RNA–Protein interactions for RNA: ENST00000629725.2

TARDBP-228, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 1,031 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-228ENST00000629725 KRTAP29-1A8MX34 341 aaPredicted RBP13.57□□□□□ -0.24
TARDBP-228ENST00000629725 AGPAT2O15120 278 aa13.57□□□□□ -0.24
TARDBP-228ENST00000629725 OPCMLQ14982 345 aa13.57□□□□□ -0.24
TARDBP-228ENST00000629725 NTN5Q8WTR8 489 aaPredicted RBP13.57□□□□□ -0.24
TARDBP-228ENST00000629725 C8orf49Q96NF6 230 aa13.57□□□□□ -0.24
TARDBP-228ENST00000629725 KLLNB2CW77 178 aa13.56□□□□□ -0.24
TARDBP-228ENST00000629725 SCGB1D2O95969 90 aa13.56□□□□□ -0.24
TARDBP-228ENST00000629725 CD300CQ08708 224 aa13.56□□□□□ -0.24
TARDBP-228ENST00000629725 BTN1A1Q13410 526 aa13.56□□□□□ -0.24
TARDBP-228ENST00000629725 GUK1Q16774 197 aa13.56□□□□□ -0.24
TARDBP-228ENST00000629725 IBA57Q5T440 356 aaKnown RBP13.56□□□□□ -0.24
TARDBP-228ENST00000629725 C10orf113Q5VZT2 155 aa13.56□□□□□ -0.24
TARDBP-228ENST00000629725 TMEM14EPQ6UXP3 125 aa13.56□□□□□ -0.24
TARDBP-228ENST00000629725 VGLL1Q99990 258 aa13.56□□□□□ -0.24
TARDBP-228ENST00000629725 PSCAO43653 123 aa13.55□□□□□ -0.24
TARDBP-228ENST00000629725 CRYGDP07320 174 aa13.55□□□□□ -0.24
TARDBP-228ENST00000629725 SRIP30626 198 aa13.55□□□□□ -0.24
TARDBP-228ENST00000629725 FHL2Q14192 279 aa13.55□□□□□ -0.24
TARDBP-228ENST00000629725 MRPL16Q9NX20 251 aaKnown RBP13.55□□□□□ -0.24
TARDBP-228ENST00000629725 E5RGE8 158 aa13.54□□□□□ -0.24
TARDBP-228ENST00000629725 K7EQD1 137 aa13.54□□□□□ -0.24
TARDBP-228ENST00000629725 MPDU1O75352 247 aa13.54□□□□□ -0.24
TARDBP-228ENST00000629725 PLA2G1BP04054 148 aaKnown RBP13.54□□□□□ -0.24
TARDBP-228ENST00000629725 RNASE4P34096 147 aaKnown RBP13.54□□□□□ -0.24
TARDBP-228ENST00000629725 BTCP35070 178 aa13.54□□□□□ -0.24
TARDBP-228ENST00000629725 ERCC8Q13216 396 aa13.54□□□□□ -0.24
TARDBP-228ENST00000629725 IAH1Q2TAA2 248 aaPredicted RBP13.54□□□□□ -0.24
TARDBP-228ENST00000629725 SERTAD4-AS1Q5TG53 156 aa13.54□□□□□ -0.24
TARDBP-228ENST00000629725 C10orf126Q8N4M7 172 aa13.54□□□□□ -0.24
TARDBP-228ENST00000629725 SDHCQ99643 169 aaPredicted RBP13.54□□□□□ -0.24
TARDBP-228ENST00000629725 MRPL32Q9BYC8 188 aaKnown RBP13.54□□□□□ -0.24
TARDBP-228ENST00000629725 HMCN2Q8NDA2 5059 aa13.53□□□□□ -0.24
TARDBP-228ENST00000629725 LRCOL1A6NCL2 159 aa13.53□□□□□ -0.24
TARDBP-228ENST00000629725 FAM19A4Q96LR4 140 aa13.53□□□□□ -0.24
TARDBP-228ENST00000629725 LINC00477Q96M19 166 aa13.53□□□□□ -0.24
TARDBP-228ENST00000629725 FAM30AQ9NZY2 134 aa13.53□□□□□ -0.24
TARDBP-228ENST00000629725 GSKIPQ9P0R6 139 aa13.53□□□□□ -0.24
TARDBP-228ENST00000629725 TP53TG3Q9ULZ0 132 aa13.53□□□□□ -0.24
TARDBP-228ENST00000629725 TRGV4A0A0C4DH28 118 aa13.52□□□□□ -0.25
TARDBP-228ENST00000629725 CENPXA8MT69 81 aa13.52□□□□□ -0.25
TARDBP-228ENST00000629725 RGS13O14921 159 aa13.52□□□□□ -0.25
TARDBP-228ENST00000629725 TSC22D2O75157 780 aa13.52□□□□□ -0.25
TARDBP-228ENST00000629725 GPX1P07203 203 aa13.52□□□□□ -0.25
TARDBP-228ENST00000629725 MRPL53Q96EL3 112 aaKnown RBP13.52□□□□□ -0.25
TARDBP-228ENST00000629725 MGST2Q99735 147 aa13.52□□□□□ -0.25
TARDBP-228ENST00000629725 DNAJC4Q9NNZ3 241 aa13.52□□□□□ -0.25
TARDBP-228ENST00000629725 RCL1Q9Y2P8 373 aaKnown RBP13.52□□□□□ -0.25
TARDBP-228ENST00000629725 LRP1Q07954 4544 aaKnown RBP13.51□□□□□ -0.25
TARDBP-228ENST00000629725 TRAV5A0A0B4J249 113 aa13.51□□□□□ -0.25
TARDBP-228ENST00000629725 M0R3E3 92 aa13.51□□□□□ -0.25
TARDBP-228ENST00000629725 ZNF253O75346 499 aa13.51□□□□□ -0.25
TARDBP-228ENST00000629725 TAS2R30P59541 319 aa13.51□□□□□ -0.25
TARDBP-228ENST00000629725 Q6ZRG5 221 aa13.51□□□□□ -0.25
TARDBP-228ENST00000629725 Q8N814 137 aa13.51□□□□□ -0.25
TARDBP-228ENST00000629725 SYT8Q8NBV8 401 aa13.51□□□□□ -0.25
TARDBP-228ENST00000629725 DEFB104AQ8WTQ1 72 aa13.51□□□□□ -0.25
TARDBP-228ENST00000629725 PCNPQ8WW12 178 aaKnown RBP13.51□□□□□ -0.25
TARDBP-228ENST00000629725 GGACTQ9BVM4 153 aa13.51□□□□□ -0.25
TARDBP-228ENST00000629725 ARL16Q0P5N6 197 aa13.5□□□□□ -0.25
TARDBP-228ENST00000629725 MITD1Q8WV92 249 aa13.5□□□□□ -0.25
TARDBP-228ENST00000629725 ARPC5LQ9BPX5 153 aa13.5□□□□□ -0.25
TARDBP-228ENST00000629725 AGPAT4-IT1Q9H0P7 198 aa13.5□□□□□ -0.25
TARDBP-228ENST00000629725 IGHV1OR15-1A0A075B7D0 117 aa13.49□□□□□ -0.25
TARDBP-228ENST00000629725 MBPP02686 304 aaPredicted RBP13.49□□□□□ -0.25
TARDBP-228ENST00000629725 IL7P13232 177 aa13.49□□□□□ -0.25
TARDBP-228ENST00000629725 GYPEP15421 78 aa13.49□□□□□ -0.25
TARDBP-228ENST00000629725 CRISP2P16562 243 aa13.49□□□□□ -0.25
TARDBP-228ENST00000629725 TRBV19A0A075B6N1 114 aa13.48□□□□□ -0.25
TARDBP-228ENST00000629725 C7orf66A4D0T2 115 aa13.48□□□□□ -0.25
TARDBP-228ENST00000629725 C1QBP02746 253 aa13.48□□□□□ -0.25
TARDBP-228ENST00000629725 ORM1P02763 201 aa13.48□□□□□ -0.25
TARDBP-228ENST00000629725 ZNF415Q09FC8 603 aa13.48□□□□□ -0.25
TARDBP-228ENST00000629725 IQCF2Q8IXL9 164 aa13.48□□□□□ -0.25
TARDBP-228ENST00000629725 CCSO14618 274 aa13.47□□□□□ -0.25
TARDBP-228ENST00000629725 NMBP08949 121 aa13.47□□□□□ -0.25
TARDBP-228ENST00000629725 SFTA3P0C7M3 94 aa13.47□□□□□ -0.25
TARDBP-228ENST00000629725 CAMLGP49069 296 aa13.47□□□□□ -0.25
TARDBP-228ENST00000629725 RAB31Q13636 194 aa13.47□□□□□ -0.25
TARDBP-228ENST00000629725 Q6ZQT7 251 aa13.47□□□□□ -0.25
TARDBP-228ENST00000629725 LINC00528Q8N1L1 170 aa13.47□□□□□ -0.25
TARDBP-228ENST00000629725 OR1L4Q8NGR5 311 aa13.47□□□□□ -0.25
TARDBP-228ENST00000629725 ZNF479Q96JC4 524 aa13.47□□□□□ -0.25
TARDBP-228ENST00000629725 TXNDC17Q9BRA2 123 aa13.47□□□□□ -0.25
TARDBP-228ENST00000629725 C20orf85Q9H1P6 137 aa13.47□□□□□ -0.25
TARDBP-228ENST00000629725 PRELID1Q9Y255 219 aa13.47□□□□□ -0.25
TARDBP-228ENST00000629725 CNPY1Q3B7I2 92 aa13.46□□□□□ -0.25
TARDBP-228ENST00000629725 PRR9Q5T870 116 aa13.46□□□□□ -0.25
TARDBP-228ENST00000629725 C9orf47Q6ZRZ4 202 aa13.46□□□□□ -0.25
TARDBP-228ENST00000629725 NRARPQ7Z6K4 114 aa13.46□□□□□ -0.25
TARDBP-228ENST00000629725 ZFAND2AQ8N6M9 145 aa13.46□□□□□ -0.25
TARDBP-228ENST00000629725 PFDN5Q99471 154 aa13.46□□□□□ -0.25
TARDBP-228ENST00000629725 IGHV3-38A0A0C4DH36 116 aa13.45□□□□□ -0.26
TARDBP-228ENST00000629725 C9JCJ5 164 aa13.45□□□□□ -0.26
TARDBP-228ENST00000629725 L7N2F9 121 aa13.45□□□□□ -0.26
TARDBP-228ENST00000629725 VAMP2P63027 116 aa13.45□□□□□ -0.26
TARDBP-228ENST00000629725 ZNF846Q147U1 533 aa13.45□□□□□ -0.26
TARDBP-228ENST00000629725 TMEM78Q5T7P6 136 aa13.45□□□□□ -0.26
TARDBP-228ENST00000629725 MIC13Q5XKP0 118 aa13.45□□□□□ -0.26
TARDBP-228ENST00000629725 LSM5Q9Y4Y9 91 aaKnown RBP13.45□□□□□ -0.26
TARDBP-228ENST00000629725 TIMM9Q9Y5J7 89 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms