RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 C11orf94C9JXX5 98 aa4.97□□□□□ -1.61
UPF3B-205ENST00000636792 TSPOP30536 169 aa4.97□□□□□ -1.61
UPF3B-205ENST00000636792 FGF8P55075 233 aaPredicted RBP4.97□□□□□ -1.61
UPF3B-205ENST00000636792 KRTAP10-11P60412 298 aa4.97□□□□□ -1.61
UPF3B-205ENST00000636792 RANP62826 216 aaKnown RBP4.97□□□□□ -1.61
UPF3B-205ENST00000636792 ICAM4Q14773 271 aa4.97□□□□□ -1.61
UPF3B-205ENST00000636792 TMEM78Q5T7P6 136 aa4.97□□□□□ -1.61
UPF3B-205ENST00000636792 C9orf47Q6ZRZ4 202 aa4.97□□□□□ -1.61
UPF3B-205ENST00000636792 TRPT1Q86TN4 253 aaKnown RBP4.97□□□□□ -1.61
UPF3B-205ENST00000636792 CCDC28AQ8IWP9 274 aa4.97□□□□□ -1.61
UPF3B-205ENST00000636792 FMC1Q96HJ9 113 aa4.97□□□□□ -1.61
UPF3B-205ENST00000636792 FAM210AQ96ND0 272 aa4.97□□□□□ -1.61
UPF3B-205ENST00000636792 NDFIP1Q9BT67 221 aa4.97□□□□□ -1.61
UPF3B-205ENST00000636792 SRD5A3Q9H8P0 318 aa4.97□□□□□ -1.61
UPF3B-205ENST00000636792 MED9Q9NWA0 146 aa4.97□□□□□ -1.61
UPF3B-205ENST00000636792 AURKAIP1Q9NWT8 199 aaPredicted RBP4.97□□□□□ -1.61
UPF3B-205ENST00000636792 MGAM2Q2M2H8 2515 aa4.97□□□□□ -1.61
UPF3B-205ENST00000636792 LOC102724200A0A096LPH7 203 aaPredicted RBP4.96□□□□□ -1.62
UPF3B-205ENST00000636792 RAB19A4D1S5 217 aa4.96□□□□□ -1.62
UPF3B-205ENST00000636792 DIRC3C9JPN6 131 aa4.96□□□□□ -1.62
UPF3B-205ENST00000636792 H3BMM0 161 aa4.96□□□□□ -1.62
UPF3B-205ENST00000636792 PEX7O00628 323 aa4.96□□□□□ -1.62
UPF3B-205ENST00000636792 PAGE4O60829 102 aa4.96□□□□□ -1.62
UPF3B-205ENST00000636792 TCRAP04437 139 aa4.96□□□□□ -1.62
UPF3B-205ENST00000636792 IGHV4-30-4P0DP06 118 aa4.96□□□□□ -1.62
UPF3B-205ENST00000636792 LEPP41159 167 aa4.96□□□□□ -1.62
UPF3B-205ENST00000636792 SUMO1P63165 101 aaKnown RBP4.96□□□□□ -1.62
UPF3B-205ENST00000636792 IFITM2Q01629 132 aa4.96□□□□□ -1.62
UPF3B-205ENST00000636792 ZNF506Q5JVG8 444 aa4.96□□□□□ -1.62
UPF3B-205ENST00000636792 LINC00322Q6ZN03 302 aaPredicted RBP4.96□□□□□ -1.62
UPF3B-205ENST00000636792 FAM24BQ8N5W8 94 aa4.96□□□□□ -1.62
UPF3B-205ENST00000636792 LINC00052Q96N35 136 aa4.96□□□□□ -1.62
UPF3B-205ENST00000636792 PRR25Q96S07 402 aa4.96□□□□□ -1.62
UPF3B-205ENST00000636792 TUBA4BQ9H853 241 aa4.96□□□□□ -1.62
UPF3B-205ENST00000636792 GNG13Q9P2W3 67 aa4.96□□□□□ -1.62
UPF3B-205ENST00000636792 EPDR1Q9UM22 224 aa4.96□□□□□ -1.62
UPF3B-205ENST00000636792 TP53TG1Q9Y2A0 90 aa4.96□□□□□ -1.62
UPF3B-205ENST00000636792 YTHDF2Q9Y5A9 579 aaKnown RBP4.96□□□□□ -1.62
UPF3B-205ENST00000636792 LOC102723971A0A1B0GUV8 181 aa4.95□□□□□ -1.62
UPF3B-205ENST00000636792 RBFOX3A6NFN3 312 aa4.95□□□□□ -1.62
UPF3B-205ENST00000636792 M0R3E3 92 aa4.95□□□□□ -1.62
UPF3B-205ENST00000636792 CRISP2P16562 243 aa4.95□□□□□ -1.62
UPF3B-205ENST00000636792 CDKN1BP46527 198 aa4.95□□□□□ -1.62
UPF3B-205ENST00000636792 CNN1P51911 297 aaKnown RBP4.95□□□□□ -1.62
UPF3B-205ENST00000636792 ZNF138P52744 262 aa4.95□□□□□ -1.62
UPF3B-205ENST00000636792 TAS2R60P59551 318 aa4.95□□□□□ -1.62
UPF3B-205ENST00000636792 SAPCD1Q5SSQ6 148 aa4.95□□□□□ -1.62
UPF3B-205ENST00000636792 CST9LP1Q5W188 147 aa4.95□□□□□ -1.62
UPF3B-205ENST00000636792 UQCC3Q6UW78 93 aa4.95□□□□□ -1.62
UPF3B-205ENST00000636792 Q6ZWC4 215 aa4.95□□□□□ -1.62
UPF3B-205ENST00000636792 COX8CQ7Z4L0 72 aa4.95□□□□□ -1.62
UPF3B-205ENST00000636792 APRG1Q8IVJ8 170 aa4.95□□□□□ -1.62
UPF3B-205ENST00000636792 TMEM256Q8N2U0 113 aa4.95□□□□□ -1.62
UPF3B-205ENST00000636792 EXOC3-AS1Q8N2X6 119 aa4.95□□□□□ -1.62
UPF3B-205ENST00000636792 RNF182Q8N6D2 247 aa4.95□□□□□ -1.62
UPF3B-205ENST00000636792 SPATA25Q9BR10 227 aa4.95□□□□□ -1.62
UPF3B-205ENST00000636792 ZNF492Q9P255 531 aa4.95□□□□□ -1.62
UPF3B-205ENST00000636792 ZFP30Q9Y2G7 519 aa4.95□□□□□ -1.62
UPF3B-205ENST00000636792 KLF12Q9Y4X4 402 aa4.95□□□□□ -1.62
UPF3B-205ENST00000636792 DNHD1Q96M86 4753 aa4.95□□□□□ -1.62
UPF3B-205ENST00000636792 AGRNO00468 2067 aa4.94□□□□□ -1.62
UPF3B-205ENST00000636792 H3BTX0 84 aa4.94□□□□□ -1.62
UPF3B-205ENST00000636792 K7EIL1 84 aa4.94□□□□□ -1.62
UPF3B-205ENST00000636792 AKR1C3P42330 323 aa4.94□□□□□ -1.62
UPF3B-205ENST00000636792 ATP5G3P48201 142 aa4.94□□□□□ -1.62
UPF3B-205ENST00000636792 UBE2G2P60604 165 aa4.94□□□□□ -1.62
UPF3B-205ENST00000636792 UBE2G1P62253 170 aa4.94□□□□□ -1.62
UPF3B-205ENST00000636792 FLI1Q01543 452 aaPredicted RBP4.94□□□□□ -1.62
UPF3B-205ENST00000636792 HIST1H1AQ02539 215 aaPredicted RBP4.94□□□□□ -1.62
UPF3B-205ENST00000636792 PEA15Q15121 130 aa4.94□□□□□ -1.62
UPF3B-205ENST00000636792 TMEM183BQ1AE95 376 aa4.94□□□□□ -1.62
UPF3B-205ENST00000636792 FAM74A3Q4VXF1 159 aa4.94□□□□□ -1.62
UPF3B-205ENST00000636792 ACTL10Q5JWF8 245 aa4.94□□□□□ -1.62
UPF3B-205ENST00000636792 AMTNQ6UX39 209 aa4.94□□□□□ -1.62
UPF3B-205ENST00000636792 GOLT1AQ6ZVE7 132 aa4.94□□□□□ -1.62
UPF3B-205ENST00000636792 EIF4E3Q8N5X7 224 aaKnown RBP4.94□□□□□ -1.62
UPF3B-205ENST00000636792 DEFB125Q8N687 156 aa4.94□□□□□ -1.62
UPF3B-205ENST00000636792 C2CD4CQ8TF44 421 aa4.94□□□□□ -1.62
UPF3B-205ENST00000636792 FAM19A4Q96LR4 140 aa4.94□□□□□ -1.62
UPF3B-205ENST00000636792 B9D2Q9BPU9 175 aa4.94□□□□□ -1.62
UPF3B-205ENST00000636792 BIN3Q9NQY0 253 aa4.94□□□□□ -1.62
UPF3B-205ENST00000636792 IGKV2-40A0A087WW87 121 aaPredicted RBP4.93□□□□□ -1.62
UPF3B-205ENST00000636792 KLLNB2CW77 178 aa4.93□□□□□ -1.62
UPF3B-205ENST00000636792 C9JCJ5 164 aa4.93□□□□□ -1.62
UPF3B-205ENST00000636792 INSP01308 110 aa4.93□□□□□ -1.62
UPF3B-205ENST00000636792 IGKV2D-40P01614 121 aaPredicted RBP4.93□□□□□ -1.62
UPF3B-205ENST00000636792 HLA-DMBP28068 263 aa4.93□□□□□ -1.62
UPF3B-205ENST00000636792 CCL20P78556 96 aa4.93□□□□□ -1.62
UPF3B-205ENST00000636792 TOR2AQ5JU69 321 aa4.93□□□□□ -1.62
UPF3B-205ENST00000636792 Q86TA4 180 aa4.93□□□□□ -1.62
UPF3B-205ENST00000636792 OR4B1Q8NGF8 309 aa4.93□□□□□ -1.62
UPF3B-205ENST00000636792 MRAPQ8TCY5 172 aa4.93□□□□□ -1.62
UPF3B-205ENST00000636792 IGF2BP2-AS1Q96M15 143 aa4.93□□□□□ -1.62
UPF3B-205ENST00000636792 NEU1Q99519 415 aa4.93□□□□□ -1.62
UPF3B-205ENST00000636792 LINC00467Q9BRT7 94 aa4.93□□□□□ -1.62
UPF3B-205ENST00000636792 EIF5A2Q9GZV4 153 aaKnown RBP4.93□□□□□ -1.62
UPF3B-205ENST00000636792 CSTL1Q9H114 145 aa4.93□□□□□ -1.62
UPF3B-205ENST00000636792 WFDC10AQ9H1F0 79 aa4.93□□□□□ -1.62
UPF3B-205ENST00000636792 LY96Q9Y6Y9 160 aa4.93□□□□□ -1.62
UPF3B-205ENST00000636792 CMYA5Q8N3K9 4069 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 372.3 ms