RNA–Protein interactions for RNA: ENST00000618939.4

CNOT3-210, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 5

Gene CNOT3, Length 4,516 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-210ENST00000618939 CACNA1AO00555 2505 aa10.99□□□□□ -0.65
CNOT3-210ENST00000618939 SMAGPQ0VAQ4 97 aa10.99□□□□□ -0.65
CNOT3-210ENST00000618939 RUSC1-AS1Q66K80 236 aa10.99□□□□□ -0.65
CNOT3-210ENST00000618939 C1orf229Q6ZS94 237 aaPredicted RBP10.99□□□□□ -0.65
CNOT3-210ENST00000618939 FRMD6-AS1P0C7T7 363 aa10.99□□□□□ -0.65
CNOT3-210ENST00000618939 PLXNB1O43157 2135 aa10.99□□□□□ -0.65
CNOT3-210ENST00000618939 I3L2K1 104 aa10.99□□□□□ -0.65
CNOT3-210ENST00000618939 UBE2V1Q13404 147 aa10.99□□□□□ -0.65
CNOT3-210ENST00000618939 DUX3Q96PT4 197 aa10.99□□□□□ -0.65
CNOT3-210ENST00000618939 GEMIN7Q9H840 131 aaKnown RBP10.99□□□□□ -0.65
CNOT3-210ENST00000618939 K7EIM0 57 aa10.98□□□□□ -0.65
CNOT3-210ENST00000618939 IGLV1-47P01700 117 aa10.98□□□□□ -0.65
CNOT3-210ENST00000618939 MRPL51Q4U2R6 128 aaKnown RBP10.98□□□□□ -0.65
CNOT3-210ENST00000618939 STPG4Q8N801 248 aa10.98□□□□□ -0.65
CNOT3-210ENST00000618939 OR11H6Q8NGC7 330 aa10.98□□□□□ -0.65
CNOT3-210ENST00000618939 IGFBPL1Q8WX77 278 aa10.98□□□□□ -0.65
CNOT3-210ENST00000618939 DPH3P1Q9H4G8 78 aa10.98□□□□□ -0.65
CNOT3-210ENST00000618939 COL5A1P20908 1838 aaPredicted RBP10.98□□□□□ -0.65
CNOT3-210ENST00000618939 B4DSR2 109 aa10.98□□□□□ -0.65
CNOT3-210ENST00000618939 DUSP14O95147 198 aaKnown RBP10.98□□□□□ -0.65
CNOT3-210ENST00000618939 KLF5Q13887 457 aaPredicted RBP10.98□□□□□ -0.65
CNOT3-210ENST00000618939 ZC2HC1BQ5TFG8 222 aa10.98□□□□□ -0.65
CNOT3-210ENST00000618939 IL17RELQ6ZVW7 336 aa10.98□□□□□ -0.65
CNOT3-210ENST00000618939 ARL6IP6Q8N6S5 226 aa10.98□□□□□ -0.65
CNOT3-210ENST00000618939 NAA38Q9BRA0 125 aaKnown RBP10.98□□□□□ -0.65
CNOT3-210ENST00000618939 LINC00574Q9H8X3 128 aa10.98□□□□□ -0.65
CNOT3-210ENST00000618939 TLN1Q9Y490 2541 aaKnown RBP10.98□□□□□ -0.65
CNOT3-210ENST00000618939 APOMO95445 188 aa10.98□□□□□ -0.65
CNOT3-210ENST00000618939 COX6CP09669 75 aa10.98□□□□□ -0.65
CNOT3-210ENST00000618939 C14orf178Q8N769 122 aaPredicted RBP10.98□□□□□ -0.65
CNOT3-210ENST00000618939 ZNF503Q96F45 646 aa10.98□□□□□ -0.65
CNOT3-210ENST00000618939 JMJD8Q96S16 334 aa10.98□□□□□ -0.65
CNOT3-210ENST00000618939 RHPN1-AS1Q9BWJ2 59 aa10.98□□□□□ -0.65
CNOT3-210ENST00000618939 COX11Q9Y6N1 276 aa10.98□□□□□ -0.65
CNOT3-210ENST00000618939 ZNF688P0C7X2 276 aa10.97□□□□□ -0.65
CNOT3-210ENST00000618939 NDUFS7O75251 213 aa10.97□□□□□ -0.65
CNOT3-210ENST00000618939 ATG2AQ2TAZ0 1938 aa10.97□□□□□ -0.65
CNOT3-210ENST00000618939 C22orf34Q6ZV56 151 aa10.97□□□□□ -0.65
CNOT3-210ENST00000618939 BCL6BQ8N143 479 aaPredicted RBP10.97□□□□□ -0.65
CNOT3-210ENST00000618939 VGLL1Q99990 258 aa10.97□□□□□ -0.65
CNOT3-210ENST00000618939 TDRG1Q3Y452 100 aa10.97□□□□□ -0.65
CNOT3-210ENST00000618939 PRSS57Q6UWY2 283 aa10.97□□□□□ -0.65
CNOT3-210ENST00000618939 ITLN2Q8WWU7 325 aaPredicted RBP10.97□□□□□ -0.65
CNOT3-210ENST00000618939 C1orf122Q6ZSJ8 110 aa10.96□□□□□ -0.65
CNOT3-210ENST00000618939 OVOL3O00110 214 aa10.96□□□□□ -0.65
CNOT3-210ENST00000618939 FCN3O75636 299 aa10.96□□□□□ -0.65
CNOT3-210ENST00000618939 MAJINQ3KP22 176 aa10.96□□□□□ -0.65
CNOT3-210ENST00000618939 SIGLEC8Q9NYZ4 499 aa10.96□□□□□ -0.65
CNOT3-210ENST00000618939 CD5LO43866 347 aa10.96□□□□□ -0.66
CNOT3-210ENST00000618939 SMAD7O15105 426 aaKnown RBP10.96□□□□□ -0.66
CNOT3-210ENST00000618939 RRN3P1Q2M238 152 aa10.96□□□□□ -0.66
CNOT3-210ENST00000618939 C8orf86Q6ZUL3 223 aa10.96□□□□□ -0.66
CNOT3-210ENST00000618939 IGHV1-69DA0A0B4J2H0 117 aa10.95□□□□□ -0.66
CNOT3-210ENST00000618939 ZNF815PA8K554 130 aa10.95□□□□□ -0.66
CNOT3-210ENST00000618939 IGHV1-69P01742 117 aa10.95□□□□□ -0.66
CNOT3-210ENST00000618939 DSCR9P59020 149 aa10.95□□□□□ -0.66
CNOT3-210ENST00000618939 C19orf54Q5BKX5 351 aa10.95□□□□□ -0.66
CNOT3-210ENST00000618939 TEX22C9J3V5 150 aa10.95□□□□□ -0.66
CNOT3-210ENST00000618939 OR5A1Q8NGJ0 315 aa10.95□□□□□ -0.66
CNOT3-210ENST00000618939 HCFC1P51610 2035 aa10.95□□□□□ -0.66
CNOT3-210ENST00000618939 A0A1B0GWB2 263 aa10.94□□□□□ -0.66
CNOT3-210ENST00000618939 HLA-DMBP28068 263 aa10.94□□□□□ -0.66
CNOT3-210ENST00000618939 CD300EQ496F6 205 aaPredicted RBP10.94□□□□□ -0.66
CNOT3-210ENST00000618939 DAZ1Q9NQZ3 744 aaKnown RBP10.94□□□□□ -0.66
CNOT3-210ENST00000618939 TRAV12-3A0A0B4J271 114 aa10.94□□□□□ -0.66
CNOT3-210ENST00000618939 NPSP0C0P6 89 aa10.94□□□□□ -0.66
CNOT3-210ENST00000618939 LINC01587Q99440 93 aa10.94□□□□□ -0.66
CNOT3-210ENST00000618939 VCX2Q9H322 139 aa10.94□□□□□ -0.66
CNOT3-210ENST00000618939 KLF12Q9Y4X4 402 aa10.94□□□□□ -0.66
CNOT3-210ENST00000618939 NPYP01303 97 aa10.94□□□□□ -0.66
CNOT3-210ENST00000618939 FAM120AOSQ5T036 256 aa10.94□□□□□ -0.66
CNOT3-210ENST00000618939 SAMD5Q5TGI4 173 aa10.94□□□□□ -0.66
CNOT3-210ENST00000618939 HTTP42858 3142 aa10.94□□□□□ -0.66
CNOT3-210ENST00000618939 LINC01549A6NIU2 74 aa10.94□□□□□ -0.66
CNOT3-210ENST00000618939 UBE2L6O14933 153 aa10.94□□□□□ -0.66
CNOT3-210ENST00000618939 PLNP26678 52 aa10.94□□□□□ -0.66
CNOT3-210ENST00000618939 Q8NA96 180 aa10.94□□□□□ -0.66
CNOT3-210ENST00000618939 PEMTQ9UBM1 199 aa10.94□□□□□ -0.66
CNOT3-210ENST00000618939 IGKV1D-37A0A075B6S9 117 aa10.93□□□□□ -0.66
CNOT3-210ENST00000618939 SNCGO76070 127 aa10.93□□□□□ -0.66
CNOT3-210ENST00000618939 CRYGCP07315 174 aa10.93□□□□□ -0.66
CNOT3-210ENST00000618939 EXPH5Q8NEV8 1989 aa10.93□□□□□ -0.66
CNOT3-210ENST00000618939 CIRBPQ14011 172 aaKnown RBP10.93□□□□□ -0.66
CNOT3-210ENST00000618939 NPBQ8NG41 125 aa10.93□□□□□ -0.66
CNOT3-210ENST00000618939 ZNF479Q96JC4 524 aa10.93□□□□□ -0.66
CNOT3-210ENST00000618939 IGLV11-55A0A075B6I3 123 aa10.93□□□□□ -0.66
CNOT3-210ENST00000618939 PSMB11A5LHX3 300 aa10.93□□□□□ -0.66
CNOT3-210ENST00000618939 KIR3DS1Q14943 382 aa10.93□□□□□ -0.66
CNOT3-210ENST00000618939 HOXB4P17483 251 aaPredicted RBP10.92□□□□□ -0.66
CNOT3-210ENST00000618939 BEX4Q9NWD9 120 aaPredicted RBP10.92□□□□□ -0.66
CNOT3-210ENST00000618939 IGF2RP11717 2491 aa10.92□□□□□ -0.66
CNOT3-210ENST00000618939 TRGV11A0A075B6L2 103 aa10.92□□□□□ -0.66
CNOT3-210ENST00000618939 ESDP10768 282 aa10.92□□□□□ -0.66
CNOT3-210ENST00000618939 DEFB104AQ8WTQ1 72 aa10.92□□□□□ -0.66
CNOT3-210ENST00000618939 GTSF1Q8WW33 167 aa10.92□□□□□ -0.66
CNOT3-210ENST00000618939 CSTL1Q9H114 145 aa10.92□□□□□ -0.66
CNOT3-210ENST00000618939 NDUFS8O00217 210 aa10.92□□□□□ -0.66
CNOT3-210ENST00000618939 MSMBP08118 114 aa10.92□□□□□ -0.66
CNOT3-210ENST00000618939 EGR2P11161 476 aaPredicted RBP10.92□□□□□ -0.66
CNOT3-210ENST00000618939 LGALS9BQ3B8N2 356 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms