RNA–Protein interactions for RNA: ENST00000199706.12

MRPL28-201, Transcript of mitochondrial ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL28, Length 1,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-201ENST00000199706 GOLT1AQ6ZVE7 132 aa12.35□□□□□ -0.43
MRPL28-201ENST00000199706 MAP1LC3B2A6NCE7 125 aa12.34□□□□□ -0.43
MRPL28-201ENST00000199706 J3KRW8 73 aa12.34□□□□□ -0.43
MRPL28-201ENST00000199706 C1QBP02746 253 aa12.34□□□□□ -0.43
MRPL28-201ENST00000199706 HTN1P15515 57 aa12.34□□□□□ -0.43
MRPL28-201ENST00000199706 TMUB2Q71RG4 321 aa12.34□□□□□ -0.43
MRPL28-201ENST00000199706 C11orf72Q8NBR9 251 aa12.34□□□□□ -0.43
MRPL28-201ENST00000199706 TCEAL7Q9BRU2 100 aa12.34□□□□□ -0.43
MRPL28-201ENST00000199706 NDUFAF3Q9BU61 184 aa12.34□□□□□ -0.43
MRPL28-201ENST00000199706 ZNF471Q9BX82 626 aaPredicted RBP12.34□□□□□ -0.43
MRPL28-201ENST00000199706 MAP1LC3BQ9GZQ8 125 aa12.34□□□□□ -0.43
MRPL28-201ENST00000199706 VPS13DQ5THJ4 4388 aa12.34□□□□□ -0.43
MRPL28-201ENST00000199706 CBY3A6NI87 242 aa12.33□□□□□ -0.44
MRPL28-201ENST00000199706 SNURFLB1AK76 121 aa12.33□□□□□ -0.44
MRPL28-201ENST00000199706 PFDN1O60925 122 aa12.33□□□□□ -0.44
MRPL28-201ENST00000199706 TPT1P13693 172 aaKnown RBP12.33□□□□□ -0.44
MRPL28-201ENST00000199706 CYB561D1Q8N8Q1 229 aa12.33□□□□□ -0.44
MRPL28-201ENST00000199706 C18orf15Q96N68 181 aa12.33□□□□□ -0.44
MRPL28-201ENST00000199706 ATG101Q9BSB4 218 aa12.33□□□□□ -0.44
MRPL28-201ENST00000199706 IGHV1OR15-1A0A075B7D0 117 aa12.32□□□□□ -0.44
MRPL28-201ENST00000199706 FHITP49789 147 aa12.32□□□□□ -0.44
MRPL28-201ENST00000199706 TDRG1Q3Y452 100 aa12.32□□□□□ -0.44
MRPL28-201ENST00000199706 TMEM75Q8N9X5 138 aa12.32□□□□□ -0.44
MRPL28-201ENST00000199706 NOP10Q9NPE3 64 aaKnown RBP12.32□□□□□ -0.44
MRPL28-201ENST00000199706 EPDR1Q9UM22 224 aa12.32□□□□□ -0.44
MRPL28-201ENST00000199706 DNAH6Q9C0G6 4158 aa12.31□□□□□ -0.44
MRPL28-201ENST00000199706 RGS13O14921 159 aa12.31□□□□□ -0.44
MRPL28-201ENST00000199706 LY6G6CO95867 125 aa12.31□□□□□ -0.44
MRPL28-201ENST00000199706 ATP5G1P05496 136 aa12.31□□□□□ -0.44
MRPL28-201ENST00000199706 ATP5G3P48201 142 aa12.31□□□□□ -0.44
MRPL28-201ENST00000199706 TCL1AP56279 114 aa12.31□□□□□ -0.44
MRPL28-201ENST00000199706 SUMO1P63165 101 aaKnown RBP12.31□□□□□ -0.44
MRPL28-201ENST00000199706 GNG5P63218 68 aa12.31□□□□□ -0.44
MRPL28-201ENST00000199706 EIF5AL1Q6IS14 154 aaKnown RBP12.31□□□□□ -0.44
MRPL28-201ENST00000199706 MBD3L1Q8WWY6 194 aa12.31□□□□□ -0.44
MRPL28-201ENST00000199706 NDFIP1Q9BT67 221 aa12.31□□□□□ -0.44
MRPL28-201ENST00000199706 TP53TG3Q9ULZ0 132 aa12.31□□□□□ -0.44
MRPL28-201ENST00000199706 FAM74A7A6NL05 159 aa12.3□□□□□ -0.44
MRPL28-201ENST00000199706 DEFB130BP0DP73 79 aa12.3□□□□□ -0.44
MRPL28-201ENST00000199706 DEFB130AP0DP74 79 aa12.3□□□□□ -0.44
MRPL28-201ENST00000199706 LGALSLQ3ZCW2 172 aaPredicted RBP12.3□□□□□ -0.44
MRPL28-201ENST00000199706 AKAP14Q86UN6 197 aa12.3□□□□□ -0.44
MRPL28-201ENST00000199706 IQCF2Q8IXL9 164 aa12.3□□□□□ -0.44
MRPL28-201ENST00000199706 HIST1H2BAQ96A08 127 aa12.3□□□□□ -0.44
MRPL28-201ENST00000199706 TREM1Q9NP99 234 aa12.3□□□□□ -0.44
MRPL28-201ENST00000199706 PLA2G2EQ9NZK7 142 aa12.3□□□□□ -0.44
MRPL28-201ENST00000199706 RPH3ALQ9UNE2 315 aa12.3□□□□□ -0.44
MRPL28-201ENST00000199706 KMT2AQ03164 3969 aa12.29□□□□□ -0.44
MRPL28-201ENST00000199706 TRAV8-1A0A0A6YYK1 113 aa12.29□□□□□ -0.44
MRPL28-201ENST00000199706 TRAV21A0A0B4J279 112 aa12.29□□□□□ -0.44
MRPL28-201ENST00000199706 IGLV2-11P01706 119 aa12.29□□□□□ -0.44
MRPL28-201ENST00000199706 RAB5CP51148 216 aa12.29□□□□□ -0.44
MRPL28-201ENST00000199706 LGALS9BQ3B8N2 356 aa12.29□□□□□ -0.44
MRPL28-201ENST00000199706 C15orf53Q8NAA6 179 aa12.29□□□□□ -0.44
MRPL28-201ENST00000199706 P0DMU3 169 aa12.28□□□□□ -0.44
MRPL28-201ENST00000199706 FAM231AP0DMU4 169 aa12.28□□□□□ -0.44
MRPL28-201ENST00000199706 FAM231CP0DMU5 169 aa12.28□□□□□ -0.44
MRPL28-201ENST00000199706 FGF8P55075 233 aaPredicted RBP12.28□□□□□ -0.44
MRPL28-201ENST00000199706 FLI1Q01543 452 aaPredicted RBP12.28□□□□□ -0.44
MRPL28-201ENST00000199706 SAPCD1Q5SSQ6 148 aa12.28□□□□□ -0.44
MRPL28-201ENST00000199706 TVP23CQ96ET8 276 aa12.28□□□□□ -0.44
MRPL28-201ENST00000199706 TMPRSS5Q9H3S3 457 aa12.28□□□□□ -0.44
MRPL28-201ENST00000199706 GSN-AS1Q9NRJ2 163 aa12.28□□□□□ -0.44
MRPL28-201ENST00000199706 TRGV11A0A075B6L2 103 aa12.27□□□□□ -0.45
MRPL28-201ENST00000199706 SPINK4O60575 86 aa12.27□□□□□ -0.45
MRPL28-201ENST00000199706 PPT1P50897 306 aa12.27□□□□□ -0.45
MRPL28-201ENST00000199706 ZNF415Q09FC8 603 aa12.27□□□□□ -0.45
MRPL28-201ENST00000199706 FAM159AQ6UWV7 190 aa12.27□□□□□ -0.45
MRPL28-201ENST00000199706 FAM213BQ8TBF2 198 aa12.27□□□□□ -0.45
MRPL28-201ENST00000199706 PSG8Q9UQ74 426 aa12.27□□□□□ -0.45
MRPL28-201ENST00000199706 KLF12Q9Y4X4 402 aa12.27□□□□□ -0.45
MRPL28-201ENST00000199706 MUC4Q99102 2169 aa12.27□□□□□ -0.45
MRPL28-201ENST00000199706 TRAV1-1A0A0B4J248 108 aa12.26□□□□□ -0.45
MRPL28-201ENST00000199706 PEX7O00628 323 aa12.26□□□□□ -0.45
MRPL28-201ENST00000199706 IFNA7P01567 189 aa12.26□□□□□ -0.45
MRPL28-201ENST00000199706 HTN3P15516 51 aa12.26□□□□□ -0.45
MRPL28-201ENST00000199706 ZFP69Q49AA0 526 aa12.26□□□□□ -0.45
MRPL28-201ENST00000199706 TMEM88Q6PEY1 159 aa12.26□□□□□ -0.45
MRPL28-201ENST00000199706 SLC51BQ86UW2 128 aa12.26□□□□□ -0.45
MRPL28-201ENST00000199706 KCNS1Q96KK3 526 aa12.26□□□□□ -0.45
MRPL28-201ENST00000199706 F6UZH7 168 aa12.25□□□□□ -0.45
MRPL28-201ENST00000199706 H3BNG1 76 aa12.25□□□□□ -0.45
MRPL28-201ENST00000199706 UBE2G2P60604 165 aa12.25□□□□□ -0.45
MRPL28-201ENST00000199706 Q6ZQT7 251 aa12.25□□□□□ -0.45
MRPL28-201ENST00000199706 Q6ZTI0 123 aa12.25□□□□□ -0.45
MRPL28-201ENST00000199706 COX8CQ7Z4L0 72 aa12.25□□□□□ -0.45
MRPL28-201ENST00000199706 SFT2D1Q8WV19 159 aa12.25□□□□□ -0.45
MRPL28-201ENST00000199706 TRBV6-1A0A0K0K1D8 114 aa12.24□□□□□ -0.45
MRPL28-201ENST00000199706 F5H768 121 aa12.24□□□□□ -0.45
MRPL28-201ENST00000199706 PFN1P07737 140 aaKnown RBP12.24□□□□□ -0.45
MRPL28-201ENST00000199706 H2AFB1P0C5Y9 115 aa12.24□□□□□ -0.45
MRPL28-201ENST00000199706 SMUG1Q53HV7 270 aa12.24□□□□□ -0.45
MRPL28-201ENST00000199706 SPXQ9BT56 116 aa12.24□□□□□ -0.45
MRPL28-201ENST00000199706 GAGE12BA1L429 117 aa12.23□□□□□ -0.45
MRPL28-201ENST00000199706 GAGE7O76087 117 aa12.23□□□□□ -0.45
MRPL28-201ENST00000199706 GAGE12FP0CL80 117 aa12.23□□□□□ -0.45
MRPL28-201ENST00000199706 GAGE12GP0CL81 117 aa12.23□□□□□ -0.45
MRPL28-201ENST00000199706 GAGE12IP0CL82 117 aa12.23□□□□□ -0.45
MRPL28-201ENST00000199706 RNF212Q495C1 297 aa12.23□□□□□ -0.45
MRPL28-201ENST00000199706 Q86TA4 180 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms