□ -0.87
TM9SF4-201ENST00000217315 NDUFS8O00217 210 aa9.59□□□□□ -0.87
TM9SF4-201ENST00000217315 JMJD8Q96S16 334 aa9.59□□□□□ -0.87
TM9SF4-201ENST00000217315 RAI1Q7Z5J4 1906 aaPredicted RBP9.59□□□□□ -0.87
TM9SF4-201ENST00000217315 DPH3P1Q9H4G8 78 aa9.59□□□□□ -0.87
TM9SF4-201ENST00000217315 SYNJ2BPP57105 145 aa9.58□□□□□ -0.88
TM9SF4-201ENST00000217315 SEC11AP67812 179 aa9.58□□□□□ -0.88
TM9SF4-201ENST00000217315 HSD52Q0P140 79 aa9.58□□□□□ -0.88
TM9SF4-201ENST00000217315 C2orf70A6NJV1 201 aa9.58□□□□□ -0.88
TM9SF4-201ENST00000217315 VWC2LB2RUY7 222 aa9.58□□□□□ -0.88
TM9SF4-201ENST00000217315 LMO4P61968 165 aa9.58□□□□□ -0.88
TM9SF4-201ENST00000217315 UBE2V1Q13404 147 aa9.58□□□□□ -0.88
TM9SF4-201ENST00000217315 PIP4P2Q8N4L2 257 aa9.58□□□□□ -0.88
TM9SF4-201ENST00000217315 OR9G4Q8NGQ1 327 aa9.58□□□□□ -0.88
TM9SF4-201ENST00000217315 SPCS1Q9Y6A9 102 aa9.58□□□□□ -0.88
TM9SF4-201ENST00000217315 IGHV4-30-2A0A087WSY4 118 aa9.58□□□□□ -0.88
TM9SF4-201ENST00000217315 A0A087WWL8 130 aa9.58□□□□□ -0.88
TM9SF4-201ENST00000217315 USP34Q70CQ2 3546 aa9.57□□□□□ -0.88
TM9SF4-201ENST00000217315 NDUFA4O00483 81 aa9.57□□□□□ -0.88
TM9SF4-201ENST00000217315 PSMB2P49721 201 aa9.57□□□□□ -0.88
TM9SF4-201ENST00000217315 TMEM95Q3KNT9 176 aa9.57□□□□□ -0.88
TM9SF4-201ENST00000217315 C5orf56Q8N8D9 126 aa9.57□□□□□ -0.88
TM9SF4-201ENST00000217315 CYSLTR1Q9Y271 337 aa9.57□□□□□ -0.88
TM9SF4-201ENST00000217315 DEFB1P60022 68 aa9.57□□□□□ -0.88
TM9SF4-201ENST00000217315 ANXA2RQ3ZCQ2 193 aa9.57□□□□□ -0.88
TM9SF4-201ENST00000217315 NRGNQ92686 78 aa9.57□□□□□ -0.88
TM9SF4-201ENST00000217315 H7C2G1 150 aa9.57□□□□□ -0.88
TM9SF4-201ENST00000217315 C19orf84I3L1E1 186 aa9.57□□□□□ -0.88
TM9SF4-201ENST00000217315 ZNF80P51504 273 aaPredicted RBP9.57□□□□□ -0.88
TM9SF4-201ENST00000217315 SAMD13Q5VXD3 122 aa9.57□□□□□ -0.88
TM9SF4-201ENST00000217315 DKK2Q9UBU2 259 aa9.57□□□□□ -0.88
TM9SF4-201ENST00000217315 CHTOPQ9Y3Y2 248 aaKnown RBP9.57□□□□□ -0.88
TM9SF4-201ENST00000217315 A0A1W2PRX2 142 aa9.56□□□□□ -0.88
TM9SF4-201ENST00000217315 RNF223E7ERA6 249 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms