RNA–Protein interactions for RNA: ENST00000641375.1

PHGDH-216, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,196 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-216ENST00000641375 RPL19P84098 196 aaKnown RBP12.59□□□□□ -0.39
PHGDH-216ENST00000641375 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.59□□□□□ -0.39
PHGDH-216ENST00000641375 MYOZ3Q8TDC0 251 aa12.59□□□□□ -0.39
PHGDH-216ENST00000641375 PSG8Q9UQ74 426 aa12.59□□□□□ -0.39
PHGDH-216ENST00000641375 GPHB5Q86YW7 130 aa12.59□□□□□ -0.39
PHGDH-216ENST00000641375 NUDT10Q8NFP7 164 aa12.59□□□□□ -0.39
PHGDH-216ENST00000641375 GLMPQ8WWB7 406 aa12.59□□□□□ -0.39
PHGDH-216ENST00000641375 NUDT11Q96G61 164 aa12.59□□□□□ -0.39
PHGDH-216ENST00000641375 UBE2E2Q96LR5 201 aa12.59□□□□□ -0.39
PHGDH-216ENST00000641375 DAZ1Q9NQZ3 744 aaKnown RBP12.59□□□□□ -0.39
PHGDH-216ENST00000641375 ZNF492Q9P255 531 aa12.59□□□□□ -0.39
PHGDH-216ENST00000641375 SONP18583 2426 aaKnown RBP12.58□□□□□ -0.4
PHGDH-216ENST00000641375 RNASE8Q8TDE3 154 aaKnown RBP12.58□□□□□ -0.4
PHGDH-216ENST00000641375 CLEC5AQ9NY25 188 aa12.58□□□□□ -0.4
PHGDH-216ENST00000641375 DNAJC9-AS1A6NH13 148 aa12.57□□□□□ -0.4
PHGDH-216ENST00000641375 K7EMT4 169 aa12.57□□□□□ -0.4
PHGDH-216ENST00000641375 CHEK1O14757 476 aa12.57□□□□□ -0.4
PHGDH-216ENST00000641375 DAZAP1Q96EP5 407 aaKnown RBP12.57□□□□□ -0.4
PHGDH-216ENST00000641375 TMEM160Q9NX00 188 aa12.57□□□□□ -0.4
PHGDH-216ENST00000641375 SMIM27A0A1W2PRY6 76 aa12.57□□□□□ -0.4
PHGDH-216ENST00000641375 LGALS1P09382 135 aaKnown RBP12.57□□□□□ -0.4
PHGDH-216ENST00000641375 TEX43Q6ZNM6 134 aa12.57□□□□□ -0.4
PHGDH-216ENST00000641375 C20orf202A1L168 122 aa12.56□□□□□ -0.4
PHGDH-216ENST00000641375 LCN12Q6JVE5 192 aa12.56□□□□□ -0.4
PHGDH-216ENST00000641375 IGHV7-4-1A0A0J9YVY3 117 aa12.56□□□□□ -0.4
PHGDH-216ENST00000641375 FAM181BA6NEQ2 426 aa12.56□□□□□ -0.4
PHGDH-216ENST00000641375 P01737 135 aa12.56□□□□□ -0.4
PHGDH-216ENST00000641375 ACANP16112 2415 aa12.56□□□□□ -0.4
PHGDH-216ENST00000641375 C8orf86Q6ZUL3 223 aa12.56□□□□□ -0.4
PHGDH-216ENST00000641375 ORAOV1Q8WV07 137 aa12.56□□□□□ -0.4
PHGDH-216ENST00000641375 MRPL53Q96EL3 112 aaKnown RBP12.56□□□□□ -0.4
PHGDH-216ENST00000641375 C19orf71A6NCJ1 209 aa12.55□□□□□ -0.4
PHGDH-216ENST00000641375 ZNF705FA8MVS1 300 aaPredicted RBP12.55□□□□□ -0.4
PHGDH-216ENST00000641375 ZNF705DP0CH99 300 aaPredicted RBP12.55□□□□□ -0.4
PHGDH-216ENST00000641375 ZNF705BP0CI00 300 aaPredicted RBP12.55□□□□□ -0.4
PHGDH-216ENST00000641375 CT83Q5H943 113 aa12.55□□□□□ -0.4
PHGDH-216ENST00000641375 IGFL4Q6B9Z1 124 aa12.55□□□□□ -0.4
PHGDH-216ENST00000641375 SVIPQ8NHG7 77 aa12.55□□□□□ -0.4
PHGDH-216ENST00000641375 UFC1Q9Y3C8 167 aa12.55□□□□□ -0.4
PHGDH-216ENST00000641375 RBAKDNA6NC62 111 aa12.54□□□□□ -0.4
PHGDH-216ENST00000641375 KLHDC1Q8N7A1 406 aa12.54□□□□□ -0.4
PHGDH-216ENST00000641375 RPP21Q9H633 154 aaKnown RBP12.54□□□□□ -0.4
PHGDH-216ENST00000641375 MYO9AB2RTY4 2548 aa12.54□□□□□ -0.4
PHGDH-216ENST00000641375 IGKV2-40A0A087WW87 121 aaPredicted RBP12.54□□□□□ -0.4
PHGDH-216ENST00000641375 IGKV2D-40P01614 121 aaPredicted RBP12.54□□□□□ -0.4
PHGDH-216ENST00000641375 BMI1P35226 326 aa12.54□□□□□ -0.4
PHGDH-216ENST00000641375 TM4SF20Q53R12 229 aa12.54□□□□□ -0.4
PHGDH-216ENST00000641375 LINC00322Q6ZN03 302 aaPredicted RBP12.54□□□□□ -0.4
PHGDH-216ENST00000641375 TSKUQ8WUA8 353 aa12.54□□□□□ -0.4
PHGDH-216ENST00000641375 CA1P00915 261 aaPredicted RBP12.53□□□□□ -0.4
PHGDH-216ENST00000641375 CT45A10P0DMU9 189 aa12.53□□□□□ -0.4
PHGDH-216ENST00000641375 HLA-DMBP28068 263 aa12.53□□□□□ -0.4
PHGDH-216ENST00000641375 OR4B1Q8NGF8 309 aa12.53□□□□□ -0.4
PHGDH-216ENST00000641375 RHPN1-AS1Q9BWJ2 59 aa12.53□□□□□ -0.4
PHGDH-216ENST00000641375 NAT8BQ9UHF3 227 aa12.53□□□□□ -0.4
PHGDH-216ENST00000641375 SMPXQ9UHP9 88 aa12.53□□□□□ -0.4
PHGDH-216ENST00000641375 CHTOPQ9Y3Y2 248 aaKnown RBP12.53□□□□□ -0.4
PHGDH-216ENST00000641375 A8MWL6 223 aa12.53□□□□□ -0.4
PHGDH-216ENST00000641375 COX19Q49B96 90 aa12.53□□□□□ -0.4
PHGDH-216ENST00000641375 Q6ZSV7 163 aa12.53□□□□□ -0.4
PHGDH-216ENST00000641375 ZC2HC1AQ96GY0 325 aa12.53□□□□□ -0.4
PHGDH-216ENST00000641375 C16orf92Q96LL3 132 aa12.53□□□□□ -0.4
PHGDH-216ENST00000641375 TRAPPC1Q9Y5R8 145 aa12.53□□□□□ -0.4
PHGDH-216ENST00000641375 TRAV8-2A0A0B4J237 113 aa12.52□□□□□ -0.4
PHGDH-216ENST00000641375 IZUMO1RA6ND01 250 aa12.52□□□□□ -0.4
PHGDH-216ENST00000641375 NPIPB6E9PJ23 425 aa12.52□□□□□ -0.4
PHGDH-216ENST00000641375 TCL1AP56279 114 aa12.52□□□□□ -0.4
PHGDH-216ENST00000641375 COX8CQ7Z4L0 72 aa12.52□□□□□ -0.4
PHGDH-216ENST00000641375 RNF182Q8N6D2 247 aa12.52□□□□□ -0.4
PHGDH-216ENST00000641375 ESM1Q9NQ30 184 aa12.52□□□□□ -0.4
PHGDH-216ENST00000641375 PPBPP02775 128 aa12.52□□□□□ -0.41
PHGDH-216ENST00000641375 PRR25Q96S07 402 aa12.52□□□□□ -0.41
PHGDH-216ENST00000641375 LGALS9O00182 355 aa12.51□□□□□ -0.41
PHGDH-216ENST00000641375 PRB4P10163 310 aaPredicted RBP12.51□□□□□ -0.41
PHGDH-216ENST00000641375 PTTG1IPP53801 180 aa12.51□□□□□ -0.41
PHGDH-216ENST00000641375 SMIM15Q7Z3B0 74 aa12.51□□□□□ -0.41
PHGDH-216ENST00000641375 VGLL1Q99990 258 aa12.51□□□□□ -0.41
PHGDH-216ENST00000641375 NDFIP1Q9BT67 221 aa12.51□□□□□ -0.41
PHGDH-216ENST00000641375 GFRA4Q9GZZ7 299 aa12.51□□□□□ -0.41
PHGDH-216ENST00000641375 NRN1Q9NPD7 142 aa12.51□□□□□ -0.41
PHGDH-216ENST00000641375 FAM231BA6NCW3 169 aa12.5□□□□□ -0.41
PHGDH-216ENST00000641375 CCL25O15444 150 aa12.5□□□□□ -0.41
PHGDH-216ENST00000641375 SRD5A1P18405 259 aa12.5□□□□□ -0.41
PHGDH-216ENST00000641375 RPL11P62913 178 aaKnown RBP12.5□□□□□ -0.41
PHGDH-216ENST00000641375 BATFQ16520 125 aa12.5□□□□□ -0.41
PHGDH-216ENST00000641375 WDR73Q6P4I2 378 aa12.5□□□□□ -0.41
PHGDH-216ENST00000641375 OR2D3Q8NGH3 330 aa12.5□□□□□ -0.41
PHGDH-216ENST00000641375 ZNF418Q8TF45 676 aaPredicted RBP12.5□□□□□ -0.41
PHGDH-216ENST00000641375 GNB1LQ9BYB4 327 aa12.5□□□□□ -0.41
PHGDH-216ENST00000641375 HIGD1CA8MV81 97 aa12.5□□□□□ -0.41
PHGDH-216ENST00000641375 RNASE1P07998 156 aaKnown RBP12.5□□□□□ -0.41
PHGDH-216ENST00000641375 PAFAH1B2P68402 229 aa12.5□□□□□ -0.41
PHGDH-216ENST00000641375 RASL11AQ6T310 242 aa12.5□□□□□ -0.41
PHGDH-216ENST00000641375 NUP35Q8NFH5 326 aa12.5□□□□□ -0.41
PHGDH-216ENST00000641375 IGHV4OR15-8A0A075B7B6 117 aa12.49□□□□□ -0.41
PHGDH-216ENST00000641375 A0A087WW49 117 aa12.49□□□□□ -0.41
PHGDH-216ENST00000641375 MT-ND6P03923 174 aa12.49□□□□□ -0.41
PHGDH-216ENST00000641375 SAMD13Q5VXD3 122 aa12.49□□□□□ -0.41
PHGDH-216ENST00000641375 C8orf49Q96NF6 230 aa12.49□□□□□ -0.41
PHGDH-216ENST00000641375 HOXD3P31249 432 aaPredicted RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 246.7 ms