RNA–Protein interactions for RNA: ENST00000216877.10

PTPRA-201, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-201ENST00000216877 CGB1A6NKQ9 187 aa11.53□□□□□ -0.56
PTPRA-201ENST00000216877 SCGB3A1Q96QR1 104 aa11.53□□□□□ -0.56
PTPRA-201ENST00000216877 SCNM1Q9BWG6 230 aa11.53□□□□□ -0.56
PTPRA-201ENST00000216877 TLN1Q9Y490 2541 aaKnown RBP11.53□□□□□ -0.56
PTPRA-201ENST00000216877 TRAV2A0A0B4J234 112 aa11.53□□□□□ -0.56
PTPRA-201ENST00000216877 ATP5IP56385 69 aaPredicted RBP11.53□□□□□ -0.56
PTPRA-201ENST00000216877 ZCCHC24Q8N2G6 241 aaKnown RBP11.53□□□□□ -0.56
PTPRA-201ENST00000216877 C10orf126Q8N4M7 172 aa11.53□□□□□ -0.56
PTPRA-201ENST00000216877 IGLV2-11P01706 119 aa11.52□□□□□ -0.56
PTPRA-201ENST00000216877 PTPRBP23467 1997 aa11.52□□□□□ -0.56
PTPRA-201ENST00000216877 TRBV7-3A0A075B6L6 115 aa11.52□□□□□ -0.57
PTPRA-201ENST00000216877 LOC107984640A0A0U1RRK4 108 aa11.52□□□□□ -0.57
PTPRA-201ENST00000216877 A0A1W2PPI3 338 aa11.52□□□□□ -0.57
PTPRA-201ENST00000216877 HES1Q14469 280 aa11.52□□□□□ -0.57
PTPRA-201ENST00000216877 C17orf58Q2M2W7 97 aa11.52□□□□□ -0.57
PTPRA-201ENST00000216877 NGBQ9NPG2 151 aa11.52□□□□□ -0.57
PTPRA-201ENST00000216877 IGHV3-35A0A0C4DH35 117 aa11.52□□□□□ -0.57
PTPRA-201ENST00000216877 PLEKHB2Q96CS7 222 aa11.52□□□□□ -0.57
PTPRA-201ENST00000216877 ACACBO00763 2458 aa11.52□□□□□ -0.57
PTPRA-201ENST00000216877 LGALS1P09382 135 aaKnown RBP11.51□□□□□ -0.57
PTPRA-201ENST00000216877 EGR2P11161 476 aaPredicted RBP11.51□□□□□ -0.57
PTPRA-201ENST00000216877 TNFRSF13BO14836 293 aaPredicted RBP11.51□□□□□ -0.57
PTPRA-201ENST00000216877 CCL3L1P16619 93 aa11.51□□□□□ -0.57
PTPRA-201ENST00000216877 VMA21Q3ZAQ7 101 aa11.51□□□□□ -0.57
PTPRA-201ENST00000216877 TRGV9Q99603 122 aa11.51□□□□□ -0.57
PTPRA-201ENST00000216877 TRGV5A0A0B4J1U4 118 aa11.51□□□□□ -0.57
PTPRA-201ENST00000216877 CRIP2P52943 208 aaPredicted RBP11.51□□□□□ -0.57
PTPRA-201ENST00000216877 SPRNQ5BIV9 151 aa11.51□□□□□ -0.57
PTPRA-201ENST00000216877 CTSZQ9UBR2 303 aa11.5□□□□□ -0.57
PTPRA-201ENST00000216877 A0A087WX48 190 aa11.5□□□□□ -0.57
PTPRA-201ENST00000216877 ZNF785A8K8V0 405 aa11.5□□□□□ -0.57
PTPRA-201ENST00000216877 HERVK_113P61574 105 aa11.5□□□□□ -0.57
PTPRA-201ENST00000216877 Q0VFX4 171 aa11.5□□□□□ -0.57
PTPRA-201ENST00000216877 LAGE3Q14657 143 aa11.5□□□□□ -0.57
PTPRA-201ENST00000216877 TEX49A0A1B0GTD5 131 aa11.5□□□□□ -0.57
PTPRA-201ENST00000216877 TTTY12Q9BZ98 90 aa11.5□□□□□ -0.57
PTPRA-201ENST00000216877 RAB1BQ9H0U4 201 aa11.5□□□□□ -0.57
PTPRA-201ENST00000216877 PLNP26678 52 aa11.49□□□□□ -0.57
PTPRA-201ENST00000216877 RPL27AP46776 148 aaKnown RBP11.49□□□□□ -0.57
PTPRA-201ENST00000216877 ZNF493Q6ZR52 646 aa11.49□□□□□ -0.57
PTPRA-201ENST00000216877 H7C1H1 209 aa11.49□□□□□ -0.57
PTPRA-201ENST00000216877 FSTL3O95633 263 aa11.49□□□□□ -0.57
PTPRA-201ENST00000216877 C9orf153Q5TBE3 101 aa11.49□□□□□ -0.57
PTPRA-201ENST00000216877 OR4C13Q8NGP0 309 aa11.49□□□□□ -0.57
PTPRA-201ENST00000216877 SPRY2O43597 315 aa11.48□□□□□ -0.57
PTPRA-201ENST00000216877 OR10J6PQ8NGY7 276 aa11.48□□□□□ -0.57
PTPRA-201ENST00000216877 SRD5A1P18405 259 aa11.48□□□□□ -0.57
PTPRA-201ENST00000216877 IGHV1-2P23083 117 aa11.48□□□□□ -0.57
PTPRA-201ENST00000216877 MZT1Q08AG7 82 aa11.48□□□□□ -0.57
PTPRA-201ENST00000216877 Q8N1Y9 231 aa11.48□□□□□ -0.57
PTPRA-201ENST00000216877 FAM57AQ8TBR7 257 aa11.48□□□□□ -0.57
PTPRA-201ENST00000216877 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.48□□□□□ -0.579e-12■■■■■ 45
PTPRA-201ENST00000216877 TRBV19A0A075B6N1 114 aa11.48□□□□□ -0.57
PTPRA-201ENST00000216877 LINC00694P0DN24 101 aa11.48□□□□□ -0.57
PTPRA-201ENST00000216877 TCF15Q12870 199 aa11.48□□□□□ -0.57
PTPRA-201ENST00000216877 TMEM170BQ5T4T1 132 aa11.48□□□□□ -0.57
PTPRA-201ENST00000216877 SPANXN1Q5VSR9 72 aa11.48□□□□□ -0.57
PTPRA-201ENST00000216877 DTX2Q86UW9 622 aa11.48□□□□□ -0.57
PTPRA-201ENST00000216877 DCHS1Q96JQ0 3298 aa11.47□□□□□ -0.57
PTPRA-201ENST00000216877 SHISA9B4DS77 424 aa11.47□□□□□ -0.57
PTPRA-201ENST00000216877 F8VRH5 84 aa11.47□□□□□ -0.57
PTPRA-201ENST00000216877 POU2AF1Q16633 256 aa11.47□□□□□ -0.57
PTPRA-201ENST00000216877 THAP8Q8NA92 274 aa11.47□□□□□ -0.57
PTPRA-201ENST00000216877 SRRM5B3KS81 715 aa11.47□□□□□ -0.57
PTPRA-201ENST00000216877 CECR9P0C854 216 aa11.46□□□□□ -0.57
PTPRA-201ENST00000216877 IGHV3-64A0A075B6Q5 118 aa11.46□□□□□ -0.57
PTPRA-201ENST00000216877 ZMAT4Q9H898 229 aa11.46□□□□□ -0.57
PTPRA-201ENST00000216877 U3KQK5 164 aa11.46□□□□□ -0.57
PTPRA-201ENST00000216877 NDUFA11Q86Y39 141 aa11.46□□□□□ -0.58
PTPRA-201ENST00000216877 RITA1Q96K30 269 aa11.46□□□□□ -0.58
PTPRA-201ENST00000216877 ANKRD11Q6UB99 2663 aaPredicted RBP11.45□□□□□ -0.58
PTPRA-201ENST00000216877 PRSS2P07478 247 aa11.45□□□□□ -0.58
PTPRA-201ENST00000216877 C21orf62Q9NYP8 219 aa11.45□□□□□ -0.58
PTPRA-201ENST00000216877 ASIPP42127 132 aa11.45□□□□□ -0.58
PTPRA-201ENST00000216877 DLX1P56177 255 aa11.45□□□□□ -0.58
PTPRA-201ENST00000216877 Q8N8P6 123 aa11.45□□□□□ -0.58
PTPRA-201ENST00000216877 CENPVL3A0A0U1RRI6 287 aa11.45□□□□□ -0.58
PTPRA-201ENST00000216877 HLA-DMBP28068 263 aa11.45□□□□□ -0.58
PTPRA-201ENST00000216877 KLK5Q9Y337 293 aaPredicted RBP11.45□□□□□ -0.58
PTPRA-201ENST00000216877 PTPRQQ9UMZ3 2332 aa11.44□□□□□ -0.58
PTPRA-201ENST00000216877 TRGV3P03979 118 aa11.44□□□□□ -0.58
PTPRA-201ENST00000216877 CD59P13987 128 aa11.44□□□□□ -0.58
PTPRA-201ENST00000216877 DUX3Q96PT4 197 aa11.44□□□□□ -0.58
PTPRA-201ENST00000216877 PRO1854Q9UHT4 67 aa11.44□□□□□ -0.58
PTPRA-201ENST00000216877 LY6G6EA0A0G2JKS1 128 aa11.44□□□□□ -0.58
PTPRA-201ENST00000216877 IGHV3-23P01764 117 aa11.44□□□□□ -0.58
PTPRA-201ENST00000216877 ZNF80P51504 273 aaPredicted RBP11.44□□□□□ -0.58
PTPRA-201ENST00000216877 PIFOQ8TCI5 191 aa11.44□□□□□ -0.58
PTPRA-201ENST00000216877 U3KQA8 63 aa11.44□□□□□ -0.58
PTPRA-201ENST00000216877 IGHV3OR16-13A0A075B7E8 117 aa11.44□□□□□ -0.58
PTPRA-201ENST00000216877 IGHV3-74A0A0B4J1X5 117 aa11.44□□□□□ -0.58
PTPRA-201ENST00000216877 OOSP1A8MZH6 123 aa11.44□□□□□ -0.58
PTPRA-201ENST00000216877 MGPP08493 103 aa11.44□□□□□ -0.58
PTPRA-201ENST00000216877 CD7P09564 240 aa11.44□□□□□ -0.58
PTPRA-201ENST00000216877 CNTFRP26992 372 aa11.44□□□□□ -0.58
PTPRA-201ENST00000216877 SIGLEC15Q6ZMC9 328 aa11.44□□□□□ -0.58
PTPRA-201ENST00000216877 FDCSPQ8NFU4 85 aa11.44□□□□□ -0.58
PTPRA-201ENST00000216877 DOPEY2Q9Y3R5 2298 aa11.43□□□□□ -0.58
PTPRA-201ENST00000216877 ARHGAP32A7KAX9 2087 aa11.43□□□□□ -0.58
PTPRA-201ENST00000216877 FAM236AA0A1B0GUQ0 79 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms