RNA–Protein interactions for RNA: ENST00000621399.1

CIRBP-245, Transcript of cold inducible RNA binding protein, humanhuman

TSL 1 (best)

Gene CIRBP, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-245ENST00000621399 CRXO43186 299 aaPredicted RBP13.48□□□□□ -0.25
CIRBP-245ENST00000621399 SLC25A5P05141 298 aaKnown RBP13.48□□□□□ -0.25
CIRBP-245ENST00000621399 LEPP41159 167 aa13.48□□□□□ -0.25
CIRBP-245ENST00000621399 UBE2G2P60604 165 aa13.48□□□□□ -0.25
CIRBP-245ENST00000621399 ODF3Q96PU9 254 aa13.48□□□□□ -0.25
CIRBP-245ENST00000621399 BOLA1Q9Y3E2 137 aa13.48□□□□□ -0.25
CIRBP-245ENST00000621399 X6R8D5 127 aa13.48□□□□□ -0.25
CIRBP-245ENST00000621399 A0A0J9YWU9 116 aa13.47□□□□□ -0.25
CIRBP-245ENST00000621399 A0A1B0GV50 99 aa13.47□□□□□ -0.25
CIRBP-245ENST00000621399 A0A1W2PRE2 83 aa13.47□□□□□ -0.25
CIRBP-245ENST00000621399 SULT1A2P50226 295 aa13.47□□□□□ -0.25
CIRBP-245ENST00000621399 SUMO1P63165 101 aaKnown RBP13.47□□□□□ -0.25
CIRBP-245ENST00000621399 GNG5P63218 68 aa13.47□□□□□ -0.25
CIRBP-245ENST00000621399 ZNF705AQ6ZN79 300 aaPredicted RBP13.47□□□□□ -0.25
CIRBP-245ENST00000621399 C1orf158Q8N1D5 194 aa13.47□□□□□ -0.25
CIRBP-245ENST00000621399 ARL6IP6Q8N6S5 226 aa13.47□□□□□ -0.25
CIRBP-245ENST00000621399 TMEM208Q9BTX3 173 aa13.47□□□□□ -0.25
CIRBP-245ENST00000621399 YTHDF2Q9Y5A9 579 aaKnown RBP13.47□□□□□ -0.25
CIRBP-245ENST00000621399 GGTLC3B5MD39 225 aa13.46□□□□□ -0.25
CIRBP-245ENST00000621399 J3KRW8 73 aa13.46□□□□□ -0.25
CIRBP-245ENST00000621399 MIFP14174 115 aa13.46□□□□□ -0.25
CIRBP-245ENST00000621399 ZNF138P52744 262 aa13.46□□□□□ -0.25
CIRBP-245ENST00000621399 GOLT1AQ6ZVE7 132 aa13.46□□□□□ -0.25
CIRBP-245ENST00000621399 C5orf17Q8NAS9 161 aa13.46□□□□□ -0.25
CIRBP-245ENST00000621399 IGHV4-28A0A0C4DH34 117 aa13.45□□□□□ -0.26
CIRBP-245ENST00000621399 ZNF492Q9P255 531 aa13.45□□□□□ -0.26
CIRBP-245ENST00000621399 FAM74A7A6NL05 159 aa13.44□□□□□ -0.26
CIRBP-245ENST00000621399 DEFB4AO15263 64 aa13.44□□□□□ -0.26
CIRBP-245ENST00000621399 IFNA7P01567 189 aa13.44□□□□□ -0.26
CIRBP-245ENST00000621399 KIR3DS1Q14943 382 aa13.44□□□□□ -0.26
CIRBP-245ENST00000621399 Q8NAQ8 132 aa13.44□□□□□ -0.26
CIRBP-245ENST00000621399 Q8TAT8 98 aa13.44□□□□□ -0.26
CIRBP-245ENST00000621399 FAM19A4Q96LR4 140 aa13.44□□□□□ -0.26
CIRBP-245ENST00000621399 NEU1Q99519 415 aa13.44□□□□□ -0.26
CIRBP-245ENST00000621399 NKX6-2Q9C056 277 aaPredicted RBP13.44□□□□□ -0.26
CIRBP-245ENST00000621399 EPDR1Q9UM22 224 aa13.44□□□□□ -0.26
CIRBP-245ENST00000621399 SERTM2A0A1B0GWG4 89 aa13.43□□□□□ -0.26
CIRBP-245ENST00000621399 SMIM9A6NGZ8 99 aa13.43□□□□□ -0.26
CIRBP-245ENST00000621399 K7EQM0 130 aa13.43□□□□□ -0.26
CIRBP-245ENST00000621399 TCRAP04437 139 aa13.43□□□□□ -0.26
CIRBP-245ENST00000621399 GFI1BQ5VTD9 330 aa13.43□□□□□ -0.26
CIRBP-245ENST00000621399 ALKAL2Q6UX46 152 aa13.43□□□□□ -0.26
CIRBP-245ENST00000621399 LINC01587Q99440 93 aa13.43□□□□□ -0.26
CIRBP-245ENST00000621399 TEX46H3BTG2 121 aa13.42□□□□□ -0.26
CIRBP-245ENST00000621399 HBE1P02100 147 aa13.42□□□□□ -0.26
CIRBP-245ENST00000621399 GPX1P07203 203 aa13.42□□□□□ -0.26
CIRBP-245ENST00000621399 NMBP08949 121 aa13.42□□□□□ -0.26
CIRBP-245ENST00000621399 RBMY1A1P0DJD3 496 aaKnown RBP13.42□□□□□ -0.26
CIRBP-245ENST00000621399 RBMY1CP0DJD4 496 aa13.42□□□□□ -0.26
CIRBP-245ENST00000621399 RBMY1FQ15415 496 aaKnown RBP13.42□□□□□ -0.26
CIRBP-245ENST00000621399 CST9LP1Q5W188 147 aa13.42□□□□□ -0.26
CIRBP-245ENST00000621399 TMEM256Q8N2U0 113 aa13.42□□□□□ -0.26
CIRBP-245ENST00000621399 C11orf68Q9H3H3 251 aaKnown RBP13.42□□□□□ -0.26
CIRBP-245ENST00000621399 TRAV8-1A0A0A6YYK1 113 aa13.41□□□□□ -0.26
CIRBP-245ENST00000621399 TRAV1-1A0A0B4J248 108 aa13.41□□□□□ -0.26
CIRBP-245ENST00000621399 TRAV12-3A0A0B4J271 114 aa13.41□□□□□ -0.26
CIRBP-245ENST00000621399 TRBV7-9A0A0J9YWB2 115 aa13.41□□□□□ -0.26
CIRBP-245ENST00000621399 PAGE4O60829 102 aa13.41□□□□□ -0.26
CIRBP-245ENST00000621399 CRISP2P16562 243 aa13.41□□□□□ -0.26
CIRBP-245ENST00000621399 RNASE4P34096 147 aaKnown RBP13.41□□□□□ -0.26
CIRBP-245ENST00000621399 PPT1P50897 306 aa13.41□□□□□ -0.26
CIRBP-245ENST00000621399 C20orf144Q9BQM9 153 aa13.41□□□□□ -0.26
CIRBP-245ENST00000621399 ATG101Q9BSB4 218 aa13.41□□□□□ -0.26
CIRBP-245ENST00000621399 C7orf71A4D174 169 aa13.4□□□□□ -0.26
CIRBP-245ENST00000621399 ZNF705GA8MUZ8 300 aaPredicted RBP13.4□□□□□ -0.26
CIRBP-245ENST00000621399 KLLNB2CW77 178 aa13.4□□□□□ -0.26
CIRBP-245ENST00000621399 H7BYZ3 331 aa13.4□□□□□ -0.26
CIRBP-245ENST00000621399 CCL20P78556 96 aa13.4□□□□□ -0.26
CIRBP-245ENST00000621399 RRN3P1Q2M238 152 aa13.4□□□□□ -0.26
CIRBP-245ENST00000621399 ZFAND2AQ8N6M9 145 aa13.4□□□□□ -0.26
CIRBP-245ENST00000621399 CYB561D1Q8N8Q1 229 aa13.4□□□□□ -0.26
CIRBP-245ENST00000621399 SGK494Q96LW2 274 aa13.4□□□□□ -0.26
CIRBP-245ENST00000621399 NIPSNAP3BQ9BS92 247 aa13.4□□□□□ -0.26
CIRBP-245ENST00000621399 LENEPQ9Y5L5 61 aa13.4□□□□□ -0.26
CIRBP-245ENST00000621399 ARL2-SNX15V9GYD0 113 aa13.4□□□□□ -0.26
CIRBP-245ENST00000621399 HTN1P15515 57 aa13.39□□□□□ -0.27
CIRBP-245ENST00000621399 BTN1A1Q13410 526 aa13.39□□□□□ -0.27
CIRBP-245ENST00000621399 IL17DQ8TAD2 202 aa13.39□□□□□ -0.27
CIRBP-245ENST00000621399 MUC7Q8TAX7 377 aa13.39□□□□□ -0.27
CIRBP-245ENST00000621399 LOC102723971A0A1B0GUV8 181 aa13.38□□□□□ -0.27
CIRBP-245ENST00000621399 PEX7O00628 323 aa13.38□□□□□ -0.27
CIRBP-245ENST00000621399 PRM2P04554 102 aa13.38□□□□□ -0.27
CIRBP-245ENST00000621399 ATP5G3P48201 142 aa13.38□□□□□ -0.27
CIRBP-245ENST00000621399 EMP1P54849 157 aa13.38□□□□□ -0.27
CIRBP-245ENST00000621399 TAS2R60P59551 318 aa13.38□□□□□ -0.27
CIRBP-245ENST00000621399 CCDC28AQ8IWP9 274 aa13.38□□□□□ -0.27
CIRBP-245ENST00000621399 HIST1H2BAQ96A08 127 aa13.38□□□□□ -0.27
CIRBP-245ENST00000621399 GNG13Q9P2W3 67 aa13.38□□□□□ -0.27
CIRBP-245ENST00000621399 PSG8Q9UQ74 426 aa13.38□□□□□ -0.27
CIRBP-245ENST00000621399 TMEM189A5PLL7 270 aa13.37□□□□□ -0.27
CIRBP-245ENST00000621399 F6UZH7 168 aa13.37□□□□□ -0.27
CIRBP-245ENST00000621399 PRR9Q5T870 116 aa13.37□□□□□ -0.27
CIRBP-245ENST00000621399 TMEM75Q8N9X5 138 aa13.37□□□□□ -0.27
CIRBP-245ENST00000621399 C11orf45Q8TAV5 145 aa13.37□□□□□ -0.27
CIRBP-245ENST00000621399 LINC00479Q96M42 142 aa13.37□□□□□ -0.27
CIRBP-245ENST00000621399 TCEAL7Q9BRU2 100 aa13.37□□□□□ -0.27
CIRBP-245ENST00000621399 NDFIP1Q9BT67 221 aa13.37□□□□□ -0.27
CIRBP-245ENST00000621399 TREM1Q9NP99 234 aa13.37□□□□□ -0.27
CIRBP-245ENST00000621399 FBLL1A6NHQ2 334 aaKnown RBP13.36□□□□□ -0.27
CIRBP-245ENST00000621399 ZNF324O75467 553 aaPredicted RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms