RNA–Protein interactions for RNA: ENST00000617172.4

TARDBP-218, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-218ENST00000617172 MED14OSP0DP75 135 aa6.77□□□□□ -1.33
TARDBP-218ENST00000617172 PYYP10082 97 aa6.77□□□□□ -1.33
TARDBP-218ENST00000617172 ICAM4Q14773 271 aa6.77□□□□□ -1.33
TARDBP-218ENST00000617172 ANXA2RQ3ZCQ2 193 aa6.77□□□□□ -1.33
TARDBP-218ENST00000617172 LRRC37A5PQ49AS3 106 aa6.77□□□□□ -1.33
TARDBP-218ENST00000617172 GCSAMLQ5JQS6 135 aa6.77□□□□□ -1.33
TARDBP-218ENST00000617172 TMEM78Q5T7P6 136 aa6.77□□□□□ -1.33
TARDBP-218ENST00000617172 LYPD1Q8N2G4 141 aa6.77□□□□□ -1.33
TARDBP-218ENST00000617172 RXFP4Q8TDU9 374 aa6.77□□□□□ -1.33
TARDBP-218ENST00000617172 RNF141Q8WVD5 230 aa6.77□□□□□ -1.33
TARDBP-218ENST00000617172 PPP1R1CQ8WVI7 109 aa6.77□□□□□ -1.33
TARDBP-218ENST00000617172 SLC25A2Q9BXI2 301 aa6.77□□□□□ -1.33
TARDBP-218ENST00000617172 AGPAT4-IT1Q9H0P7 198 aa6.77□□□□□ -1.33
TARDBP-218ENST00000617172 OR5AC2Q9NZP5 309 aa6.77□□□□□ -1.33
TARDBP-218ENST00000617172 VPS13DQ5THJ4 4388 aa6.76□□□□□ -1.33
TARDBP-218ENST00000617172 TRAV26-1A0A087WT03 109 aa6.76□□□□□ -1.33
TARDBP-218ENST00000617172 TRBV7-9A0A0J9YWB2 115 aa6.76□□□□□ -1.33
TARDBP-218ENST00000617172 NBDYA0A0U1RRE5 68 aa6.76□□□□□ -1.33
TARDBP-218ENST00000617172 GAGE12BA1L429 117 aa6.76□□□□□ -1.33
TARDBP-218ENST00000617172 H0YIZ8 118 aa6.76□□□□□ -1.33
TARDBP-218ENST00000617172 SSNA1O43805 119 aa6.76□□□□□ -1.33
TARDBP-218ENST00000617172 GAGE7O76087 117 aa6.76□□□□□ -1.33
TARDBP-218ENST00000617172 IFNA5P01569 189 aa6.76□□□□□ -1.33
TARDBP-218ENST00000617172 GAGE12FP0CL80 117 aa6.76□□□□□ -1.33
TARDBP-218ENST00000617172 GAGE12GP0CL81 117 aa6.76□□□□□ -1.33
TARDBP-218ENST00000617172 GAGE12IP0CL82 117 aa6.76□□□□□ -1.33
TARDBP-218ENST00000617172 CRISP2P16562 243 aa6.76□□□□□ -1.33
TARDBP-218ENST00000617172 RNASE4P34096 147 aaKnown RBP6.76□□□□□ -1.33
TARDBP-218ENST00000617172 CSN1S1P47710 185 aa6.76□□□□□ -1.33
TARDBP-218ENST00000617172 H2BFSP57053 126 aa6.76□□□□□ -1.33
TARDBP-218ENST00000617172 IFITM3Q01628 133 aa6.76□□□□□ -1.33
TARDBP-218ENST00000617172 ERCC8Q13216 396 aa6.76□□□□□ -1.33
TARDBP-218ENST00000617172 EXOC3-AS1Q8N2X6 119 aa6.76□□□□□ -1.33
TARDBP-218ENST00000617172 EIF4E3Q8N5X7 224 aaKnown RBP6.76□□□□□ -1.33
TARDBP-218ENST00000617172 ZNRF2Q8NHG8 242 aa6.76□□□□□ -1.33
TARDBP-218ENST00000617172 SCGB1C1Q8TD33 95 aa6.76□□□□□ -1.33
TARDBP-218ENST00000617172 FAM167A-AS1Q96KT0 104 aa6.76□□□□□ -1.33
TARDBP-218ENST00000617172 FAM19A4Q96LR4 140 aa6.76□□□□□ -1.33
TARDBP-218ENST00000617172 C18orf15Q96N68 181 aa6.76□□□□□ -1.33
TARDBP-218ENST00000617172 PAXXQ9BUH6 204 aa6.76□□□□□ -1.33
TARDBP-218ENST00000617172 FUT9Q9Y231 359 aa6.76□□□□□ -1.33
TARDBP-218ENST00000617172 TRGV2A0A075B6R0 118 aa6.75□□□□□ -1.33
TARDBP-218ENST00000617172 TAS2R45P59539 299 aa6.75□□□□□ -1.33
TARDBP-218ENST00000617172 FAM122CQ6P4D5 195 aa6.75□□□□□ -1.33
TARDBP-218ENST00000617172 MIR17HGQ75NE6 70 aa6.75□□□□□ -1.33
TARDBP-218ENST00000617172 SSX7Q7RTT5 188 aa6.75□□□□□ -1.33
TARDBP-218ENST00000617172 ATP5SQ99766 215 aa6.75□□□□□ -1.33
TARDBP-218ENST00000617172 Q9H8V8 135 aa6.75□□□□□ -1.33
TARDBP-218ENST00000617172 GSN-AS1Q9NRJ2 163 aa6.75□□□□□ -1.33
TARDBP-218ENST00000617172 ZNF492Q9P255 531 aa6.75□□□□□ -1.33
TARDBP-218ENST00000617172 LINC00588Q9Y4M8 146 aa6.75□□□□□ -1.33
TARDBP-218ENST00000617172 RBAKDNA6NC62 111 aa6.74□□□□□ -1.33
TARDBP-218ENST00000617172 RGS13O14921 159 aa6.74□□□□□ -1.33
TARDBP-218ENST00000617172 OR7C2O60412 319 aa6.74□□□□□ -1.33
TARDBP-218ENST00000617172 MPC2O95563 127 aa6.74□□□□□ -1.33
TARDBP-218ENST00000617172 OR10J4P0C629 311 aa6.74□□□□□ -1.33
TARDBP-218ENST00000617172 RPL12P30050 165 aaKnown RBP6.74□□□□□ -1.33
TARDBP-218ENST00000617172 ZNF138P52744 262 aa6.74□□□□□ -1.33
TARDBP-218ENST00000617172 TCL1AP56279 114 aa6.74□□□□□ -1.33
TARDBP-218ENST00000617172 CD300CQ08708 224 aa6.74□□□□□ -1.33
TARDBP-218ENST00000617172 BTN1A1Q13410 526 aa6.74□□□□□ -1.33
TARDBP-218ENST00000617172 LINC01559Q495D7 138 aa6.74□□□□□ -1.33
TARDBP-218ENST00000617172 TTC32Q5I0X7 151 aa6.74□□□□□ -1.33
TARDBP-218ENST00000617172 IBA57Q5T440 356 aaKnown RBP6.74□□□□□ -1.33
TARDBP-218ENST00000617172 Q6ZTI0 123 aa6.74□□□□□ -1.33
TARDBP-218ENST00000617172 C6orf223Q8N319 242 aa6.74□□□□□ -1.33
TARDBP-218ENST00000617172 FXYD5Q96DB9 178 aa6.74□□□□□ -1.33
TARDBP-218ENST00000617172 HSPB11Q9Y547 144 aa6.74□□□□□ -1.33
TARDBP-218ENST00000617172 IGHV1OR15-1A0A075B7D0 117 aa6.73□□□□□ -1.33
TARDBP-218ENST00000617172 IGKV2-40A0A087WW87 121 aaPredicted RBP6.73□□□□□ -1.33
TARDBP-218ENST00000617172 A0A0J9YY99 117 aa6.73□□□□□ -1.33
TARDBP-218ENST00000617172 IGKV2D-40P01614 121 aaPredicted RBP6.73□□□□□ -1.33
TARDBP-218ENST00000617172 BTF3P20290 206 aaKnown RBP6.73□□□□□ -1.33
TARDBP-218ENST00000617172 HOXA5P20719 270 aa6.73□□□□□ -1.33
TARDBP-218ENST00000617172 RANP62826 216 aaKnown RBP6.73□□□□□ -1.33
TARDBP-218ENST00000617172 SLAQ13239 276 aa6.73□□□□□ -1.33
TARDBP-218ENST00000617172 KHDC3LQ587J8 217 aa6.73□□□□□ -1.33
TARDBP-218ENST00000617172 FFAR4Q5NUL3 377 aa6.73□□□□□ -1.33
TARDBP-218ENST00000617172 ZFAND2AQ8N6M9 145 aa6.73□□□□□ -1.33
TARDBP-218ENST00000617172 C11orf72Q8NBR9 251 aa6.73□□□□□ -1.33
TARDBP-218ENST00000617172 VGLL1Q99990 258 aa6.73□□□□□ -1.33
TARDBP-218ENST00000617172 UPK3BQ9BT76 320 aa6.73□□□□□ -1.33
TARDBP-218ENST00000617172 BATF3Q9NR55 127 aa6.73□□□□□ -1.33
TARDBP-218ENST00000617172 LENEPQ9Y5L5 61 aa6.73□□□□□ -1.33
TARDBP-218ENST00000617172 HECTD4Q9Y4D8 3996 aa6.72□□□□□ -1.33
TARDBP-218ENST00000617172 TRGV1A0A0A0MS02 117 aa6.72□□□□□ -1.33
TARDBP-218ENST00000617172 A0A1W2PPQ1 181 aa6.72□□□□□ -1.33
TARDBP-218ENST00000617172 SPINK4O60575 86 aa6.72□□□□□ -1.33
TARDBP-218ENST00000617172 UBE2L3P68036 154 aaKnown RBP6.72□□□□□ -1.33
TARDBP-218ENST00000617172 FAM74A1Q5RGS3 127 aa6.72□□□□□ -1.33
TARDBP-218ENST00000617172 ARL6IP6Q8N6S5 226 aa6.72□□□□□ -1.33
TARDBP-218ENST00000617172 ARPC5LQ9BPX5 153 aa6.72□□□□□ -1.33
TARDBP-218ENST00000617172 Q9H3A6 140 aa6.72□□□□□ -1.33
TARDBP-218ENST00000617172 TMPRSS5Q9H3S3 457 aa6.72□□□□□ -1.33
TARDBP-218ENST00000617172 KLF12Q9Y4X4 402 aa6.72□□□□□ -1.33
TARDBP-218ENST00000617172 DNAH10Q8IVF4 4471 aa6.72□□□□□ -1.33
TARDBP-218ENST00000617172 A0A1W2PPV4 95 aa6.71□□□□□ -1.34
TARDBP-218ENST00000617172 ZNF266Q14584 549 aa6.71□□□□□ -1.34
TARDBP-218ENST00000617172 ESRGQ1W209 222 aa6.71□□□□□ -1.34
TARDBP-218ENST00000617172 ACOT6Q3I5F7 207 aaPredicted RBP6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms