RNA–Protein interactions for RNA: ENST00000629667.2

PDLIM3-213, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 1,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-213ENST00000629667 BCL7BQ9BQE9 202 aa10.6□□□□□ -0.71
PDLIM3-213ENST00000629667 TRAV5A0A0B4J249 113 aa10.59□□□□□ -0.71
PDLIM3-213ENST00000629667 M0R3E3 92 aa10.59□□□□□ -0.71
PDLIM3-213ENST00000629667 ZNF253O75346 499 aa10.59□□□□□ -0.71
PDLIM3-213ENST00000629667 OR4E1P0C645 316 aa10.59□□□□□ -0.71
PDLIM3-213ENST00000629667 RAB31Q13636 194 aa10.59□□□□□ -0.71
PDLIM3-213ENST00000629667 MRPL53Q96EL3 112 aaKnown RBP10.59□□□□□ -0.71
PDLIM3-213ENST00000629667 LINC00477Q96M19 166 aa10.59□□□□□ -0.71
PDLIM3-213ENST00000629667 MRPL16Q9NX20 251 aaKnown RBP10.59□□□□□ -0.71
PDLIM3-213ENST00000629667 RGS13O14921 159 aa10.58□□□□□ -0.72
PDLIM3-213ENST00000629667 NOL3O60936 208 aaKnown RBP10.58□□□□□ -0.72
PDLIM3-213ENST00000629667 GPX1P07203 203 aa10.58□□□□□ -0.72
PDLIM3-213ENST00000629667 CAMLGP49069 296 aa10.58□□□□□ -0.72
PDLIM3-213ENST00000629667 FHL2Q14192 279 aa10.58□□□□□ -0.72
PDLIM3-213ENST00000629667 IAH1Q2TAA2 248 aaPredicted RBP10.58□□□□□ -0.72
PDLIM3-213ENST00000629667 WFDC10BQ8IUB3 73 aa10.58□□□□□ -0.72
PDLIM3-213ENST00000629667 OR1L4Q8NGR5 311 aa10.58□□□□□ -0.72
PDLIM3-213ENST00000629667 VGLL1Q99990 258 aa10.58□□□□□ -0.72
PDLIM3-213ENST00000629667 GSKIPQ9P0R6 139 aa10.58□□□□□ -0.72
PDLIM3-213ENST00000629667 IGLV5-52A0A0A0MRZ9 124 aa10.57□□□□□ -0.72
PDLIM3-213ENST00000629667 E5RGE8 158 aa10.57□□□□□ -0.72
PDLIM3-213ENST00000629667 SRIP30626 198 aa10.57□□□□□ -0.72
PDLIM3-213ENST00000629667 MIC13Q5XKP0 118 aa10.57□□□□□ -0.72
PDLIM3-213ENST00000629667 NRARPQ7Z6K4 114 aa10.57□□□□□ -0.72
PDLIM3-213ENST00000629667 FAM19A4Q96LR4 140 aa10.57□□□□□ -0.72
PDLIM3-213ENST00000629667 PFDN5Q99471 154 aa10.57□□□□□ -0.72
PDLIM3-213ENST00000629667 ARPC5LQ9BPX5 153 aa10.57□□□□□ -0.72
PDLIM3-213ENST00000629667 AGPAT4-IT1Q9H0P7 198 aa10.57□□□□□ -0.72
PDLIM3-213ENST00000629667 TP53TG3Q9ULZ0 132 aa10.57□□□□□ -0.72
PDLIM3-213ENST00000629667 RCL1Q9Y2P8 373 aaKnown RBP10.57□□□□□ -0.72
PDLIM3-213ENST00000629667 V9GYH0 126 aa10.57□□□□□ -0.72
PDLIM3-213ENST00000629667 TRBV19A0A075B6N1 114 aa10.56□□□□□ -0.72
PDLIM3-213ENST00000629667 TRGV4A0A0C4DH28 118 aa10.56□□□□□ -0.72
PDLIM3-213ENST00000629667 C7orf66A4D0T2 115 aa10.56□□□□□ -0.72
PDLIM3-213ENST00000629667 C12orf45Q8N5I9 185 aaPredicted RBP10.56□□□□□ -0.72
PDLIM3-213ENST00000629667 PCNPQ8WW12 178 aaKnown RBP10.56□□□□□ -0.72
PDLIM3-213ENST00000629667 TMEM70Q9BUB7 260 aa10.56□□□□□ -0.72
PDLIM3-213ENST00000629667 MRPL32Q9BYC8 188 aaKnown RBP10.56□□□□□ -0.72
PDLIM3-213ENST00000629667 PRELID1Q9Y255 219 aa10.56□□□□□ -0.72
PDLIM3-213ENST00000629667 IGHV1OR15-1A0A075B7D0 117 aa10.55□□□□□ -0.72
PDLIM3-213ENST00000629667 H3BMQ9 156 aa10.55□□□□□ -0.72
PDLIM3-213ENST00000629667 K7EQD1 137 aa10.55□□□□□ -0.72
PDLIM3-213ENST00000629667 PSCAO43653 123 aa10.55□□□□□ -0.72
PDLIM3-213ENST00000629667 CRISP2P16562 243 aa10.55□□□□□ -0.72
PDLIM3-213ENST00000629667 C10orf126Q8N4M7 172 aa10.55□□□□□ -0.72
PDLIM3-213ENST00000629667 FLVCR2Q9UPI3 526 aa10.55□□□□□ -0.72
PDLIM3-213ENST00000629667 TIMM9Q9Y5J7 89 aa10.55□□□□□ -0.72
PDLIM3-213ENST00000629667 L7N2F9 121 aa10.54□□□□□ -0.72
PDLIM3-213ENST00000629667 NDUFB6O95139 128 aa10.54□□□□□ -0.72
PDLIM3-213ENST00000629667 MBPP02686 304 aaPredicted RBP10.54□□□□□ -0.72
PDLIM3-213ENST00000629667 CRYGDP07320 174 aa10.54□□□□□ -0.72
PDLIM3-213ENST00000629667 NMBP08949 121 aa10.54□□□□□ -0.72
PDLIM3-213ENST00000629667 VAMP2P63027 116 aa10.54□□□□□ -0.72
PDLIM3-213ENST00000629667 ZNF415Q09FC8 603 aa10.54□□□□□ -0.72
PDLIM3-213ENST00000629667 TMEM78Q5T7P6 136 aa10.54□□□□□ -0.72
PDLIM3-213ENST00000629667 C9orf47Q6ZRZ4 202 aa10.54□□□□□ -0.72
PDLIM3-213ENST00000629667 NTN5Q8WTR8 489 aaPredicted RBP10.54□□□□□ -0.72
PDLIM3-213ENST00000629667 AAMDCQ9H7C9 122 aa10.54□□□□□ -0.72
PDLIM3-213ENST00000629667 NDUFB4O95168 129 aa10.53□□□□□ -0.72
PDLIM3-213ENST00000629667 HIST1H1EP10412 219 aaKnown RBP10.53□□□□□ -0.72
PDLIM3-213ENST00000629667 GYPEP15421 78 aa10.53□□□□□ -0.72
PDLIM3-213ENST00000629667 S100A5P33763 92 aa10.53□□□□□ -0.72
PDLIM3-213ENST00000629667 INPP1P49441 399 aa10.53□□□□□ -0.72
PDLIM3-213ENST00000629667 BCAP31P51572 246 aa10.53□□□□□ -0.72
PDLIM3-213ENST00000629667 PDE6HQ13956 83 aa10.53□□□□□ -0.72
PDLIM3-213ENST00000629667 PRR9Q5T870 116 aa10.53□□□□□ -0.72
PDLIM3-213ENST00000629667 EXOC3-AS1Q8N2X6 119 aa10.53□□□□□ -0.72
PDLIM3-213ENST00000629667 ZFAND2AQ8N6M9 145 aa10.53□□□□□ -0.72
PDLIM3-213ENST00000629667 BLNKQ8WV28 456 aa10.53□□□□□ -0.72
PDLIM3-213ENST00000629667 SRRQ9GZT4 340 aa10.53□□□□□ -0.72
PDLIM3-213ENST00000629667 IGKV2-40A0A087WW87 121 aaPredicted RBP10.52□□□□□ -0.73
PDLIM3-213ENST00000629667 NAP1L6A6NFF2 107 aa10.52□□□□□ -0.73
PDLIM3-213ENST00000629667 IGKV2D-40P01614 121 aaPredicted RBP10.52□□□□□ -0.73
PDLIM3-213ENST00000629667 ORM1P02763 201 aa10.52□□□□□ -0.73
PDLIM3-213ENST00000629667 SFTA3P0C7M3 94 aa10.52□□□□□ -0.73
PDLIM3-213ENST00000629667 Q6ZQT7 251 aa10.52□□□□□ -0.73
PDLIM3-213ENST00000629667 IQCF2Q8IXL9 164 aa10.52□□□□□ -0.73
PDLIM3-213ENST00000629667 TXNDC17Q9BRA2 123 aa10.52□□□□□ -0.73
PDLIM3-213ENST00000629667 C20orf85Q9H1P6 137 aa10.52□□□□□ -0.73
PDLIM3-213ENST00000629667 SLC39A9Q9NUM3 307 aa10.52□□□□□ -0.73
PDLIM3-213ENST00000629667 UQCC1Q9NVA1 299 aa10.52□□□□□ -0.73
PDLIM3-213ENST00000629667 TMEM14CQ9P0S9 112 aa10.52□□□□□ -0.73
PDLIM3-213ENST00000629667 WDR83OSQ9Y284 106 aa10.52□□□□□ -0.73
PDLIM3-213ENST00000629667 CST7O76096 145 aa10.51□□□□□ -0.73
PDLIM3-213ENST00000629667 PYYP10082 97 aa10.51□□□□□ -0.73
PDLIM3-213ENST00000629667 RPL29P47914 159 aaKnown RBP10.51□□□□□ -0.73
PDLIM3-213ENST00000629667 CAV2P51636 162 aa10.51□□□□□ -0.73
PDLIM3-213ENST00000629667 ZNF479Q96JC4 524 aa10.51□□□□□ -0.73
PDLIM3-213ENST00000629667 ZNF492Q9P255 531 aa10.51□□□□□ -0.73
PDLIM3-213ENST00000629667 LSM5Q9Y4Y9 91 aaKnown RBP10.51□□□□□ -0.73
PDLIM3-213ENST00000629667 LRCOL1A6NCL2 159 aa10.5□□□□□ -0.73
PDLIM3-213ENST00000629667 C9JCJ5 164 aa10.5□□□□□ -0.73
PDLIM3-213ENST00000629667 BAXQ07812 192 aa10.5□□□□□ -0.73
PDLIM3-213ENST00000629667 ZNF846Q147U1 533 aa10.5□□□□□ -0.73
PDLIM3-213ENST00000629667 FAM122CQ6P4D5 195 aa10.5□□□□□ -0.73
PDLIM3-213ENST00000629667 OR10G4Q8NGN3 311 aa10.5□□□□□ -0.73
PDLIM3-213ENST00000629667 UBE2L5PA0A1B0GUS4 154 aa10.49□□□□□ -0.73
PDLIM3-213ENST00000629667 PLA2G1BP04054 148 aaKnown RBP10.49□□□□□ -0.73
PDLIM3-213ENST00000629667 MUC21Q5SSG8 566 aa10.49□□□□□ -0.73
PDLIM3-213ENST00000629667 Q8N814 137 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms