RNA–Protein interactions for RNA: ENST00000216492.9

CHGA-201, Transcript of chromogranin A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHGA, Length 2,063 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-201ENST00000216492 CCDC140Q96MF4 163 aa13.04□□□□□ -0.32
CHGA-201ENST00000216492 ZNF580Q9UK33 172 aa13.04□□□□□ -0.32
CHGA-201ENST00000216492 SONP18583 2426 aaKnown RBP13.04□□□□□ -0.32
CHGA-201ENST00000216492 IGKV2-40A0A087WW87 121 aaPredicted RBP13.04□□□□□ -0.32
CHGA-201ENST00000216492 IGKV2D-40P01614 121 aaPredicted RBP13.04□□□□□ -0.32
CHGA-201ENST00000216492 TMEM95Q3KNT9 176 aa13.04□□□□□ -0.32
CHGA-201ENST00000216492 ZNF493Q6ZR52 646 aa13.04□□□□□ -0.32
CHGA-201ENST00000216492 MAP1LC3CQ9BXW4 147 aa13.04□□□□□ -0.32
CHGA-201ENST00000216492 NPFFR1Q9GZQ6 430 aa13.04□□□□□ -0.32
CHGA-201ENST00000216492 KLK15Q9H2R5 256 aa13.04□□□□□ -0.32
CHGA-201ENST00000216492 IGLV1-40P01703 118 aa13.03□□□□□ -0.32
CHGA-201ENST00000216492 PF4V1P10720 104 aa13.03□□□□□ -0.32
CHGA-201ENST00000216492 BMI1P35226 326 aa13.03□□□□□ -0.32
CHGA-201ENST00000216492 COTL1Q14019 142 aa13.03□□□□□ -0.32
CHGA-201ENST00000216492 PRR25Q96S07 402 aa13.03□□□□□ -0.32
CHGA-201ENST00000216492 IGHV3-35A0A0C4DH35 117 aa13.03□□□□□ -0.32
CHGA-201ENST00000216492 OR4C46A6NHA9 309 aa13.03□□□□□ -0.32
CHGA-201ENST00000216492 PRB4P10163 310 aaPredicted RBP13.03□□□□□ -0.32
CHGA-201ENST00000216492 CFHR3Q02985 330 aa13.03□□□□□ -0.32
CHGA-201ENST00000216492 MAJINQ3KP22 176 aa13.03□□□□□ -0.32
CHGA-201ENST00000216492 USMG5Q96IX5 58 aa13.03□□□□□ -0.32
CHGA-201ENST00000216492 TMEM191AQ9H0A3 160 aa13.03□□□□□ -0.32
CHGA-201ENST00000216492 MYO9AB2RTY4 2548 aa13.03□□□□□ -0.32
CHGA-201ENST00000216492 AP5S1Q9NUS5 200 aa13.02□□□□□ -0.33
CHGA-201ENST00000216492 LAMTOR2Q9Y2Q5 125 aa13.02□□□□□ -0.33
CHGA-201ENST00000216492 MRPS16Q9Y3D3 137 aaKnown RBP13.02□□□□□ -0.33
CHGA-201ENST00000216492 CSN3P07498 182 aa13.01□□□□□ -0.33
CHGA-201ENST00000216492 LYZL1Q6UWQ5 148 aa13.01□□□□□ -0.33
CHGA-201ENST00000216492 PET117Q6UWS5 81 aa13.01□□□□□ -0.33
CHGA-201ENST00000216492 FA2HQ7L5A8 372 aa13.01□□□□□ -0.33
CHGA-201ENST00000216492 TMEM86BQ8N661 226 aa13.01□□□□□ -0.33
CHGA-201ENST00000216492 ATP6V0BQ99437 205 aa13.01□□□□□ -0.33
CHGA-201ENST00000216492 SMAD5-AS1Q9Y6J3 95 aa13.01□□□□□ -0.33
CHGA-201ENST00000216492 TMSB15BA0A087X1C1 80 aa13.01□□□□□ -0.33
CHGA-201ENST00000216492 IGLL1P15814 213 aa13.01□□□□□ -0.33
CHGA-201ENST00000216492 TSPOP30536 169 aa13.01□□□□□ -0.33
CHGA-201ENST00000216492 PRSS3P2Q8NHM4 247 aa13.01□□□□□ -0.33
CHGA-201ENST00000216492 SMR3AQ99954 134 aa13.01□□□□□ -0.33
CHGA-201ENST00000216492 ZNF702PQ9H963 129 aa13.01□□□□□ -0.33
CHGA-201ENST00000216492 A0A087X0K7 114 aa13□□□□□ -0.33
CHGA-201ENST00000216492 HSBP1L1C9JCN9 74 aa13□□□□□ -0.33
CHGA-201ENST00000216492 ZNF138P52744 262 aa13□□□□□ -0.33
CHGA-201ENST00000216492 SPATA12Q7Z6I5 190 aa13□□□□□ -0.33
CHGA-201ENST00000216492 ST20Q9HBF5 79 aa13□□□□□ -0.33
CHGA-201ENST00000216492 A0A0G2JLM5 398 aa13□□□□□ -0.33
CHGA-201ENST00000216492 IGHG4P01861 327 aa13□□□□□ -0.33
CHGA-201ENST00000216492 LCNL1Q6ZST4 164 aa13□□□□□ -0.33
CHGA-201ENST00000216492 ZFAND3Q9H8U3 227 aa13□□□□□ -0.33
CHGA-201ENST00000216492 SRSF2Q01130 221 aaKnown RBP12.99□□□□□ -0.33
CHGA-201ENST00000216492 VGLL1Q99990 258 aa12.99□□□□□ -0.33
CHGA-201ENST00000216492 SLC50A1Q9BRV3 221 aa12.99□□□□□ -0.33
CHGA-201ENST00000216492 IGHV3-11P01762 117 aa12.98□□□□□ -0.33
CHGA-201ENST00000216492 PSMB8P28062 276 aa12.98□□□□□ -0.33
CHGA-201ENST00000216492 LINC00173Q6ZV60 143 aa12.98□□□□□ -0.33
CHGA-201ENST00000216492 OR10AG1Q8NH19 301 aa12.98□□□□□ -0.33
CHGA-201ENST00000216492 Q8TAT8 98 aa12.98□□□□□ -0.33
CHGA-201ENST00000216492 IGHV3OR16-8A0A075B7F1 116 aa12.98□□□□□ -0.33
CHGA-201ENST00000216492 BUB3O43684 328 aa12.98□□□□□ -0.33
CHGA-201ENST00000216492 FAM104BQ5XKR9 115 aa12.98□□□□□ -0.33
CHGA-201ENST00000216492 ORMDL3Q8N138 153 aa12.98□□□□□ -0.33
CHGA-201ENST00000216492 FER1L6-AS1Q8NA97 138 aa12.98□□□□□ -0.33
CHGA-201ENST00000216492 TMEM160Q9NX00 188 aa12.98□□□□□ -0.33
CHGA-201ENST00000216492 RBAKDNA6NC62 111 aa12.97□□□□□ -0.33
CHGA-201ENST00000216492 C10orf99Q6UWK7 81 aa12.97□□□□□ -0.33
CHGA-201ENST00000216492 U3KQK5 164 aa12.97□□□□□ -0.33
CHGA-201ENST00000216492 TMEM213A2RRL7 107 aa12.97□□□□□ -0.33
CHGA-201ENST00000216492 D6R8Y8 96 aa12.97□□□□□ -0.33
CHGA-201ENST00000216492 ARL3P36405 182 aa12.97□□□□□ -0.33
CHGA-201ENST00000216492 IGFL4Q6B9Z1 124 aa12.97□□□□□ -0.33
CHGA-201ENST00000216492 Q8N2B8 174 aa12.97□□□□□ -0.33
CHGA-201ENST00000216492 OR4X2Q8NGF9 303 aa12.97□□□□□ -0.33
CHGA-201ENST00000216492 TMEM89A2RUT3 159 aa12.96□□□□□ -0.33
CHGA-201ENST00000216492 DNAJC9-AS1A6NH13 148 aa12.96□□□□□ -0.33
CHGA-201ENST00000216492 SCGB2A2Q13296 93 aa12.96□□□□□ -0.33
CHGA-201ENST00000216492 PRELID3AQ96N28 172 aa12.96□□□□□ -0.33
CHGA-201ENST00000216492 METTL26Q96S19 204 aa12.96□□□□□ -0.33
CHGA-201ENST00000216492 FABP5P3A8MUU1 101 aa12.95□□□□□ -0.34
CHGA-201ENST00000216492 LY6G6DO95868 133 aa12.95□□□□□ -0.34
CHGA-201ENST00000216492 TRBV12-3P01733 135 aa12.95□□□□□ -0.34
CHGA-201ENST00000216492 HLA-DMBP28068 263 aa12.95□□□□□ -0.34
CHGA-201ENST00000216492 TWIST1Q15672 202 aa12.95□□□□□ -0.34
CHGA-201ENST00000216492 AMN1Q8IY45 258 aa12.95□□□□□ -0.34
CHGA-201ENST00000216492 TIMM8BQ9Y5J9 83 aaPredicted RBP12.95□□□□□ -0.34
CHGA-201ENST00000216492 ZNF80P51504 273 aaPredicted RBP12.95□□□□□ -0.34
CHGA-201ENST00000216492 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.95□□□□□ -0.34
CHGA-201ENST00000216492 ESM1Q9NQ30 184 aa12.95□□□□□ -0.34
CHGA-201ENST00000216492 ORM1P02763 201 aa12.94□□□□□ -0.34
CHGA-201ENST00000216492 IGLC6P0CF74 106 aa12.94□□□□□ -0.34
CHGA-201ENST00000216492 IFI27P40305 119 aaPredicted RBP12.94□□□□□ -0.34
CHGA-201ENST00000216492 H0Y8G0 127 aa12.93□□□□□ -0.34
CHGA-201ENST00000216492 SRD5A1P18405 259 aa12.93□□□□□ -0.34
CHGA-201ENST00000216492 TFPI2P48307 235 aa12.93□□□□□ -0.34
CHGA-201ENST00000216492 LINC01545Q5VT33 79 aa12.93□□□□□ -0.34
CHGA-201ENST00000216492 STPG4Q8N801 248 aa12.93□□□□□ -0.34
CHGA-201ENST00000216492 ZNF747Q9BV97 191 aa12.93□□□□□ -0.34
CHGA-201ENST00000216492 MS4A6AQ9H2W1 248 aa12.93□□□□□ -0.34
CHGA-201ENST00000216492 hDV102S1A0JD36 115 aa12.93□□□□□ -0.34
CHGA-201ENST00000216492 CLPSL1A2RUU4 121 aa12.93□□□□□ -0.34
CHGA-201ENST00000216492 ELANEP08246 267 aa12.93□□□□□ -0.34
CHGA-201ENST00000216492 MRPL51Q4U2R6 128 aaKnown RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms