RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 NDUFA4O00483 81 aa15.13■□□□□ 0.01
PCDHB11-202ENST00000624887 TGFAP01135 160 aa15.13■□□□□ 0.01
PCDHB11-202ENST00000624887 IGLV1-40P01703 118 aa15.13■□□□□ 0.01
PCDHB11-202ENST00000624887 TRBV12-3P01733 135 aa15.13■□□□□ 0.01
PCDHB11-202ENST00000624887 ARMS2P0C7Q2 107 aa15.13■□□□□ 0.01
PCDHB11-202ENST00000624887 LOXL1Q08397 574 aaPredicted RBP15.13■□□□□ 0.01
PCDHB11-202ENST00000624887 RNF182Q8N6D2 247 aa15.13■□□□□ 0.01
PCDHB11-202ENST00000624887 KLK15Q9H2R5 256 aa15.13■□□□□ 0.01
PCDHB11-202ENST00000624887 CSMD2Q7Z408 3487 aa15.13■□□□□ 0.01
PCDHB11-202ENST00000624887 A0A1B0GW15 77 aa15.13■□□□□ 0.01
PCDHB11-202ENST00000624887 PRAC2D3DTV9 90 aa15.13■□□□□ 0.01
PCDHB11-202ENST00000624887 PF4V1P10720 104 aa15.13■□□□□ 0.01
PCDHB11-202ENST00000624887 PMCHP20382 165 aa15.13■□□□□ 0.01
PCDHB11-202ENST00000624887 DEFB113Q30KQ7 82 aa15.13■□□□□ 0.01
PCDHB11-202ENST00000624887 DEFB112Q30KQ8 113 aa15.13■□□□□ 0.01
PCDHB11-202ENST00000624887 GATD1Q8NB37 220 aa15.13■□□□□ 0.01
PCDHB11-202ENST00000624887 MRPL53Q96EL3 112 aaKnown RBP15.13■□□□□ 0.01
PCDHB11-202ENST00000624887 NRN1Q9NPD7 142 aa15.13■□□□□ 0.01
PCDHB11-202ENST00000624887 ZNF580Q9UK33 172 aa15.13■□□□□ 0.01
PCDHB11-202ENST00000624887 LOC102724200A0A096LPH7 203 aaPredicted RBP15.12■□□□□ 0.01
PCDHB11-202ENST00000624887 BMI1P35226 326 aa15.12■□□□□ 0.01
PCDHB11-202ENST00000624887 CFHR3Q02985 330 aa15.12■□□□□ 0.01
PCDHB11-202ENST00000624887 PRR31Q5SQ13 230 aa15.12■□□□□ 0.01
PCDHB11-202ENST00000624887 C8orf86Q6ZUL3 223 aa15.12■□□□□ 0.01
PCDHB11-202ENST00000624887 NDFIP1Q9BT67 221 aa15.12■□□□□ 0.01
PCDHB11-202ENST00000624887 TRAV8-2A0A0B4J237 113 aa15.11■□□□□ 0.01
PCDHB11-202ENST00000624887 RPLP1P05386 114 aaKnown RBP15.11■□□□□ 0.01
PCDHB11-202ENST00000624887 UNQ9165/PRO28630Q6UXU0 137 aa15.11■□□□□ 0.01
PCDHB11-202ENST00000624887 MAPK1IP1LQ8NDC0 245 aa15.11■□□□□ 0.01
PCDHB11-202ENST00000624887 GLMPQ8WWB7 406 aa15.11■□□□□ 0.01
PCDHB11-202ENST00000624887 MIEN1Q9BRT3 115 aa15.11■□□□□ 0.01
PCDHB11-202ENST00000624887 IGHV4-59P01825 116 aa15.11■□□□□ 0.01
PCDHB11-202ENST00000624887 ZNF80P51504 273 aaPredicted RBP15.11■□□□□ 0.01
PCDHB11-202ENST00000624887 ERCC8Q13216 396 aa15.11■□□□□ 0.01
PCDHB11-202ENST00000624887 LRRC75A-AS1Q8N1F1 130 aa15.11■□□□□ 0.01
PCDHB11-202ENST00000624887 CSPG4Q6UVK1 2322 aa15.11■□□□□ 0.01
PCDHB11-202ENST00000624887 USP9YO00507 2555 aaPredicted RBP15.1■□□□□ 0.01
PCDHB11-202ENST00000624887 A0A0G2JLM5 398 aa15.1■□□□□ 0.01
PCDHB11-202ENST00000624887 IGHV3-11P01762 117 aa15.1■□□□□ 0.01
PCDHB11-202ENST00000624887 BORCS7Q96B45 105 aa15.1■□□□□ 0.01
PCDHB11-202ENST00000624887 RNF114Q9Y508 228 aa15.1■□□□□ 0.01
PCDHB11-202ENST00000624887 RNF223E7ERA6 249 aa15.09■□□□□ 0.01
PCDHB11-202ENST00000624887 DLEU1O43261 78 aa15.09■□□□□ 0.01
PCDHB11-202ENST00000624887 ZNF705DP0CH99 300 aaPredicted RBP15.09■□□□□ 0.01
PCDHB11-202ENST00000624887 ZNF705BP0CI00 300 aaPredicted RBP15.09■□□□□ 0.01
PCDHB11-202ENST00000624887 NIT1Q86X76 327 aa15.09■□□□□ 0.01
PCDHB11-202ENST00000624887 FAM19A2Q8N3H0 131 aa15.09■□□□□ 0.01
PCDHB11-202ENST00000624887 OR4X2Q8NGF9 303 aa15.09■□□□□ 0.01
PCDHB11-202ENST00000624887 CLEC5AQ9NY25 188 aa15.09■□□□□ 0.01
PCDHB11-202ENST00000624887 HSBP1O75506 76 aa15.09■□□□□ 0.01
PCDHB11-202ENST00000624887 RPS20P60866 119 aaKnown RBP15.09■□□□□ 0.01
PCDHB11-202ENST00000624887 SRSF2Q01130 221 aaKnown RBP15.09■□□□□ 0.01
PCDHB11-202ENST00000624887 TPPP3Q9BW30 176 aa15.09■□□□□ 0.01
PCDHB11-202ENST00000624887 TMSB15BA0A087X1C1 80 aa15.08■□□□□ 0
PCDHB11-202ENST00000624887 LYZL1Q6UWQ5 148 aa15.08■□□□□ 0
PCDHB11-202ENST00000624887 POLQO75417 2590 aa15.08■□□□□ 0
PCDHB11-202ENST00000624887 LINC00614P0C842 121 aa15.07■□□□□ 0
PCDHB11-202ENST00000624887 IGHV4-31P0DP07 118 aa15.07■□□□□ 0
PCDHB11-202ENST00000624887 ZNF25P17030 456 aaPredicted RBP15.07■□□□□ 0
PCDHB11-202ENST00000624887 NTF3P20783 257 aa15.07■□□□□ 0
PCDHB11-202ENST00000624887 KRTDAPP60985 99 aa15.07■□□□□ 0
PCDHB11-202ENST00000624887 HIST2H2BCQ6DN03 193 aa15.07■□□□□ 0
PCDHB11-202ENST00000624887 URB1-AS1Q96HZ7 61 aa15.07■□□□□ 0
PCDHB11-202ENST00000624887 FABP5P3A8MUU1 101 aa15.07■□□□□ 0
PCDHB11-202ENST00000624887 SMAD7O15105 426 aaKnown RBP15.07■□□□□ 0
PCDHB11-202ENST00000624887 FSHBP01225 129 aa15.07■□□□□ 0
PCDHB11-202ENST00000624887 RNASEKQ6P5S7 137 aaKnown RBP15.07■□□□□ 0
PCDHB11-202ENST00000624887 ZNF493Q6ZR52 646 aa15.07■□□□□ 0
PCDHB11-202ENST00000624887 LCNL1Q6ZST4 164 aa15.07■□□□□ 0
PCDHB11-202ENST00000624887 TMEM208Q9BTX3 173 aa15.07■□□□□ 0
PCDHB11-202ENST00000624887 AGPAT4-IT1Q9H0P7 198 aa15.07■□□□□ 0
PCDHB11-202ENST00000624887 G0S2P27469 103 aa15.06■□□□□ 0
PCDHB11-202ENST00000624887 NPFFR1Q9GZQ6 430 aa15.06■□□□□ 0
PCDHB11-202ENST00000624887 CENPEQ02224 2701 aa15.06■□□□□ 0
PCDHB11-202ENST00000624887 TENM4Q6N022 2769 aa15.06■□□□□ 0
PCDHB11-202ENST00000624887 C9orf139Q6ZV77 190 aa15.05■□□□□ 0
PCDHB11-202ENST00000624887 IL17RELQ6ZVW7 336 aa15.05■□□□□ 0
PCDHB11-202ENST00000624887 ZNF575Q86XF7 245 aa15.05■□□□□ 0
PCDHB11-202ENST00000624887 C16orf92Q96LL3 132 aa15.05■□□□□ 0
PCDHB11-202ENST00000624887 PTPN13Q12923 2485 aa15.05■□□□□ 0
PCDHB11-202ENST00000624887 CR1P17927 2039 aa15.05■□□□□ 0
PCDHB11-202ENST00000624887 TMEM95Q3KNT9 176 aa15.05■□□□□ -0
PCDHB11-202ENST00000624887 Q5PR19 223 aa15.05■□□□□ -0
PCDHB11-202ENST00000624887 ZNF705AQ6ZN79 300 aaPredicted RBP15.05■□□□□ -0
PCDHB11-202ENST00000624887 C9orf47Q6ZRZ4 202 aa15.05■□□□□ -0
PCDHB11-202ENST00000624887 Q8N976 141 aa15.05■□□□□ -0
PCDHB11-202ENST00000624887 M0R2Z0 102 aa15.04■□□□□ -0
PCDHB11-202ENST00000624887 CTRLP40313 264 aa15.04■□□□□ -0
PCDHB11-202ENST00000624887 ZNF138P52744 262 aa15.04■□□□□ -0
PCDHB11-202ENST00000624887 TMEM78Q5T7P6 136 aa15.04■□□□□ -0
PCDHB11-202ENST00000624887 CHCHD1Q96BP2 118 aaKnown RBP15.04■□□□□ -0
PCDHB11-202ENST00000624887 GOLT1BQ9Y3E0 138 aa15.04■□□□□ -0
PCDHB11-202ENST00000624887 C3orf79P0CE67 100 aa15.04■□□□□ -0
PCDHB11-202ENST00000624887 IGLC6P0CF74 106 aa15.04■□□□□ -0
PCDHB11-202ENST00000624887 PSMB8P28062 276 aa15.04■□□□□ -0
PCDHB11-202ENST00000624887 GPHB5Q86YW7 130 aa15.04■□□□□ -0
PCDHB11-202ENST00000624887 FER1L6-AS1Q8NA97 138 aa15.04■□□□□ -0
PCDHB11-202ENST00000624887 ORM1P02763 201 aa15.03■□□□□ -0
PCDHB11-202ENST00000624887 LINC01559Q495D7 138 aa15.03■□□□□ -0
PCDHB11-202ENST00000624887 DMRTA1Q5VZB9 504 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms