RNA–Protein interactions for RNA: ENST00000624354.3

VCL-207, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 3,307 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-207ENST00000624354 PSG8Q9UQ74 426 aa6.87□□□□□ -1.31
VCL-207ENST00000624354 F8W1H4 67 aa6.87□□□□□ -1.31
VCL-207ENST00000624354 BUB1B-PAK6H3BSN5 160 aa6.87□□□□□ -1.31
VCL-207ENST00000624354 IGKV1-17P01599 117 aa6.87□□□□□ -1.31
VCL-207ENST00000624354 GCSHP23434 173 aa6.87□□□□□ -1.31
VCL-207ENST00000624354 NMUP48645 174 aa6.87□□□□□ -1.31
VCL-207ENST00000624354 DLX1P56177 255 aa6.87□□□□□ -1.31
VCL-207ENST00000624354 LY6DQ14210 128 aa6.87□□□□□ -1.31
VCL-207ENST00000624354 Q71RC1 249 aaPredicted RBP6.87□□□□□ -1.31
VCL-207ENST00000624354 LYPD1Q8N2G4 141 aa6.87□□□□□ -1.31
VCL-207ENST00000624354 RPEQ96AT9 228 aa6.87□□□□□ -1.31
VCL-207ENST00000624354 SPAG8Q99932 426 aaPredicted RBP6.87□□□□□ -1.31
VCL-207ENST00000624354 SHANK2-AS3Q9BTD1 123 aa6.87□□□□□ -1.31
VCL-207ENST00000624354 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.86□□□□□ -1.31
VCL-207ENST00000624354 CT45A10P0DMU9 189 aa6.86□□□□□ -1.31
VCL-207ENST00000624354 PRB3Q04118 309 aaPredicted RBP6.86□□□□□ -1.31
VCL-207ENST00000624354 CSMD2Q7Z408 3487 aa6.86□□□□□ -1.31
VCL-207ENST00000624354 ANKHD1Q8IWZ3 2542 aaKnown RBP6.86□□□□□ -1.31
VCL-207ENST00000624354 ZNF785A8K8V0 405 aa6.86□□□□□ -1.31
VCL-207ENST00000624354 OVOL3O00110 214 aa6.86□□□□□ -1.31
VCL-207ENST00000624354 CNIH1O95406 144 aa6.86□□□□□ -1.31
VCL-207ENST00000624354 SIGLEC15Q6ZMC9 328 aa6.86□□□□□ -1.31
VCL-207ENST00000624354 GATD1Q8NB37 220 aa6.86□□□□□ -1.31
VCL-207ENST00000624354 C17orf77Q96MU5 243 aa6.86□□□□□ -1.31
VCL-207ENST00000624354 MRPL16Q9NX20 251 aaKnown RBP6.86□□□□□ -1.31
VCL-207ENST00000624354 TLN2Q9Y4G6 2542 aa6.86□□□□□ -1.31
VCL-207ENST00000624354 H3BRN7 92 aa6.86□□□□□ -1.31
VCL-207ENST00000624354 ASCL2Q99929 193 aa6.86□□□□□ -1.31
VCL-207ENST00000624354 COX7A1P24310 79 aa6.85□□□□□ -1.31
VCL-207ENST00000624354 LGALS9BQ3B8N2 356 aa6.85□□□□□ -1.31
VCL-207ENST00000624354 ETDBQ3ZM63 59 aa6.85□□□□□ -1.31
VCL-207ENST00000624354 LGALS9CQ6DKI2 356 aa6.85□□□□□ -1.31
VCL-207ENST00000624354 SH2D6Q7Z4S9 175 aa6.85□□□□□ -1.31
VCL-207ENST00000624354 PCP2Q8IVA1 136 aa6.85□□□□□ -1.31
VCL-207ENST00000624354 BCL6BQ8N143 479 aaPredicted RBP6.85□□□□□ -1.31
VCL-207ENST00000624354 SRSF8Q9BRL6 282 aaKnown RBP6.85□□□□□ -1.31
VCL-207ENST00000624354 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.85□□□□□ -1.315e-7■■■■□ 21.9
VCL-207ENST00000624354 A0A1W2PRD5 423 aa6.85□□□□□ -1.31
VCL-207ENST00000624354 A0A1W2PRF3 423 aa6.85□□□□□ -1.31
VCL-207ENST00000624354 A0A1W2PRM7 423 aa6.85□□□□□ -1.31
VCL-207ENST00000624354 IL4P05112 153 aa6.85□□□□□ -1.31
VCL-207ENST00000624354 CACNG7P62955 275 aa6.85□□□□□ -1.31
VCL-207ENST00000624354 C5orf64Q2M2E5 130 aa6.85□□□□□ -1.31
VCL-207ENST00000624354 RNF125Q96EQ8 232 aa6.85□□□□□ -1.31
VCL-207ENST00000624354 RNF5Q99942 180 aa6.85□□□□□ -1.31
VCL-207ENST00000624354 K7EIM0 57 aa6.84□□□□□ -1.31
VCL-207ENST00000624354 CRIP1P50238 77 aa6.84□□□□□ -1.31
VCL-207ENST00000624354 ATP5G2Q06055 141 aa6.84□□□□□ -1.31
VCL-207ENST00000624354 ZNF491Q8N8L2 437 aa6.84□□□□□ -1.31
VCL-207ENST00000624354 AAMDCQ9H7C9 122 aa6.84□□□□□ -1.31
VCL-207ENST00000624354 SIGLEC8Q9NYZ4 499 aa6.84□□□□□ -1.31
VCL-207ENST00000624354 USP9YO00507 2555 aaPredicted RBP6.84□□□□□ -1.31
VCL-207ENST00000624354 M0R3E3 92 aa6.84□□□□□ -1.31
VCL-207ENST00000624354 IFI27P40305 119 aaPredicted RBP6.84□□□□□ -1.31
VCL-207ENST00000624354 FXYD2P54710 66 aa6.84□□□□□ -1.31
VCL-207ENST00000624354 ZNF493Q6ZR52 646 aa6.84□□□□□ -1.31
VCL-207ENST00000624354 ARPC1AQ92747 370 aa6.84□□□□□ -1.31
VCL-207ENST00000624354 E7EQL1 145 aa6.84□□□□□ -1.31
VCL-207ENST00000624354 K7ERJ3 54 aa6.84□□□□□ -1.31
VCL-207ENST00000624354 PIP4P2Q8N4L2 257 aa6.84□□□□□ -1.31
VCL-207ENST00000624354 ZNF414Q96IQ9 312 aa6.84□□□□□ -1.31
VCL-207ENST00000624354 LOC389332A0A1B0GUA5 103 aa6.83□□□□□ -1.32
VCL-207ENST00000624354 D6R8Y8 96 aa6.83□□□□□ -1.32
VCL-207ENST00000624354 CSPG4Q6UVK1 2322 aa6.83□□□□□ -1.32
VCL-207ENST00000624354 DOPEY2Q9Y3R5 2298 aa6.83□□□□□ -1.32
VCL-207ENST00000624354 SHISA9B4DS77 424 aa6.83□□□□□ -1.32
VCL-207ENST00000624354 PDE6HQ13956 83 aa6.83□□□□□ -1.32
VCL-207ENST00000624354 LYZL1Q6UWQ5 148 aa6.83□□□□□ -1.32
VCL-207ENST00000624354 ORMDL3Q8N138 153 aa6.83□□□□□ -1.32
VCL-207ENST00000624354 ZNF418Q8TF45 676 aaPredicted RBP6.83□□□□□ -1.32
VCL-207ENST00000624354 PRELID3AQ96N28 172 aa6.83□□□□□ -1.32
VCL-207ENST00000624354 C8orf49Q96NF6 230 aa6.83□□□□□ -1.32
VCL-207ENST00000624354 NHP2Q9NX24 153 aaKnown RBP6.83□□□□□ -1.32
VCL-207ENST00000624354 TMSB15BA0A087X1C1 80 aa6.83□□□□□ -1.32
VCL-207ENST00000624354 FAM106CPP0CH98 169 aa6.83□□□□□ -1.32
VCL-207ENST00000624354 FAM106AQ4KMX7 169 aa6.83□□□□□ -1.32
VCL-207ENST00000624354 FAM104BQ5XKR9 115 aa6.83□□□□□ -1.32
VCL-207ENST00000624354 C18orf15Q96N68 181 aa6.83□□□□□ -1.32
VCL-207ENST00000624354 RAB1BQ9H0U4 201 aa6.83□□□□□ -1.32
VCL-207ENST00000624354 H3BMG7 143 aa6.82□□□□□ -1.32
VCL-207ENST00000624354 MRPS12O15235 138 aaKnown RBP6.82□□□□□ -1.32
VCL-207ENST00000624354 TSPAN13O95857 204 aa6.82□□□□□ -1.32
VCL-207ENST00000624354 GAGE13Q4V321 117 aa6.82□□□□□ -1.32
VCL-207ENST00000624354 GFRALQ6UXV0 394 aa6.82□□□□□ -1.32
VCL-207ENST00000624354 AMN1Q8IY45 258 aa6.82□□□□□ -1.32
VCL-207ENST00000624354 CYSLTR1Q9Y271 337 aa6.82□□□□□ -1.32
VCL-207ENST00000624354 A0A096LNJ9 63 aa6.82□□□□□ -1.32
VCL-207ENST00000624354 TMEM213A2RRL7 107 aa6.82□□□□□ -1.32
VCL-207ENST00000624354 B9A039 149 aa6.82□□□□□ -1.32
VCL-207ENST00000624354 TIMM23O14925 209 aa6.82□□□□□ -1.32
VCL-207ENST00000624354 SPINK8P0C7L1 97 aa6.82□□□□□ -1.32
VCL-207ENST00000624354 LOXL1Q08397 574 aaPredicted RBP6.82□□□□□ -1.32
VCL-207ENST00000624354 WI2-2373I1.2A0A1W2PRP0 233 aa6.81□□□□□ -1.32
VCL-207ENST00000624354 OR11H12B2RN74 326 aa6.81□□□□□ -1.32
VCL-207ENST00000624354 E9PLD3 99 aa6.81□□□□□ -1.32
VCL-207ENST00000624354 LYNX1G3V0Z9 82 aa6.81□□□□□ -1.32
VCL-207ENST00000624354 LYNX1P0DP58 116 aa6.81□□□□□ -1.32
VCL-207ENST00000624354 C8orf86Q6ZUL3 223 aa6.81□□□□□ -1.32
VCL-207ENST00000624354 TTC9CQ8N5M4 171 aa6.81□□□□□ -1.32
VCL-207ENST00000624354 OR11H1Q8NG94 326 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms