RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 Adamts17E9Q4D1 1122 aa10.28□□□□□ -0.76
Trim56-201ENSMUST00000054384 TbpP29037 316 aa10.28□□□□□ -0.76
Trim56-201ENSMUST00000054384 Mesp1P97309 243 aa10.28□□□□□ -0.76
Trim56-201ENSMUST00000054384 RprmlQ3URD2 117 aa10.28□□□□□ -0.76
Trim56-201ENSMUST00000054384 Khdc1cQ4KL78 166 aa10.28□□□□□ -0.76
Trim56-201ENSMUST00000054384 Dppa1Q810Y7 116 aa10.28□□□□□ -0.76
Trim56-201ENSMUST00000054384 Rnf182Q8C432 247 aa10.28□□□□□ -0.76
Trim56-201ENSMUST00000054384 Klk10Q99M20 278 aa10.27□□□□□ -0.76
Trim56-201ENSMUST00000054384 Cnn3Q9DAW9 330 aaKnown RBP10.27□□□□□ -0.76
Trim56-201ENSMUST00000054384 Gm20873J3QMQ9 232 aa10.27□□□□□ -0.76
Trim56-201ENSMUST00000054384 Olfr905L7N1X5 310 aa10.27□□□□□ -0.76
Trim56-201ENSMUST00000054384 Cd5P13379 494 aa10.27□□□□□ -0.76
Trim56-201ENSMUST00000054384 Cd81P35762 236 aa10.27□□□□□ -0.76
Trim56-201ENSMUST00000054384 Zfp974Q3UVF6 752 aa10.27□□□□□ -0.76
Trim56-201ENSMUST00000054384 Megf10Q6DIB5 1147 aa10.27□□□□□ -0.76
Trim56-201ENSMUST00000054384 2900055J20RikQ9D6G3 140 aa10.27□□□□□ -0.76
Trim56-201ENSMUST00000054384 Tnfrsf13cQ9D8D0 175 aa10.27□□□□□ -0.76
Trim56-201ENSMUST00000054384 Rnd2Q9QYM5 227 aa10.27□□□□□ -0.76
Trim56-201ENSMUST00000054384 PkdrejQ9Z0T6 2126 aa10.27□□□□□ -0.77
Trim56-201ENSMUST00000054384 D830044I16RikA0A1D5RM53 117 aa10.27□□□□□ -0.77
Trim56-201ENSMUST00000054384 NgfP01139 241 aa10.27□□□□□ -0.77
Trim56-201ENSMUST00000054384 P01664 111 aa10.27□□□□□ -0.77
Trim56-201ENSMUST00000054384 Gm14214V9GX35 225 aa10.27□□□□□ -0.77
Trim56-201ENSMUST00000054384 Slc17a3G3UWD9 498 aa10.27□□□□□ -0.77
Trim56-201ENSMUST00000054384 Ankrd66J3QNN4 192 aa10.27□□□□□ -0.77
Trim56-201ENSMUST00000054384 Saa2P05367 122 aa10.27□□□□□ -0.77
Trim56-201ENSMUST00000054384 Defa2P28309 93 aa10.27□□□□□ -0.77
Trim56-201ENSMUST00000054384 Defa4P28311 92 aa10.27□□□□□ -0.77
Trim56-201ENSMUST00000054384 Zfp936Q3ULA8 456 aa10.27□□□□□ -0.77
Trim56-201ENSMUST00000054384 Apobec4Q497M3 374 aa10.27□□□□□ -0.77
Trim56-201ENSMUST00000054384 Olfr399Q7TRX3 311 aa10.27□□□□□ -0.77
Trim56-201ENSMUST00000054384 Dph3Q8K0W9 82 aa10.27□□□□□ -0.77
Trim56-201ENSMUST00000054384 Q8VCE4 163 aa10.27□□□□□ -0.77
Trim56-201ENSMUST00000054384 Olfr958Q8VEY3 312 aa10.27□□□□□ -0.77
Trim56-201ENSMUST00000054384 Olfr1012Q8VFJ7 311 aa10.27□□□□□ -0.77
Trim56-201ENSMUST00000054384 V1ra8Q9EQ48 279 aa10.27□□□□□ -0.77
Trim56-201ENSMUST00000054384 Pla2g2fQ9QZT4 168 aa10.27□□□□□ -0.77
Trim56-201ENSMUST00000054384 Col11a1Q61245 1804 aa10.27□□□□□ -0.77
Trim56-201ENSMUST00000054384 Obp2bA2BHR0 176 aa10.27□□□□□ -0.77
Trim56-201ENSMUST00000054384 Tlcd2Q8VC26 310 aa10.27□□□□□ -0.77
Trim56-201ENSMUST00000054384 Trem3Q9JKE1 183 aa10.27□□□□□ -0.77
Trim56-201ENSMUST00000054384 Hoxb3P09026 433 aa10.27□□□□□ -0.77
Trim56-201ENSMUST00000054384 Defa1P11477 93 aa10.27□□□□□ -0.77
Trim56-201ENSMUST00000054384 Ly6fP35460 134 aa10.27□□□□□ -0.77
Trim56-201ENSMUST00000054384 Pf4Q9Z126 105 aa10.27□□□□□ -0.77
Trim56-201ENSMUST00000054384 Gm39566A0A1B0GT45 1251 aa10.26□□□□□ -0.77
Trim56-201ENSMUST00000054384 Olfr92L7N475 312 aa10.26□□□□□ -0.77
Trim56-201ENSMUST00000054384 P03976 113 aa10.26□□□□□ -0.77
Trim56-201ENSMUST00000054384 Znf385aQ8VD12 386 aaKnown RBP10.26□□□□□ -0.77
Trim56-201ENSMUST00000054384 Olfr498Q8VEW2 330 aa10.26□□□□□ -0.77
Trim56-201ENSMUST00000054384 Tspan13Q9D8C2 204 aa10.26□□□□□ -0.77
Trim56-201ENSMUST00000054384 Scgb1b11A0A087WQJ0 93 aa10.26□□□□□ -0.77
Trim56-201ENSMUST00000054384 Rag2P21784 527 aa10.26□□□□□ -0.77
Trim56-201ENSMUST00000054384 Defb8Q91V82 60 aa10.26□□□□□ -0.77
Trim56-201ENSMUST00000054384 Gm44501A8R0T9 150 aa10.26□□□□□ -0.77
Trim56-201ENSMUST00000054384 P01801 115 aa10.26□□□□□ -0.77
Trim56-201ENSMUST00000054384 Zfp2P08043 459 aa10.26□□□□□ -0.77
Trim56-201ENSMUST00000054384 Fcrl1Q8R4Y0 343 aa10.26□□□□□ -0.77
Trim56-201ENSMUST00000054384 Olfr593Q8VF28 327 aa10.26□□□□□ -0.77
Trim56-201ENSMUST00000054384 Tnfrsf12aQ9CR75 129 aa10.26□□□□□ -0.77
Trim56-201ENSMUST00000054384 Tex38A2A8T7 201 aa10.26□□□□□ -0.77
Trim56-201ENSMUST00000054384 Fam53aE9PV82 402 aa10.26□□□□□ -0.77
Trim56-201ENSMUST00000054384 Olfr235E9Q9Z6 312 aa10.26□□□□□ -0.77
Trim56-201ENSMUST00000054384 TgfaP48030 159 aa10.26□□□□□ -0.77
Trim56-201ENSMUST00000054384 Xaf1Q5NBU8 273 aa10.26□□□□□ -0.77
Trim56-201ENSMUST00000054384 Wbp1lQ8BGW2 348 aa10.26□□□□□ -0.77
Trim56-201ENSMUST00000054384 Gm10118Q8C8J5 116 aa10.26□□□□□ -0.77
Trim56-201ENSMUST00000054384 Psmg3Q9CZH3 122 aa10.26□□□□□ -0.77
Trim56-201ENSMUST00000054384 Hamp2Q80T19 83 aa10.26□□□□□ -0.77
Trim56-201ENSMUST00000054384 Cma2Q91VB1 246 aa10.26□□□□□ -0.77
Trim56-201ENSMUST00000054384 Dda1Q9D9Z5 102 aa10.26□□□□□ -0.77
Trim56-201ENSMUST00000054384 A6H6Q4 206 aa10.26□□□□□ -0.77
Trim56-201ENSMUST00000054384 1700015F17RikD3YUK8 150 aa10.26□□□□□ -0.77
Trim56-201ENSMUST00000054384 Negr1Q80Z24 348 aa10.26□□□□□ -0.77
Trim56-201ENSMUST00000054384 Gpr179E9PY61 2293 aa10.26□□□□□ -0.77
Trim56-201ENSMUST00000054384 Adamtsl3G3UXC7 1706 aa10.26□□□□□ -0.77
Trim56-201ENSMUST00000054384 Trbv17A0A140T8P8 114 aa10.26□□□□□ -0.77
Trim56-201ENSMUST00000054384 Gm614Q3V2K1 191 aa10.26□□□□□ -0.77
Trim56-201ENSMUST00000054384 Gm6594J3QM43 95 aa10.26□□□□□ -0.77
Trim56-201ENSMUST00000054384 Olfr875Q7TRE5 310 aa10.26□□□□□ -0.77
Trim56-201ENSMUST00000054384 Gm5111Q8C9M4 190 aa10.26□□□□□ -0.77
Trim56-201ENSMUST00000054384 Parp4E9PYK3 1969 aa10.25□□□□□ -0.77
Trim56-201ENSMUST00000054384 Gm9920D3YVZ2 140 aa10.25□□□□□ -0.77
Trim56-201ENSMUST00000054384 Cxcl1P12850 96 aa10.25□□□□□ -0.77
Trim56-201ENSMUST00000054384 BC106179Q8C9L1 186 aa10.25□□□□□ -0.77
Trim56-201ENSMUST00000054384 Dnase2bQ9QY48 354 aa10.25□□□□□ -0.77
Trim56-201ENSMUST00000054384 Slurp1Q9Z0K7 110 aa10.25□□□□□ -0.77
Trim56-201ENSMUST00000054384 TracA0A075B662 137 aa10.25□□□□□ -0.77
Trim56-201ENSMUST00000054384 Foxr2Q3UM89 302 aa10.25□□□□□ -0.77
Trim56-201ENSMUST00000054384 Vkorc1l1Q6TEK5 176 aa10.25□□□□□ -0.77
Trim56-201ENSMUST00000054384 C1saQ8CG14 688 aa10.25□□□□□ -0.77
Trim56-201ENSMUST00000054384 Phf7Q9DAG9 307 aa10.25□□□□□ -0.77
Trim56-201ENSMUST00000054384 Gm45783A0A1B0GT48 74 aa10.25□□□□□ -0.77
Trim56-201ENSMUST00000054384 Gm10130F6ZHM5 101 aa10.25□□□□□ -0.77
Trim56-201ENSMUST00000054384 Cdkn1bP46414 197 aa10.25□□□□□ -0.77
Trim56-201ENSMUST00000054384 Bsph1Q3UW26 133 aa10.25□□□□□ -0.77
Trim56-201ENSMUST00000054384 Prss44Q402U7 372 aa10.25□□□□□ -0.77
Trim56-201ENSMUST00000054384 Vsig8Q6P3A4 417 aa10.25□□□□□ -0.77
Trim56-201ENSMUST00000054384 Spsb4Q8R5B6 273 aa10.25□□□□□ -0.77
Trim56-201ENSMUST00000054384 AY761184Q9D848 116 aa10.25□□□□□ -0.77
Retrieved 100 of 22,080 RNA–protein pairs in 85.9 ms