RNA–Protein interactions for RNA: ENST00000635856.1

CHD2-221, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-221ENST00000635856 DEFB110Q30KQ9 67 aa4.82□□□□□ -1.64
CHD2-221ENST00000635856 COX14Q96I36 57 aa4.82□□□□□ -1.64
CHD2-221ENST00000635856 SDK1Q7Z5N4 2213 aa4.82□□□□□ -1.64
CHD2-221ENST00000635856 PCNX3Q9H6A9 2034 aa4.82□□□□□ -1.64
CHD2-221ENST00000635856 SMKR1H3BMG3 65 aa4.82□□□□□ -1.64
CHD2-221ENST00000635856 DNAL4O96015 105 aa4.82□□□□□ -1.64
CHD2-221ENST00000635856 IGLV3-1P01715 115 aa4.82□□□□□ -1.64
CHD2-221ENST00000635856 FKBP2P26885 142 aaKnown RBP4.82□□□□□ -1.64
CHD2-221ENST00000635856 HOXA4Q00056 320 aaPredicted RBP4.82□□□□□ -1.64
CHD2-221ENST00000635856 LYZL1Q6UWQ5 148 aa4.82□□□□□ -1.64
CHD2-221ENST00000635856 Q8N7P7 452 aa4.82□□□□□ -1.64
CHD2-221ENST00000635856 C5orf42Q9H799 3197 aa4.81□□□□□ -1.64
CHD2-221ENST00000635856 TRGV8A0A0C4DH27 118 aa4.81□□□□□ -1.64
CHD2-221ENST00000635856 A0A1W2PNR3 127 aa4.81□□□□□ -1.64
CHD2-221ENST00000635856 CXCL13O43927 109 aa4.81□□□□□ -1.64
CHD2-221ENST00000635856 IGHG2P01859 326 aa4.81□□□□□ -1.64
CHD2-221ENST00000635856 LINC00305Q7Z4B0 112 aa4.81□□□□□ -1.64
CHD2-221ENST00000635856 PLXDC1Q8IUK5 500 aa4.81□□□□□ -1.64
CHD2-221ENST00000635856 Q8IYB0 196 aa4.81□□□□□ -1.64
CHD2-221ENST00000635856 A0A096LNJ9 63 aa4.81□□□□□ -1.64
CHD2-221ENST00000635856 WI2-2373I1.2A0A1W2PRP0 233 aa4.81□□□□□ -1.64
CHD2-221ENST00000635856 C19orf71A6NCJ1 209 aa4.81□□□□□ -1.64
CHD2-221ENST00000635856 PRSS2P07478 247 aa4.81□□□□□ -1.64
CHD2-221ENST00000635856 APRG1Q8IVJ8 170 aa4.81□□□□□ -1.64
CHD2-221ENST00000635856 POM121L12Q8N7R1 296 aa4.81□□□□□ -1.64
CHD2-221ENST00000635856 Q9H3A6 140 aa4.81□□□□□ -1.64
CHD2-221ENST00000635856 TMEM74BQ9NUR3 256 aa4.81□□□□□ -1.64
CHD2-221ENST00000635856 ORMDL2Q53FV1 153 aa4.81□□□□□ -1.64
CHD2-221ENST00000635856 PIP4P2Q8N4L2 257 aa4.81□□□□□ -1.64
CHD2-221ENST00000635856 LINC00311Q8N616 119 aa4.81□□□□□ -1.64
CHD2-221ENST00000635856 DEFB119Q8N690 84 aa4.81□□□□□ -1.64
CHD2-221ENST00000635856 Q8N8P6 123 aa4.81□□□□□ -1.64
CHD2-221ENST00000635856 KLK15Q9H2R5 256 aa4.81□□□□□ -1.64
CHD2-221ENST00000635856 FSCN3Q9NQT6 498 aa4.81□□□□□ -1.64
CHD2-221ENST00000635856 CD164Q04900 197 aa4.8□□□□□ -1.64
CHD2-221ENST00000635856 C4orf48Q5BLP8 95 aa4.8□□□□□ -1.64
CHD2-221ENST00000635856 TMEM200BQ69YZ2 307 aa4.8□□□□□ -1.64
CHD2-221ENST00000635856 CRIP3Q6Q6R5 217 aa4.8□□□□□ -1.64
CHD2-221ENST00000635856 STHQ8IWL8 128 aa4.8□□□□□ -1.64
CHD2-221ENST00000635856 CRIP2P52943 208 aaPredicted RBP4.8□□□□□ -1.64
CHD2-221ENST00000635856 HIST1H4AP62805 103 aaKnown RBP4.8□□□□□ -1.64
CHD2-221ENST00000635856 FAM27E3Q08E93 113 aa4.8□□□□□ -1.64
CHD2-221ENST00000635856 Q86TA4 180 aa4.8□□□□□ -1.64
CHD2-221ENST00000635856 FOXB1Q99853 325 aa4.8□□□□□ -1.64
CHD2-221ENST00000635856 TET1Q8NFU7 2136 aa4.8□□□□□ -1.64
CHD2-221ENST00000635856 KMT2EQ8IZD2 1858 aa4.8□□□□□ -1.64
CHD2-221ENST00000635856 TRIOO75962 3097 aa4.8□□□□□ -1.64
CHD2-221ENST00000635856 A0A1W2PR77 199 aa4.8□□□□□ -1.64
CHD2-221ENST00000635856 ZNF22P17026 224 aaPredicted RBP4.8□□□□□ -1.64
CHD2-221ENST00000635856 DUTP33316 252 aaKnown RBP4.8□□□□□ -1.64
CHD2-221ENST00000635856 MRPS36P82909 103 aaKnown RBP4.8□□□□□ -1.64
CHD2-221ENST00000635856 RSPO4Q2I0M5 234 aaPredicted RBP4.8□□□□□ -1.64
CHD2-221ENST00000635856 FAM27BQ5VT28 67 aa4.8□□□□□ -1.64
CHD2-221ENST00000635856 MORN5Q5VZ52 161 aa4.8□□□□□ -1.64
CHD2-221ENST00000635856 ITLN1Q8WWA0 313 aa4.8□□□□□ -1.64
CHD2-221ENST00000635856 PRSS46E5RG02 174 aa4.8□□□□□ -1.64
CHD2-221ENST00000635856 ZNF32P17041 273 aa4.8□□□□□ -1.64
CHD2-221ENST00000635856 PSMB8P28062 276 aa4.8□□□□□ -1.64
CHD2-221ENST00000635856 LOXL3P58215 753 aa4.8□□□□□ -1.64
CHD2-221ENST00000635856 NSUN5P1Q3KNT7 163 aa4.8□□□□□ -1.64
CHD2-221ENST00000635856 VKORC1L1Q8N0U8 176 aa4.8□□□□□ -1.64
CHD2-221ENST00000635856 TPSG1Q9NRR2 321 aa4.8□□□□□ -1.64
CHD2-221ENST00000635856 LILRA5A6NI73 299 aa4.79□□□□□ -1.64
CHD2-221ENST00000635856 DEFB108AA8MXU0 73 aa4.79□□□□□ -1.64
CHD2-221ENST00000635856 TGFBR3LH3BV60 316 aa4.79□□□□□ -1.64
CHD2-221ENST00000635856 TFF2Q03403 129 aa4.79□□□□□ -1.64
CHD2-221ENST00000635856 RHOHQ15669 191 aa4.79□□□□□ -1.64
CHD2-221ENST00000635856 FAM201AQ5SY85 155 aa4.79□□□□□ -1.64
CHD2-221ENST00000635856 C20orf204Q6ZNR8 217 aa4.79□□□□□ -1.64
CHD2-221ENST00000635856 Q6ZPA2 131 aa4.79□□□□□ -1.64
CHD2-221ENST00000635856 ZNF714Q96N38 554 aa4.79□□□□□ -1.64
CHD2-221ENST00000635856 TANC2Q9HCD6 1990 aa4.79□□□□□ -1.64
CHD2-221ENST00000635856 TMEM178BH3BS89 294 aa4.79□□□□□ -1.64
CHD2-221ENST00000635856 FOXL2NBQ6ZUU3 175 aa4.79□□□□□ -1.64
CHD2-221ENST00000635856 C11orf53Q8IXP5 236 aa4.79□□□□□ -1.64
CHD2-221ENST00000635856 CRIPAKQ8N1N5 446 aa4.79□□□□□ -1.64
CHD2-221ENST00000635856 RNF138Q8WVD3 245 aa4.79□□□□□ -1.64
CHD2-221ENST00000635856 LRRK1Q38SD2 2015 aa4.79□□□□□ -1.64
CHD2-221ENST00000635856 TRAV12-1A0A0B4J245 112 aa4.79□□□□□ -1.64
CHD2-221ENST00000635856 U3KQK5 164 aa4.79□□□□□ -1.64
CHD2-221ENST00000635856 BPTFQ12830 3046 aa4.79□□□□□ -1.64
CHD2-221ENST00000635856 COL4A4P53420 1690 aaPredicted RBP4.78□□□□□ -1.64
CHD2-221ENST00000635856 IGHV3-43A0A0B4J1X8 118 aa4.78□□□□□ -1.64
CHD2-221ENST00000635856 IQCF6A8MYZ5 107 aa4.78□□□□□ -1.64
CHD2-221ENST00000635856 CCL21O00585 134 aa4.78□□□□□ -1.64
CHD2-221ENST00000635856 IGHV3-33P01772 117 aa4.78□□□□□ -1.64
CHD2-221ENST00000635856 IGHV3-43DP0DP04 118 aa4.78□□□□□ -1.64
CHD2-221ENST00000635856 Q6ZSR3 168 aa4.78□□□□□ -1.64
CHD2-221ENST00000635856 MYO7BQ6PIF6 2116 aa4.78□□□□□ -1.64
CHD2-221ENST00000635856 TRAV12-3A0A0B4J271 114 aa4.78□□□□□ -1.64
CHD2-221ENST00000635856 PRSS38A1L453 326 aa4.78□□□□□ -1.64
CHD2-221ENST00000635856 CGB1A6NKQ9 187 aa4.78□□□□□ -1.64
CHD2-221ENST00000635856 C15orf61A6NNL5 157 aa4.78□□□□□ -1.64
CHD2-221ENST00000635856 SRRM4A7MD48 611 aaKnown RBP4.78□□□□□ -1.64
CHD2-221ENST00000635856 P0C879 139 aa4.78□□□□□ -1.64
CHD2-221ENST00000635856 CD40P25942 277 aa4.78□□□□□ -1.64
CHD2-221ENST00000635856 LPAL2Q16609 132 aa4.78□□□□□ -1.64
CHD2-221ENST00000635856 C10orf128Q5T292 105 aa4.78□□□□□ -1.64
CHD2-221ENST00000635856 EEF1AKMT3Q96AZ1 226 aa4.78□□□□□ -1.64
CHD2-221ENST00000635856 EPOPA6NHQ4 379 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms