RNA–Protein interactions for RNA: ENST00000640482.1

VEGFA-230, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,065 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-230ENST00000640482 ATG101Q9BSB4 218 aa17.72■□□□□ 0.43
VEGFA-230ENST00000640482 MBD2Q9UBB5 411 aa17.72■□□□□ 0.43
VEGFA-230ENST00000640482 HECTD4Q9Y4D8 3996 aa17.72■□□□□ 0.43
VEGFA-230ENST00000640482 IGLV2-18A0A075B6J9 118 aa17.71■□□□□ 0.43
VEGFA-230ENST00000640482 KLLNB2CW77 178 aa17.71■□□□□ 0.43
VEGFA-230ENST00000640482 OR7C2O60412 319 aa17.71■□□□□ 0.43
VEGFA-230ENST00000640482 NUDT3O95989 172 aa17.71■□□□□ 0.43
VEGFA-230ENST00000640482 OR10J4P0C629 311 aa17.71■□□□□ 0.43
VEGFA-230ENST00000640482 FAM3BP58499 235 aaPredicted RBP17.71■□□□□ 0.43
VEGFA-230ENST00000640482 FFAR4Q5NUL3 377 aa17.71■□□□□ 0.43
VEGFA-230ENST00000640482 TMEM78Q5T7P6 136 aa17.71■□□□□ 0.43
VEGFA-230ENST00000640482 FXYD5Q96DB9 178 aa17.71■□□□□ 0.43
VEGFA-230ENST00000640482 FAM19A4Q96LR4 140 aa17.71■□□□□ 0.43
VEGFA-230ENST00000640482 SMIM3Q9BZL3 60 aa17.71■□□□□ 0.43
VEGFA-230ENST00000640482 LINC00612Q8N6U2 182 aa17.7■□□□□ 0.42
VEGFA-230ENST00000640482 IGKV2-40A0A087WW87 121 aaPredicted RBP17.69■□□□□ 0.42
VEGFA-230ENST00000640482 IGKV2D-40P01614 121 aaPredicted RBP17.69■□□□□ 0.42
VEGFA-230ENST00000640482 ZNF680Q8NEM1 530 aa17.69■□□□□ 0.42
VEGFA-230ENST00000640482 GPX1P07203 203 aa17.68■□□□□ 0.42
VEGFA-230ENST00000640482 NMBP08949 121 aa17.68■□□□□ 0.42
VEGFA-230ENST00000640482 CRISP2P16562 243 aa17.68■□□□□ 0.42
VEGFA-230ENST00000640482 TAS2R45P59539 299 aa17.68■□□□□ 0.42
VEGFA-230ENST00000640482 BTN1A1Q13410 526 aa17.68■□□□□ 0.42
VEGFA-230ENST00000640482 PHYHIPLQ96FC7 376 aa17.68■□□□□ 0.42
VEGFA-230ENST00000640482 GAGE12BA1L429 117 aa17.67■□□□□ 0.42
VEGFA-230ENST00000640482 GAGE7O76087 117 aa17.67■□□□□ 0.42
VEGFA-230ENST00000640482 GAGE12FP0CL80 117 aa17.67■□□□□ 0.42
VEGFA-230ENST00000640482 GAGE12GP0CL81 117 aa17.67■□□□□ 0.42
VEGFA-230ENST00000640482 GAGE12IP0CL82 117 aa17.67■□□□□ 0.42
VEGFA-230ENST00000640482 RNASE4P34096 147 aaKnown RBP17.67■□□□□ 0.42
VEGFA-230ENST00000640482 CSN1S1P47710 185 aa17.67■□□□□ 0.42
VEGFA-230ENST00000640482 CD300CQ08708 224 aa17.67■□□□□ 0.42
VEGFA-230ENST00000640482 DAZ2Q13117 558 aaKnown RBP17.67■□□□□ 0.42
VEGFA-230ENST00000640482 KHDC3LQ587J8 217 aa17.67■□□□□ 0.42
VEGFA-230ENST00000640482 Q6ZR54 194 aa17.67■□□□□ 0.42
VEGFA-230ENST00000640482 LYPD1Q8N2G4 141 aa17.67■□□□□ 0.42
VEGFA-230ENST00000640482 VGLL1Q99990 258 aa17.67■□□□□ 0.42
VEGFA-230ENST00000640482 LINC00467Q9BRT7 94 aa17.67■□□□□ 0.42
VEGFA-230ENST00000640482 ALG5Q9Y673 324 aa17.67■□□□□ 0.42
VEGFA-230ENST00000640482 ZNF324O75467 553 aaPredicted RBP17.66■□□□□ 0.42
VEGFA-230ENST00000640482 UBE2L3P68036 154 aaKnown RBP17.66■□□□□ 0.42
VEGFA-230ENST00000640482 OR5I1Q13606 314 aa17.66■□□□□ 0.42
VEGFA-230ENST00000640482 EIF4E3Q8N5X7 224 aaKnown RBP17.66■□□□□ 0.42
VEGFA-230ENST00000640482 ZNF492Q9P255 531 aa17.66■□□□□ 0.42
VEGFA-230ENST00000640482 RTL8CO15255 209 aa17.65■□□□□ 0.42
VEGFA-230ENST00000640482 CCL18P55774 89 aa17.65■□□□□ 0.42
VEGFA-230ENST00000640482 RANP62826 216 aaKnown RBP17.65■□□□□ 0.42
VEGFA-230ENST00000640482 ZNF503Q96F45 646 aa17.65■□□□□ 0.42
VEGFA-230ENST00000640482 DNAH2Q9P225 4427 aa17.64■□□□□ 0.41
VEGFA-230ENST00000640482 PRSS29PA6NIE9 313 aa17.64■□□□□ 0.41
VEGFA-230ENST00000640482 PTTG1O95997 202 aa17.64■□□□□ 0.41
VEGFA-230ENST00000640482 ZNF138P52744 262 aa17.64■□□□□ 0.41
VEGFA-230ENST00000640482 ANXA2RQ3ZCQ2 193 aa17.64■□□□□ 0.41
VEGFA-230ENST00000640482 Q9H3A6 140 aa17.64■□□□□ 0.41
VEGFA-230ENST00000640482 GSN-AS1Q9NRJ2 163 aa17.64■□□□□ 0.41
VEGFA-230ENST00000640482 TRBV7-9A0A0J9YWB2 115 aa17.63■□□□□ 0.41
VEGFA-230ENST00000640482 M6PRP20645 277 aa17.63■□□□□ 0.41
VEGFA-230ENST00000640482 ACOT6Q3I5F7 207 aaPredicted RBP17.63■□□□□ 0.41
VEGFA-230ENST00000640482 SOHLH1Q5JUK2 328 aa17.63■□□□□ 0.41
VEGFA-230ENST00000640482 ZFAND2AQ8N6M9 145 aa17.63■□□□□ 0.41
VEGFA-230ENST00000640482 GNPNAT1Q96EK6 184 aaPredicted RBP17.63■□□□□ 0.41
VEGFA-230ENST00000640482 WFDC1Q9HC57 220 aa17.63■□□□□ 0.41
VEGFA-230ENST00000640482 TRAV26-1A0A087WT03 109 aa17.62■□□□□ 0.41
VEGFA-230ENST00000640482 RBAKDNA6NC62 111 aa17.62■□□□□ 0.41
VEGFA-230ENST00000640482 Q6ZTI0 123 aa17.62■□□□□ 0.41
VEGFA-230ENST00000640482 C11orf72Q8NBR9 251 aa17.62■□□□□ 0.41
VEGFA-230ENST00000640482 RGS13O14921 159 aa17.61■□□□□ 0.41
VEGFA-230ENST00000640482 PRR9Q5T870 116 aa17.61■□□□□ 0.41
VEGFA-230ENST00000640482 FAT2Q9NYQ8 4349 aa17.6■□□□□ 0.41
VEGFA-230ENST00000640482 A0A1W2PPV4 95 aa17.6■□□□□ 0.41
VEGFA-230ENST00000640482 HOXA5P20719 270 aa17.6■□□□□ 0.41
VEGFA-230ENST00000640482 Q8TAT8 98 aa17.6■□□□□ 0.41
VEGFA-230ENST00000640482 RXFP4Q8TDU9 374 aa17.6■□□□□ 0.41
VEGFA-230ENST00000640482 MED28Q9H204 178 aa17.6■□□□□ 0.41
VEGFA-230ENST00000640482 NACAE9PAV3 2078 aa17.59■□□□□ 0.41
VEGFA-230ENST00000640482 TRGV2A0A075B6R0 118 aa17.59■□□□□ 0.41
VEGFA-230ENST00000640482 A0A1B0GVY2 172 aa17.59■□□□□ 0.41
VEGFA-230ENST00000640482 IBA57Q5T440 356 aaKnown RBP17.59■□□□□ 0.41
VEGFA-230ENST00000640482 C1orf134Q5TEV5 83 aa17.59■□□□□ 0.41
VEGFA-230ENST00000640482 ZNRF2Q8NHG8 242 aa17.59■□□□□ 0.41
VEGFA-230ENST00000640482 ARPC5LQ9BPX5 153 aa17.59■□□□□ 0.41
VEGFA-230ENST00000640482 TMPRSS5Q9H3S3 457 aa17.59■□□□□ 0.41
VEGFA-230ENST00000640482 DNAH17Q9UFH2 4485 aa17.59■□□□□ 0.41
VEGFA-230ENST00000640482 IGHV1OR15-1A0A075B7D0 117 aa17.58■□□□□ 0.4
VEGFA-230ENST00000640482 TRGV1A0A0A0MS02 117 aa17.58■□□□□ 0.4
VEGFA-230ENST00000640482 A0A0J9YY99 117 aa17.58■□□□□ 0.4
VEGFA-230ENST00000640482 TCL1AP56279 114 aa17.58■□□□□ 0.4
VEGFA-230ENST00000640482 ZNF266Q14584 549 aa17.58■□□□□ 0.4
VEGFA-230ENST00000640482 PQLC2Q6ZP29 291 aa17.58■□□□□ 0.4
VEGFA-230ENST00000640482 C18orf15Q96N68 181 aa17.58■□□□□ 0.4
VEGFA-230ENST00000640482 LINC00588Q9Y4M8 146 aa17.58■□□□□ 0.4
VEGFA-230ENST00000640482 DIRC3C9JPN6 131 aa17.57■□□□□ 0.4
VEGFA-230ENST00000640482 H3BNG1 76 aa17.57■□□□□ 0.4
VEGFA-230ENST00000640482 FAM74A1Q5RGS3 127 aa17.57■□□□□ 0.4
VEGFA-230ENST00000640482 OTORQ9NRC9 128 aa17.57■□□□□ 0.4
VEGFA-230ENST00000640482 KLF12Q9Y4X4 402 aa17.57■□□□□ 0.4
VEGFA-230ENST00000640482 SPINK4O60575 86 aa17.56■□□□□ 0.4
VEGFA-230ENST00000640482 EIF3GO75821 320 aaKnown RBP eCLIP17.56■□□□□ 0.4
VEGFA-230ENST00000640482 SSX7Q7RTT5 188 aa17.56■□□□□ 0.4
VEGFA-230ENST00000640482 CMTM2Q8TAZ6 248 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms