RNA–Protein interactions for RNA: ENST00000626109.1

LINC00538-201, long intergenic non-protein coding RNA 538, humanhuman

BASIC

Gene LINC00538, Length 1,906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00538-201ENST00000626109 ABCA2Q9BZC7 2435 aa9.07□□□□□ -0.96
LINC00538-201ENST00000626109 MYO9AB2RTY4 2548 aa9.07□□□□□ -0.96
LINC00538-201ENST00000626109 DSCAML1Q8TD84 2053 aa9.07□□□□□ -0.96
LINC00538-201ENST00000626109 OR10J1P30954 320 aa9.07□□□□□ -0.96
LINC00538-201ENST00000626109 KRTAP1-1Q07627 177 aa9.07□□□□□ -0.96
LINC00538-201ENST00000626109 COL5A1-AS1Q5SY13 56 aa9.07□□□□□ -0.96
LINC00538-201ENST00000626109 ZNF833PQ6ZTB9 187 aa9.07□□□□□ -0.96
LINC00538-201ENST00000626109 CMTM2Q8TAZ6 248 aa9.07□□□□□ -0.96
LINC00538-201ENST00000626109 TBX15Q96SF7 602 aa9.07□□□□□ -0.96
LINC00538-201ENST00000626109 TMEM133Q9H2Q1 129 aa9.07□□□□□ -0.96
LINC00538-201ENST00000626109 MRPL16Q9NX20 251 aaKnown RBP9.07□□□□□ -0.96
LINC00538-201ENST00000626109 CREBBPQ92793 2442 aa9.06□□□□□ -0.96
LINC00538-201ENST00000626109 ITPR3Q14573 2671 aa9.06□□□□□ -0.96
LINC00538-201ENST00000626109 CSMD1Q96PZ7 3565 aa9.06□□□□□ -0.96
LINC00538-201ENST00000626109 FAM236DA0A1B0GTK5 79 aa9.06□□□□□ -0.96
LINC00538-201ENST00000626109 INS-IGF2F8WCM5 200 aa9.06□□□□□ -0.96
LINC00538-201ENST00000626109 MT-ND6P03923 174 aa9.06□□□□□ -0.96
LINC00538-201ENST00000626109 OR5G3P0C626 314 aa9.06□□□□□ -0.96
LINC00538-201ENST00000626109 FAM236CP0DP71 79 aa9.06□□□□□ -0.96
LINC00538-201ENST00000626109 CRISP2P16562 243 aa9.06□□□□□ -0.96
LINC00538-201ENST00000626109 COX7A1P24310 79 aa9.06□□□□□ -0.96
LINC00538-201ENST00000626109 ADMP35318 185 aa9.06□□□□□ -0.96
LINC00538-201ENST00000626109 CX3CL1P78423 397 aa9.06□□□□□ -0.96
LINC00538-201ENST00000626109 C1orf194Q5T5A4 169 aa9.06□□□□□ -0.96
LINC00538-201ENST00000626109 OSTCQ9NRP0 149 aa9.06□□□□□ -0.96
LINC00538-201ENST00000626109 ARHGAP32A7KAX9 2087 aa9.06□□□□□ -0.96
LINC00538-201ENST00000626109 TRAV30A0A087WSZ9 112 aa9.05□□□□□ -0.96
LINC00538-201ENST00000626109 IGKV1-16P04430 117 aa9.05□□□□□ -0.96
LINC00538-201ENST00000626109 SAA1P0DJI8 122 aaPredicted RBP9.05□□□□□ -0.96
LINC00538-201ENST00000626109 TEX29Q8N6K0 151 aa9.05□□□□□ -0.96
LINC00538-201ENST00000626109 ARPC1AQ92747 370 aa9.05□□□□□ -0.96
LINC00538-201ENST00000626109 CLEC7AQ9BXN2 247 aa9.05□□□□□ -0.96
LINC00538-201ENST00000626109 GNB1LQ9BYB4 327 aa9.05□□□□□ -0.96
LINC00538-201ENST00000626109 MRPL18Q9H0U6 180 aaKnown RBP9.05□□□□□ -0.96
LINC00538-201ENST00000626109 IGHV2-26A0A0B4J1V2 119 aa9.05□□□□□ -0.96
LINC00538-201ENST00000626109 FAM240AA0A1B0GVK7 77 aa9.05□□□□□ -0.96
LINC00538-201ENST00000626109 RNASE2P10153 161 aaKnown RBP9.05□□□□□ -0.96
LINC00538-201ENST00000626109 CRYBB3P26998 211 aa9.05□□□□□ -0.96
LINC00538-201ENST00000626109 CFHR3Q02985 330 aa9.05□□□□□ -0.96
LINC00538-201ENST00000626109 PRB3Q04118 309 aaPredicted RBP9.05□□□□□ -0.96
LINC00538-201ENST00000626109 KLRD1Q13241 179 aa9.05□□□□□ -0.96
LINC00538-201ENST00000626109 CENPWQ5EE01 88 aa9.05□□□□□ -0.96
LINC00538-201ENST00000626109 PDPNQ86YL7 162 aa9.05□□□□□ -0.96
LINC00538-201ENST00000626109 OR9G1Q8NH87 305 aa9.05□□□□□ -0.96
LINC00538-201ENST00000626109 NDUFA4L2Q9NRX3 87 aa9.05□□□□□ -0.96
LINC00538-201ENST00000626109 SETXQ7Z333 2677 aaKnown RBP9.04□□□□□ -0.96
LINC00538-201ENST00000626109 TRAV40A0A0B4J280 105 aa9.04□□□□□ -0.96
LINC00538-201ENST00000626109 ISLRO14498 428 aa9.04□□□□□ -0.96
LINC00538-201ENST00000626109 BRS3P32247 399 aa9.04□□□□□ -0.96
LINC00538-201ENST00000626109 Q0VG73 95 aa9.04□□□□□ -0.96
LINC00538-201ENST00000626109 GAGE13Q4V321 117 aa9.04□□□□□ -0.96
LINC00538-201ENST00000626109 SLC25A33Q9BSK2 321 aa9.04□□□□□ -0.96
LINC00538-201ENST00000626109 MLST8Q9BVC4 326 aa9.04□□□□□ -0.96
LINC00538-201ENST00000626109 V9GYV3 84 aa9.04□□□□□ -0.96
LINC00538-201ENST00000626109 MED13LQ71F56 2210 aa9.04□□□□□ -0.96
LINC00538-201ENST00000626109 H0YJW9 148 aa9.03□□□□□ -0.96
LINC00538-201ENST00000626109 J3KT08 172 aa9.03□□□□□ -0.96
LINC00538-201ENST00000626109 LY6G6DO95868 133 aa9.03□□□□□ -0.96
LINC00538-201ENST00000626109 AVPP01185 164 aa9.03□□□□□ -0.96
LINC00538-201ENST00000626109 BAGE3Q86Y29 109 aa9.03□□□□□ -0.96
LINC00538-201ENST00000626109 BAGE2Q86Y30 109 aa9.03□□□□□ -0.96
LINC00538-201ENST00000626109 TMEM256Q8N2U0 113 aa9.03□□□□□ -0.96
LINC00538-201ENST00000626109 OR11H6Q8NGC7 330 aa9.03□□□□□ -0.96
LINC00538-201ENST00000626109 TMEM167AQ8TBQ9 72 aa9.03□□□□□ -0.96
LINC00538-201ENST00000626109 DLX4Q92988 240 aaPredicted RBP9.03□□□□□ -0.96
LINC00538-201ENST00000626109 SMR3AQ99954 134 aa9.03□□□□□ -0.96
LINC00538-201ENST00000626109 MRPL20Q9BYC9 149 aaKnown RBP9.03□□□□□ -0.96
LINC00538-201ENST00000626109 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.03□□□□□ -0.96
LINC00538-201ENST00000626109 SNURFLB1AK76 121 aa9.03□□□□□ -0.96
LINC00538-201ENST00000626109 M0R2Z0 102 aa9.03□□□□□ -0.96
LINC00538-201ENST00000626109 CBLN1P23435 193 aa9.03□□□□□ -0.96
LINC00538-201ENST00000626109 ASPHD1Q5U4P2 390 aa9.03□□□□□ -0.96
LINC00538-201ENST00000626109 HCP5Q6MZN7 132 aa9.03□□□□□ -0.96
LINC00538-201ENST00000626109 LINC00311Q8N616 119 aa9.03□□□□□ -0.96
LINC00538-201ENST00000626109 PIFOQ8TCI5 191 aa9.03□□□□□ -0.96
LINC00538-201ENST00000626109 AMMECR1Q9Y4X0 333 aaPredicted RBP9.03□□□□□ -0.96
LINC00538-201ENST00000626109 FLNAP21333 2647 aaKnown RBP9.02□□□□□ -0.96
LINC00538-201ENST00000626109 IGKV1OR2-108A0A075B7D4 117 aa9.02□□□□□ -0.97
LINC00538-201ENST00000626109 IGHV1-69DA0A0B4J2H0 117 aa9.02□□□□□ -0.97
LINC00538-201ENST00000626109 ZNF705FA8MVS1 300 aaPredicted RBP9.02□□□□□ -0.97
LINC00538-201ENST00000626109 IGHV1-69P01742 117 aa9.02□□□□□ -0.97
LINC00538-201ENST00000626109 ZNF705DP0CH99 300 aaPredicted RBP9.02□□□□□ -0.97
LINC00538-201ENST00000626109 ZNF705BP0CI00 300 aaPredicted RBP9.02□□□□□ -0.97
LINC00538-201ENST00000626109 LAGE3Q14657 143 aa9.02□□□□□ -0.97
LINC00538-201ENST00000626109 PMVKQ15126 192 aa9.02□□□□□ -0.97
LINC00538-201ENST00000626109 VMA21Q3ZAQ7 101 aa9.02□□□□□ -0.97
LINC00538-201ENST00000626109 Q6ZS46 218 aa9.02□□□□□ -0.97
LINC00538-201ENST00000626109 WASHC3Q9Y3C0 194 aa9.02□□□□□ -0.97
LINC00538-201ENST00000626109 OTOGQ6ZRI0 2925 aa9.02□□□□□ -0.97
LINC00538-201ENST00000626109 IGHV3OR16-10A0A075B7F0 116 aa9.01□□□□□ -0.97
LINC00538-201ENST00000626109 ODF3BA8MYP8 253 aa9.01□□□□□ -0.97
LINC00538-201ENST00000626109 COX7A2P2O60397 106 aa9.01□□□□□ -0.97
LINC00538-201ENST00000626109 IGHV4-38-2P0DP08 117 aa9.01□□□□□ -0.97
LINC00538-201ENST00000626109 PSG1P11464 419 aa9.01□□□□□ -0.97
LINC00538-201ENST00000626109 FAM120AOSQ5T036 256 aa9.01□□□□□ -0.97
LINC00538-201ENST00000626109 IBA57Q5T440 356 aaKnown RBP9.01□□□□□ -0.97
LINC00538-201ENST00000626109 C10orf113Q5VZT2 155 aa9.01□□□□□ -0.97
LINC00538-201ENST00000626109 SAMD10Q9BYL1 202 aa9.01□□□□□ -0.97
LINC00538-201ENST00000626109 NAT8BQ9UHF3 227 aa9.01□□□□□ -0.97
LINC00538-201ENST00000626109 GRIFINA4D1Z8 144 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms