RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 DIRC3C9JPN6 131 aa6.96□□□□□ -1.3
PHGDH-228ENST00000641847 PDE6DO43924 150 aa6.96□□□□□ -1.3
PHGDH-228ENST00000641847 IGKV2D-40P01614 121 aaPredicted RBP6.96□□□□□ -1.3
PHGDH-228ENST00000641847 TCRAP04437 139 aa6.96□□□□□ -1.3
PHGDH-228ENST00000641847 CD7P09564 240 aa6.96□□□□□ -1.3
PHGDH-228ENST00000641847 DEFB131AP59861 70 aa6.96□□□□□ -1.3
PHGDH-228ENST00000641847 DEFB1P60022 68 aa6.96□□□□□ -1.3
PHGDH-228ENST00000641847 HIST1H2BAQ96A08 127 aa6.96□□□□□ -1.3
PHGDH-228ENST00000641847 C11orf52Q96A22 123 aa6.96□□□□□ -1.3
PHGDH-228ENST00000641847 SPATA25Q9BR10 227 aa6.96□□□□□ -1.3
PHGDH-228ENST00000641847 ATG101Q9BSB4 218 aa6.96□□□□□ -1.3
PHGDH-228ENST00000641847 TREM1Q9NP99 234 aa6.96□□□□□ -1.3
PHGDH-228ENST00000641847 SORL1Q92673 2214 aa6.96□□□□□ -1.3
PHGDH-228ENST00000641847 OR11H12B2RN74 326 aa6.95□□□□□ -1.3
PHGDH-228ENST00000641847 C9JQL5 133 aa6.95□□□□□ -1.3
PHGDH-228ENST00000641847 F6UB75 175 aa6.95□□□□□ -1.3
PHGDH-228ENST00000641847 AKR1C3P42330 323 aa6.95□□□□□ -1.3
PHGDH-228ENST00000641847 CEBPGP53567 150 aa6.95□□□□□ -1.3
PHGDH-228ENST00000641847 GOLT1AQ6ZVE7 132 aa6.95□□□□□ -1.3
PHGDH-228ENST00000641847 GTSCR1Q86UQ5 136 aa6.95□□□□□ -1.3
PHGDH-228ENST00000641847 APRG1Q8IVJ8 170 aa6.95□□□□□ -1.3
PHGDH-228ENST00000641847 CYB561D1Q8N8Q1 229 aa6.95□□□□□ -1.3
PHGDH-228ENST00000641847 WFDC10AQ9H1F0 79 aa6.95□□□□□ -1.3
PHGDH-228ENST00000641847 SMDT1Q9H4I9 107 aa6.95□□□□□ -1.3
PHGDH-228ENST00000641847 SERTM2A0A1B0GWG4 89 aa6.94□□□□□ -1.3
PHGDH-228ENST00000641847 A6NJY4 79 aa6.94□□□□□ -1.3
PHGDH-228ENST00000641847 KNCNA6PVL3 124 aa6.94□□□□□ -1.3
PHGDH-228ENST00000641847 TMEM250H0YL14 139 aa6.94□□□□□ -1.3
PHGDH-228ENST00000641847 SRP19P09132 144 aaKnown RBP6.94□□□□□ -1.3
PHGDH-228ENST00000641847 ZNF705DP0CH99 300 aaPredicted RBP6.94□□□□□ -1.3
PHGDH-228ENST00000641847 ZNF705BP0CI00 300 aaPredicted RBP6.94□□□□□ -1.3
PHGDH-228ENST00000641847 CNN1P51911 297 aaKnown RBP6.94□□□□□ -1.3
PHGDH-228ENST00000641847 CMC4P56277 68 aaPredicted RBP6.94□□□□□ -1.3
PHGDH-228ENST00000641847 HIST1H1AQ02539 215 aaPredicted RBP6.94□□□□□ -1.3
PHGDH-228ENST00000641847 ZNF124Q15973 351 aa6.94□□□□□ -1.3
PHGDH-228ENST00000641847 GDF5OSQ5U4N7 250 aa6.94□□□□□ -1.3
PHGDH-228ENST00000641847 UQCC3Q6UW78 93 aa6.94□□□□□ -1.3
PHGDH-228ENST00000641847 FOXI2Q6ZQN5 318 aa6.94□□□□□ -1.3
PHGDH-228ENST00000641847 ARL6IP6Q8N6S5 226 aa6.94□□□□□ -1.3
PHGDH-228ENST00000641847 TMEM75Q8N9X5 138 aa6.94□□□□□ -1.3
PHGDH-228ENST00000641847 OR8A1Q8NGG7 326 aa6.94□□□□□ -1.3
PHGDH-228ENST00000641847 OR10J6PQ8NGY7 276 aa6.94□□□□□ -1.3
PHGDH-228ENST00000641847 VGLL1Q99990 258 aa6.94□□□□□ -1.3
PHGDH-228ENST00000641847 DERL1Q9BUN8 251 aa6.94□□□□□ -1.3
PHGDH-228ENST00000641847 SAV1Q9H4B6 383 aaPredicted RBP6.94□□□□□ -1.3
PHGDH-228ENST00000641847 C19orf73Q9NVV2 129 aa6.94□□□□□ -1.3
PHGDH-228ENST00000641847 KIAA1109Q2LD37 5005 aa6.93□□□□□ -1.3
PHGDH-228ENST00000641847 TRAV8-1A0A0A6YYK1 113 aa6.93□□□□□ -1.3
PHGDH-228ENST00000641847 TRAV34A0A0B4J273 112 aa6.93□□□□□ -1.3
PHGDH-228ENST00000641847 A0A0J9YX75 114 aa6.93□□□□□ -1.3
PHGDH-228ENST00000641847 RBAKDNA6NC62 111 aa6.93□□□□□ -1.3
PHGDH-228ENST00000641847 NPIPB6E9PJ23 425 aa6.93□□□□□ -1.3
PHGDH-228ENST00000641847 K7EQM0 130 aa6.93□□□□□ -1.3
PHGDH-228ENST00000641847 NDUFS6O75380 124 aaKnown RBP6.93□□□□□ -1.3
PHGDH-228ENST00000641847 SFTA3P0C7M3 94 aa6.93□□□□□ -1.3
PHGDH-228ENST00000641847 UBE2G1P62253 170 aa6.93□□□□□ -1.3
PHGDH-228ENST00000641847 ERCC8Q13216 396 aa6.93□□□□□ -1.3
PHGDH-228ENST00000641847 NDUFA5Q16718 116 aa6.93□□□□□ -1.3
PHGDH-228ENST00000641847 ACTL10Q5JWF8 245 aa6.93□□□□□ -1.3
PHGDH-228ENST00000641847 EBLN2Q6P2I7 272 aa6.93□□□□□ -1.3
PHGDH-228ENST00000641847 Q86TA4 180 aa6.93□□□□□ -1.3
PHGDH-228ENST00000641847 EIF4E3Q8N5X7 224 aaKnown RBP6.93□□□□□ -1.3
PHGDH-228ENST00000641847 Q8TAT8 98 aa6.93□□□□□ -1.3
PHGDH-228ENST00000641847 C2CD4CQ8TF44 421 aa6.93□□□□□ -1.3
PHGDH-228ENST00000641847 LINC00479Q96M42 142 aa6.93□□□□□ -1.3
PHGDH-228ENST00000641847 FAM110AQ9BQ89 295 aa6.93□□□□□ -1.3
PHGDH-228ENST00000641847 SLC35B3Q9H1N7 401 aa6.93□□□□□ -1.3
PHGDH-228ENST00000641847 LY6G6CO95867 125 aa6.92□□□□□ -1.3
PHGDH-228ENST00000641847 IGKV3-20P01619 116 aa6.92□□□□□ -1.3
PHGDH-228ENST00000641847 HLA-DRB4P13762 266 aa6.92□□□□□ -1.3
PHGDH-228ENST00000641847 RPL35P42766 123 aaKnown RBP6.92□□□□□ -1.3
PHGDH-228ENST00000641847 TMEM183BQ1AE95 376 aa6.92□□□□□ -1.3
PHGDH-228ENST00000641847 ZNF674Q2M3X9 581 aa6.92□□□□□ -1.3
PHGDH-228ENST00000641847 TMEM78Q5T7P6 136 aa6.92□□□□□ -1.3
PHGDH-228ENST00000641847 C9orf47Q6ZRZ4 202 aa6.92□□□□□ -1.3
PHGDH-228ENST00000641847 PRNTQ86SH4 94 aa6.92□□□□□ -1.3
PHGDH-228ENST00000641847 DEFB125Q8N687 156 aa6.92□□□□□ -1.3
PHGDH-228ENST00000641847 FMC1Q96HJ9 113 aa6.92□□□□□ -1.3
PHGDH-228ENST00000641847 SGK494Q96LW2 274 aa6.92□□□□□ -1.3
PHGDH-228ENST00000641847 PARLQ9H300 379 aa6.92□□□□□ -1.3
PHGDH-228ENST00000641847 PSG8Q9UQ74 426 aa6.92□□□□□ -1.3
PHGDH-228ENST00000641847 HLA-DRB4X5D2U9 266 aa6.92□□□□□ -1.3
PHGDH-228ENST00000641847 KMT2AQ03164 3969 aa6.92□□□□□ -1.3
PHGDH-228ENST00000641847 FBLL1A6NHQ2 334 aaKnown RBP6.91□□□□□ -1.3
PHGDH-228ENST00000641847 H3BMM0 161 aa6.91□□□□□ -1.3
PHGDH-228ENST00000641847 DUSP14O95147 198 aaKnown RBP6.91□□□□□ -1.3
PHGDH-228ENST00000641847 IGLV2-11P01706 119 aa6.91□□□□□ -1.3
PHGDH-228ENST00000641847 S100A9P06702 114 aaKnown RBP6.91□□□□□ -1.3
PHGDH-228ENST00000641847 FLI1Q01543 452 aaPredicted RBP6.91□□□□□ -1.3
PHGDH-228ENST00000641847 CENPWQ5EE01 88 aa6.91□□□□□ -1.3
PHGDH-228ENST00000641847 STHQ8IWL8 128 aa6.91□□□□□ -1.3
PHGDH-228ENST00000641847 SLC7A5P1Q8MH63 180 aa6.91□□□□□ -1.3
PHGDH-228ENST00000641847 OR4B1Q8NGF8 309 aa6.91□□□□□ -1.3
PHGDH-228ENST00000641847 LINC00476Q8WZB0 136 aa6.91□□□□□ -1.3
PHGDH-228ENST00000641847 IGF2BP2-AS1Q96M15 143 aa6.91□□□□□ -1.3
PHGDH-228ENST00000641847 AGPAT4-IT1Q9H0P7 198 aa6.91□□□□□ -1.3
PHGDH-228ENST00000641847 KLF12Q9Y4X4 402 aa6.91□□□□□ -1.3
PHGDH-228ENST00000641847 TRBV6-1A0A0K0K1D8 114 aa6.9□□□□□ -1.3
PHGDH-228ENST00000641847 ZNF727A8MUV8 499 aa6.9□□□□□ -1.3
PHGDH-228ENST00000641847 CT45A10P0DMU9 189 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 123.7 ms