RNA–Protein interactions for RNA: ENST00000216484.6

SPTLC2-201, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC2, Length 8,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-201ENST00000216484 A0A1B0GUS0 222 aa11.82□□□□□ -0.52
SPTLC2-201ENST00000216484 A0A1B0GW64 132 aa11.82□□□□□ -0.52
SPTLC2-201ENST00000216484 TEX22C9J3V5 150 aa11.82□□□□□ -0.52
SPTLC2-201ENST00000216484 SAA4P35542 130 aa11.82□□□□□ -0.52
SPTLC2-201ENST00000216484 IGHV1OR15-1A0A075B7D0 117 aa11.82□□□□□ -0.52
SPTLC2-201ENST00000216484 SDHAF1A6NFY7 115 aa11.82□□□□□ -0.52
SPTLC2-201ENST00000216484 COX7B2Q8TF08 81 aa11.82□□□□□ -0.52
SPTLC2-201ENST00000216484 MRPS18CQ9Y3D5 142 aaKnown RBP11.82□□□□□ -0.52
SPTLC2-201ENST00000216484 Q86TA4 180 aa11.82□□□□□ -0.52
SPTLC2-201ENST00000216484 FGF16O43320 207 aa11.82□□□□□ -0.52
SPTLC2-201ENST00000216484 IGKV4-1P06312 121 aa11.82□□□□□ -0.52
SPTLC2-201ENST00000216484 VSIG2Q96IQ7 327 aa11.82□□□□□ -0.52
SPTLC2-201ENST00000216484 COX8AP10176 69 aa11.81□□□□□ -0.52
SPTLC2-201ENST00000216484 LINC01356Q8N9X3 169 aa11.81□□□□□ -0.52
SPTLC2-201ENST00000216484 SEM1Q6ZVN7 128 aa11.81□□□□□ -0.52
SPTLC2-201ENST00000216484 IGHV4OR15-8A0A075B7B6 117 aa11.81□□□□□ -0.52
SPTLC2-201ENST00000216484 A0A087WW49 117 aa11.81□□□□□ -0.52
SPTLC2-201ENST00000216484 Q8N8P6 123 aa11.81□□□□□ -0.52
SPTLC2-201ENST00000216484 MRPL51Q4U2R6 128 aaKnown RBP11.81□□□□□ -0.52
SPTLC2-201ENST00000216484 FAM110DQ8TAY7 271 aaPredicted RBP11.81□□□□□ -0.52
SPTLC2-201ENST00000216484 PRSS46E5RG02 174 aa11.81□□□□□ -0.52
SPTLC2-201ENST00000216484 HS3ST6Q96QI5 342 aa11.81□□□□□ -0.52
SPTLC2-201ENST00000216484 E9PQ18 207 aa11.8□□□□□ -0.52
SPTLC2-201ENST00000216484 OVOL3O00110 214 aa11.8□□□□□ -0.52
SPTLC2-201ENST00000216484 AMTNQ6UX39 209 aa11.8□□□□□ -0.52
SPTLC2-201ENST00000216484 PFN1P07737 140 aaKnown RBP11.8□□□□□ -0.52
SPTLC2-201ENST00000216484 LY96Q9Y6Y9 160 aa11.8□□□□□ -0.52
SPTLC2-201ENST00000216484 J3KT08 172 aa11.8□□□□□ -0.52
SPTLC2-201ENST00000216484 K7ERS5 55 aa11.8□□□□□ -0.52
SPTLC2-201ENST00000216484 C9orf47Q6ZRZ4 202 aa11.8□□□□□ -0.52
SPTLC2-201ENST00000216484 KIAA1549LQ6ZVL6 1849 aa11.8□□□□□ -0.52
SPTLC2-201ENST00000216484 IGKV1D-8A0A087WSZ0 117 aa11.8□□□□□ -0.52
SPTLC2-201ENST00000216484 WIPF2Q8TF74 440 aaPredicted RBP11.8□□□□□ -0.52
SPTLC2-201ENST00000216484 FAM236AA0A1B0GUQ0 79 aa11.8□□□□□ -0.52
SPTLC2-201ENST00000216484 FAM236BA0A1B0GV22 79 aa11.8□□□□□ -0.52
SPTLC2-201ENST00000216484 FOXF2Q12947 444 aa11.8□□□□□ -0.52
SPTLC2-201ENST00000216484 EFNA2O43921 213 aa11.79□□□□□ -0.52
SPTLC2-201ENST00000216484 EFNA4P52798 201 aa11.79□□□□□ -0.52
SPTLC2-201ENST00000216484 IGKV1-9A0A0C4DH69 117 aa11.79□□□□□ -0.52
SPTLC2-201ENST00000216484 NREPQ16612 68 aa11.79□□□□□ -0.52
SPTLC2-201ENST00000216484 CASC2Q6XLA1 102 aa11.79□□□□□ -0.52
SPTLC2-201ENST00000216484 MRPL23Q16540 153 aaKnown RBP11.79□□□□□ -0.52
SPTLC2-201ENST00000216484 MPLKIPQ8TAP9 179 aa11.79□□□□□ -0.52
SPTLC2-201ENST00000216484 H0Y9J4 135 aa11.79□□□□□ -0.52
SPTLC2-201ENST00000216484 CDKN1BP46527 198 aa11.79□□□□□ -0.52
SPTLC2-201ENST00000216484 ANKRD39Q53RE8 183 aa11.79□□□□□ -0.52
SPTLC2-201ENST00000216484 LAIR2Q6ISS4 152 aa11.79□□□□□ -0.52
SPTLC2-201ENST00000216484 LINC01619G3V211 115 aa11.79□□□□□ -0.52
SPTLC2-201ENST00000216484 ATOX1O00244 68 aa11.79□□□□□ -0.52
SPTLC2-201ENST00000216484 J3QQQ9 107 aa11.78□□□□□ -0.52
SPTLC2-201ENST00000216484 HIGD2BQ4VC39 106 aa11.78□□□□□ -0.52
SPTLC2-201ENST00000216484 MRPL35Q9NZE8 188 aaKnown RBP11.78□□□□□ -0.52
SPTLC2-201ENST00000216484 LTBP4Q8N2S1 1624 aa11.78□□□□□ -0.52
SPTLC2-201ENST00000216484 F8VRH5 84 aa11.78□□□□□ -0.52
SPTLC2-201ENST00000216484 Q6ZQT7 251 aa11.78□□□□□ -0.52
SPTLC2-201ENST00000216484 MRPL55Q7Z7F7 128 aaKnown RBP11.78□□□□□ -0.52
SPTLC2-201ENST00000216484 TIRAPP58753 221 aa11.78□□□□□ -0.52
SPTLC2-201ENST00000216484 COL11A2P13942 1736 aaPredicted RBP11.78□□□□□ -0.52
SPTLC2-201ENST00000216484 ETV2O00321 342 aaPredicted RBP11.78□□□□□ -0.52
SPTLC2-201ENST00000216484 E9PLN8 166 aa11.78□□□□□ -0.52
SPTLC2-201ENST00000216484 NTN5Q8WTR8 489 aaPredicted RBP11.78□□□□□ -0.52
SPTLC2-201ENST00000216484 PKIGQ9Y2B9 76 aa11.78□□□□□ -0.52
SPTLC2-201ENST00000216484 FOXE3Q13461 319 aa11.78□□□□□ -0.52
SPTLC2-201ENST00000216484 C1orf53Q5VUE5 145 aa11.78□□□□□ -0.52
SPTLC2-201ENST00000216484 LINC00205P59089 165 aa11.77□□□□□ -0.52
SPTLC2-201ENST00000216484 C20orf204Q6ZNR8 217 aa11.77□□□□□ -0.52
SPTLC2-201ENST00000216484 SONP18583 2426 aaKnown RBP11.77□□□□□ -0.52
SPTLC2-201ENST00000216484 A0A087WV48 116 aa11.77□□□□□ -0.52
SPTLC2-201ENST00000216484 BRWD3Q6RI45 1802 aa11.77□□□□□ -0.52
SPTLC2-201ENST00000216484 C18orf32Q8TCD1 76 aa11.77□□□□□ -0.52
SPTLC2-201ENST00000216484 U3KQE9 123 aa11.77□□□□□ -0.53
SPTLC2-201ENST00000216484 ZFP2Q6ZN57 461 aa11.77□□□□□ -0.53
SPTLC2-201ENST00000216484 IGLL5B9A064 214 aa11.77□□□□□ -0.53
SPTLC2-201ENST00000216484 AHDC1Q5TGY3 1603 aaPredicted RBP11.77□□□□□ -0.53
SPTLC2-201ENST00000216484 COL24A1Q17RW2 1714 aa11.76□□□□□ -0.53
SPTLC2-201ENST00000216484 NRXN2Q9P2S2 1712 aa11.76□□□□□ -0.53
SPTLC2-201ENST00000216484 Q71RC1 249 aaPredicted RBP11.76□□□□□ -0.53
SPTLC2-201ENST00000216484 C8orf86Q6ZUL3 223 aa11.76□□□□□ -0.53
SPTLC2-201ENST00000216484 GLI3P10071 1580 aa11.76□□□□□ -0.53
SPTLC2-201ENST00000216484 OOSP1A8MZH6 123 aa11.76□□□□□ -0.53
SPTLC2-201ENST00000216484 FNDC10F2Z333 226 aa11.76□□□□□ -0.53
SPTLC2-201ENST00000216484 CSRP2Q16527 193 aa11.76□□□□□ -0.53
SPTLC2-201ENST00000216484 IGKV1-16P04430 117 aa11.75□□□□□ -0.53
SPTLC2-201ENST00000216484 ZNF134P52741 427 aa11.75□□□□□ -0.53
SPTLC2-201ENST00000216484 LINC00473A8K010 186 aa11.75□□□□□ -0.53
SPTLC2-201ENST00000216484 NOP10Q9NPE3 64 aaKnown RBP11.75□□□□□ -0.53
SPTLC2-201ENST00000216484 Q0VG73 95 aa11.75□□□□□ -0.53
SPTLC2-201ENST00000216484 C12orf74Q32Q52 190 aa11.75□□□□□ -0.53
SPTLC2-201ENST00000216484 Q9H8V8 135 aa11.75□□□□□ -0.53
SPTLC2-201ENST00000216484 A0A0J9YY99 117 aa11.75□□□□□ -0.53
SPTLC2-201ENST00000216484 UBE2AP49459 152 aa11.75□□□□□ -0.53
SPTLC2-201ENST00000216484 MLANAQ16655 118 aa11.75□□□□□ -0.53
SPTLC2-201ENST00000216484 RNF5Q99942 180 aa11.75□□□□□ -0.53
SPTLC2-201ENST00000216484 SRRM5B3KS81 715 aa11.75□□□□□ -0.53
SPTLC2-201ENST00000216484 SIGLEC8Q9NYZ4 499 aa11.75□□□□□ -0.53
SPTLC2-201ENST00000216484 RUSC1-AS1Q66K80 236 aa11.75□□□□□ -0.53
SPTLC2-201ENST00000216484 CD177Q8N6Q3 437 aa11.75□□□□□ -0.53
SPTLC2-201ENST00000216484 SHANK2-AS3Q9BTD1 123 aa11.75□□□□□ -0.53
SPTLC2-201ENST00000216484 PAQR4Q8N4S7 273 aaPredicted RBP11.74□□□□□ -0.53
SPTLC2-201ENST00000216484 WIPF3A6NGB9 483 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms