RNA–Protein interactions for RNA: ENST00000639483.1

KCNMA1-260, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

TSL 5

Gene KCNMA1, Length 4,021 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-260ENST00000639483 SLC25A16P16260 332 aa12.66□□□□□ -0.38
KCNMA1-260ENST00000639483 YAE1D1Q9NRH1 226 aa12.66□□□□□ -0.38
KCNMA1-260ENST00000639483 FN1P02751 2386 aaKnown RBP12.66□□□□□ -0.38
KCNMA1-260ENST00000639483 LYPD1Q8N2G4 141 aa12.66□□□□□ -0.38
KCNMA1-260ENST00000639483 IFITM10A6NMD0 228 aa12.65□□□□□ -0.38
KCNMA1-260ENST00000639483 LINC00614P0C842 121 aa12.65□□□□□ -0.38
KCNMA1-260ENST00000639483 TMEM70Q9BUB7 260 aa12.65□□□□□ -0.38
KCNMA1-260ENST00000639483 TMEM14CQ9P0S9 112 aa12.65□□□□□ -0.38
KCNMA1-260ENST00000639483 D6R8Y8 96 aa12.65□□□□□ -0.38
KCNMA1-260ENST00000639483 ZNF664Q8N3J9 261 aa12.65□□□□□ -0.38
KCNMA1-260ENST00000639483 OR10AG1Q8NH19 301 aa12.65□□□□□ -0.38
KCNMA1-260ENST00000639483 IGF2BP2-AS1Q96M15 143 aa12.65□□□□□ -0.38
KCNMA1-260ENST00000639483 SMIM27A0A1W2PRY6 76 aa12.65□□□□□ -0.39
KCNMA1-260ENST00000639483 ORMDL3Q8N138 153 aa12.65□□□□□ -0.39
KCNMA1-260ENST00000639483 C18orf32Q8TCD1 76 aa12.65□□□□□ -0.39
KCNMA1-260ENST00000639483 MAP1LC3AQ9H492 121 aa12.65□□□□□ -0.39
KCNMA1-260ENST00000639483 HINT1P49773 126 aaPredicted RBP12.64□□□□□ -0.39
KCNMA1-260ENST00000639483 PSMG4Q5JS54 123 aa12.64□□□□□ -0.39
KCNMA1-260ENST00000639483 FAM159AQ6UWV7 190 aa12.64□□□□□ -0.39
KCNMA1-260ENST00000639483 SYNJ2BPP57105 145 aa12.64□□□□□ -0.39
KCNMA1-260ENST00000639483 CTAG1AP78358 180 aa12.64□□□□□ -0.39
KCNMA1-260ENST00000639483 PDE6HQ13956 83 aa12.64□□□□□ -0.39
KCNMA1-260ENST00000639483 OR10J3Q5JRS4 329 aa12.64□□□□□ -0.39
KCNMA1-260ENST00000639483 A0A1B0GV90 55 aa12.64□□□□□ -0.39
KCNMA1-260ENST00000639483 PSMB11A5LHX3 300 aa12.64□□□□□ -0.39
KCNMA1-260ENST00000639483 SPRY2O43597 315 aa12.64□□□□□ -0.39
KCNMA1-260ENST00000639483 DEFB1P60022 68 aa12.64□□□□□ -0.39
KCNMA1-260ENST00000639483 ATP5L2Q7Z4Y8 100 aa12.64□□□□□ -0.39
KCNMA1-260ENST00000639483 DSCAML1Q8TD84 2053 aa12.63□□□□□ -0.39
KCNMA1-260ENST00000639483 SNRPD3P62318 126 aaKnown RBP12.63□□□□□ -0.39
KCNMA1-260ENST00000639483 C5orf56Q8N8D9 126 aa12.63□□□□□ -0.39
KCNMA1-260ENST00000639483 C3orf79P0CE67 100 aa12.63□□□□□ -0.39
KCNMA1-260ENST00000639483 DMRTA1Q5VZB9 504 aa12.63□□□□□ -0.39
KCNMA1-260ENST00000639483 C8orf86Q6ZUL3 223 aa12.63□□□□□ -0.39
KCNMA1-260ENST00000639483 YPEL4Q96NS1 127 aa12.63□□□□□ -0.39
KCNMA1-260ENST00000639483 PRR25Q96S07 402 aa12.63□□□□□ -0.39
KCNMA1-260ENST00000639483 OR4C46A6NHA9 309 aa12.63□□□□□ -0.39
KCNMA1-260ENST00000639483 NMUP48645 174 aa12.63□□□□□ -0.39
KCNMA1-260ENST00000639483 LINC00322Q6ZN03 302 aaPredicted RBP12.63□□□□□ -0.39
KCNMA1-260ENST00000639483 FAM231DQ6ZW35 169 aa12.62□□□□□ -0.39
KCNMA1-260ENST00000639483 KLF2Q9Y5W3 355 aaPredicted RBP12.62□□□□□ -0.39
KCNMA1-260ENST00000639483 F6UB75 175 aa12.62□□□□□ -0.39
KCNMA1-260ENST00000639483 LTAP01374 205 aa12.62□□□□□ -0.39
KCNMA1-260ENST00000639483 Q6AWC8 147 aa12.62□□□□□ -0.39
KCNMA1-260ENST00000639483 ZNF502Q8TBZ5 544 aa12.62□□□□□ -0.39
KCNMA1-260ENST00000639483 IGLV2-8P01709 118 aa12.61□□□□□ -0.39
KCNMA1-260ENST00000639483 PLP1P60201 277 aa12.61□□□□□ -0.39
KCNMA1-260ENST00000639483 HIST2H2BCQ6DN03 193 aa12.61□□□□□ -0.39
KCNMA1-260ENST00000639483 Q6ZWC4 215 aa12.61□□□□□ -0.39
KCNMA1-260ENST00000639483 REC114Q7Z4M0 266 aa12.61□□□□□ -0.39
KCNMA1-260ENST00000639483 FAM223BA6NKX1 122 aa12.61□□□□□ -0.39
KCNMA1-260ENST00000639483 TRBV12-3P01733 135 aa12.61□□□□□ -0.39
KCNMA1-260ENST00000639483 FAM223AQ8IWN6 122 aa12.61□□□□□ -0.39
KCNMA1-260ENST00000639483 PEF1Q9UBV8 284 aaKnown RBP12.6□□□□□ -0.39
KCNMA1-260ENST00000639483 KALRNO60229 2985 aa12.6□□□□□ -0.39
KCNMA1-260ENST00000639483 PRAC2D3DTV9 90 aa12.6□□□□□ -0.39
KCNMA1-260ENST00000639483 ASIPP42127 132 aa12.6□□□□□ -0.39
KCNMA1-260ENST00000639483 USMG5Q96IX5 58 aa12.6□□□□□ -0.39
KCNMA1-260ENST00000639483 CD7P09564 240 aa12.59□□□□□ -0.39
KCNMA1-260ENST00000639483 PAX1P15863 534 aa12.59□□□□□ -0.39
KCNMA1-260ENST00000639483 DUX3Q96PT4 197 aa12.59□□□□□ -0.39
KCNMA1-260ENST00000639483 CBY1Q9Y3M2 126 aa12.59□□□□□ -0.39
KCNMA1-260ENST00000639483 ZNF492Q9P255 531 aa12.59□□□□□ -0.39
KCNMA1-260ENST00000639483 PRDM13Q9H4Q3 707 aa12.59□□□□□ -0.39
KCNMA1-260ENST00000639483 LRBAP50851 2863 aa12.59□□□□□ -0.39
KCNMA1-260ENST00000639483 NUDT3O95989 172 aa12.59□□□□□ -0.39
KCNMA1-260ENST00000639483 VAMP3Q15836 100 aa12.59□□□□□ -0.39
KCNMA1-260ENST00000639483 GTSF1Q8WW33 167 aa12.59□□□□□ -0.39
KCNMA1-260ENST00000639483 DAZ1Q9NQZ3 744 aaKnown RBP12.59□□□□□ -0.39
KCNMA1-260ENST00000639483 LOC102724200A0A096LPH7 203 aaPredicted RBP12.58□□□□□ -0.4
KCNMA1-260ENST00000639483 HOXA3O43365 443 aaPredicted RBP12.58□□□□□ -0.4
KCNMA1-260ENST00000639483 MYOZ3Q8TDC0 251 aa12.58□□□□□ -0.4
KCNMA1-260ENST00000639483 UQCR10Q9UDW1 63 aa12.58□□□□□ -0.4
KCNMA1-260ENST00000639483 A8MWP6 167 aa12.58□□□□□ -0.4
KCNMA1-260ENST00000639483 Q0VG73 95 aa12.58□□□□□ -0.4
KCNMA1-260ENST00000639483 C9orf139Q6ZV77 190 aa12.58□□□□□ -0.4
KCNMA1-260ENST00000639483 ALKBH7Q9BT30 221 aaPredicted RBP12.58□□□□□ -0.4
KCNMA1-260ENST00000639483 TRAV12-3A0A0B4J271 114 aa12.57□□□□□ -0.4
KCNMA1-260ENST00000639483 FAM181BA6NEQ2 426 aa12.57□□□□□ -0.4
KCNMA1-260ENST00000639483 COL12A1Q99715 3063 aa12.57□□□□□ -0.4
KCNMA1-260ENST00000639483 WI2-2373I1.2A0A1W2PRP0 233 aa12.57□□□□□ -0.4
KCNMA1-260ENST00000639483 BUB3O43684 328 aa12.57□□□□□ -0.4
KCNMA1-260ENST00000639483 FSTL3O95633 263 aa12.57□□□□□ -0.4
KCNMA1-260ENST00000639483 EGR2P11161 476 aaPredicted RBP12.57□□□□□ -0.4
KCNMA1-260ENST00000639483 ZNF25P17030 456 aaPredicted RBP12.57□□□□□ -0.4
KCNMA1-260ENST00000639483 LINC00469Q8N7U9 141 aa12.57□□□□□ -0.4
KCNMA1-260ENST00000639483 TACC2O95359 2948 aa12.57□□□□□ -0.4
KCNMA1-260ENST00000639483 IGLC2P0DOY2 106 aa12.57□□□□□ -0.4
KCNMA1-260ENST00000639483 IFI27P40305 119 aaPredicted RBP12.57□□□□□ -0.4
KCNMA1-260ENST00000639483 DEFB136Q30KP8 78 aa12.57□□□□□ -0.4
KCNMA1-260ENST00000639483 RASL11AQ6T310 242 aa12.57□□□□□ -0.4
KCNMA1-260ENST00000639483 UNQ9165/PRO28630Q6UXU0 137 aa12.57□□□□□ -0.4
KCNMA1-260ENST00000639483 C7orf71A4D174 169 aa12.56□□□□□ -0.4
KCNMA1-260ENST00000639483 AGPAT4-IT1Q9H0P7 198 aa12.56□□□□□ -0.4
KCNMA1-260ENST00000639483 POLR3KQ9Y2Y1 108 aaPredicted RBP12.56□□□□□ -0.4
KCNMA1-260ENST00000639483 TRAV21A0A0B4J279 112 aa12.56□□□□□ -0.4
KCNMA1-260ENST00000639483 ZNF56Q15929 161 aa12.56□□□□□ -0.4
KCNMA1-260ENST00000639483 NDUFAF3Q9BU61 184 aa12.56□□□□□ -0.4
KCNMA1-260ENST00000639483 CBY3A6NI87 242 aa12.56□□□□□ -0.4
KCNMA1-260ENST00000639483 SMIM12Q96EX1 92 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms