RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 ACYP1P07311 99 aa3.15□□□□□ -1.91
HMGB1P50-201ENST00000605814 LGALS1P09382 135 aaKnown RBP3.15□□□□□ -1.91
HMGB1P50-201ENST00000605814 IGLC6P0CF74 106 aa3.15□□□□□ -1.91
HMGB1P50-201ENST00000605814 SLC25A16P16260 332 aa3.15□□□□□ -1.91
HMGB1P50-201ENST00000605814 HLA-DMBP28068 263 aa3.15□□□□□ -1.91
HMGB1P50-201ENST00000605814 PPIFP30405 207 aaKnown RBP3.15□□□□□ -1.91
HMGB1P50-201ENST00000605814 CKS2P33552 79 aa3.15□□□□□ -1.91
HMGB1P50-201ENST00000605814 ID1P41134 155 aa3.15□□□□□ -1.91
HMGB1P50-201ENST00000605814 PSMB2P49721 201 aa3.15□□□□□ -1.91
HMGB1P50-201ENST00000605814 CRIP1P50238 77 aa3.15□□□□□ -1.91
HMGB1P50-201ENST00000605814 ZNF134P52741 427 aa3.15□□□□□ -1.91
HMGB1P50-201ENST00000605814 GNG5P63218 68 aa3.15□□□□□ -1.91
HMGB1P50-201ENST00000605814 TNFAIP6P98066 277 aaPredicted RBP3.15□□□□□ -1.91
HMGB1P50-201ENST00000605814 EBI3Q14213 229 aa3.15□□□□□ -1.91
HMGB1P50-201ENST00000605814 TMEM240Q5SV17 173 aa3.15□□□□□ -1.91
HMGB1P50-201ENST00000605814 TEX36Q5VZQ5 186 aa3.15□□□□□ -1.91
HMGB1P50-201ENST00000605814 FAM53AQ6NSI3 398 aaPredicted RBP3.15□□□□□ -1.91
HMGB1P50-201ENST00000605814 FAM159AQ6UWV7 190 aa3.15□□□□□ -1.91
HMGB1P50-201ENST00000605814 ZFP2Q6ZN57 461 aa3.15□□□□□ -1.91
HMGB1P50-201ENST00000605814 LINC00305Q7Z4B0 112 aa3.15□□□□□ -1.91
HMGB1P50-201ENST00000605814 GTSCR1Q86UQ5 136 aa3.15□□□□□ -1.91
HMGB1P50-201ENST00000605814 NDUFA11Q86Y39 141 aa3.15□□□□□ -1.91
HMGB1P50-201ENST00000605814 UBALD1Q8TB05 177 aa3.15□□□□□ -1.91
HMGB1P50-201ENST00000605814 TMEM167AQ8TBQ9 72 aa3.15□□□□□ -1.91
HMGB1P50-201ENST00000605814 BAALCQ8WXS3 180 aa3.15□□□□□ -1.91
HMGB1P50-201ENST00000605814 NPIPB3Q92617 1050 aa3.15□□□□□ -1.91
HMGB1P50-201ENST00000605814 RNF185Q96GF1 192 aa3.15□□□□□ -1.91
HMGB1P50-201ENST00000605814 ODF3Q96PU9 254 aa3.15□□□□□ -1.91
HMGB1P50-201ENST00000605814 MRPL20Q9BYC9 149 aaKnown RBP3.15□□□□□ -1.91
HMGB1P50-201ENST00000605814 BRWD1Q9NSI6 2320 aa3.15□□□□□ -1.91
HMGB1P50-201ENST00000605814 KNL1Q8NG31 2342 aa3.14□□□□□ -1.91
HMGB1P50-201ENST00000605814 PCNTO95613 3336 aa3.14□□□□□ -1.91
HMGB1P50-201ENST00000605814 F5P12259 2224 aa3.14□□□□□ -1.91
HMGB1P50-201ENST00000605814 ASCC3Q8N3C0 2202 aaKnown RBP3.14□□□□□ -1.91
HMGB1P50-201ENST00000605814 IGHV3OR15-7A0A075B7D8 119 aa3.14□□□□□ -1.91
HMGB1P50-201ENST00000605814 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.14□□□□□ -1.91
HMGB1P50-201ENST00000605814 TRAV40A0A0B4J280 105 aa3.14□□□□□ -1.91
HMGB1P50-201ENST00000605814 LOC389332A0A1B0GUA5 103 aa3.14□□□□□ -1.91
HMGB1P50-201ENST00000605814 F8VRH5 84 aa3.14□□□□□ -1.91
HMGB1P50-201ENST00000605814 LGALS9O00182 355 aa3.14□□□□□ -1.91
HMGB1P50-201ENST00000605814 UQCRQO14949 82 aa3.14□□□□□ -1.91
HMGB1P50-201ENST00000605814 SLC25A20O43772 301 aa3.14□□□□□ -1.91
HMGB1P50-201ENST00000605814 DUX1O43812 170 aa3.14□□□□□ -1.91
HMGB1P50-201ENST00000605814 TCL1BO95988 128 aa3.14□□□□□ -1.91
HMGB1P50-201ENST00000605814 MT-CO3P00414 261 aa3.14□□□□□ -1.91
HMGB1P50-201ENST00000605814 CRYGBP07316 175 aa3.14□□□□□ -1.91
HMGB1P50-201ENST00000605814 CCL3P10147 92 aa3.14□□□□□ -1.91
HMGB1P50-201ENST00000605814 COX6B1P14854 86 aa3.14□□□□□ -1.91
HMGB1P50-201ENST00000605814 PRDX2P32119 198 aa3.14□□□□□ -1.91
HMGB1P50-201ENST00000605814 LEPP41159 167 aa3.14□□□□□ -1.91
HMGB1P50-201ENST00000605814 SSR4P51571 173 aa3.14□□□□□ -1.91
HMGB1P50-201ENST00000605814 ATP5J2P56134 94 aa3.14□□□□□ -1.91
HMGB1P50-201ENST00000605814 TFF2Q03403 129 aa3.14□□□□□ -1.91
HMGB1P50-201ENST00000605814 PAPPA-AS1Q5QFB9 102 aa3.14□□□□□ -1.91
HMGB1P50-201ENST00000605814 LYZL1Q6UWQ5 148 aa3.14□□□□□ -1.91
HMGB1P50-201ENST00000605814 SDIM1Q6ZPB5 146 aa3.14□□□□□ -1.91
HMGB1P50-201ENST00000605814 VKORC1L1Q8N0U8 176 aa3.14□□□□□ -1.91
HMGB1P50-201ENST00000605814 C10orf126Q8N4M7 172 aa3.14□□□□□ -1.91
HMGB1P50-201ENST00000605814 C3orf22Q8N5N4 141 aa3.14□□□□□ -1.91
HMGB1P50-201ENST00000605814 ANKRD29Q8N6D5 301 aa3.14□□□□□ -1.91
HMGB1P50-201ENST00000605814 OR13C6PQ8NH95 151 aa3.14□□□□□ -1.91
HMGB1P50-201ENST00000605814 SPATA3Q8NHX4 192 aa3.14□□□□□ -1.91
HMGB1P50-201ENST00000605814 LINC00526Q96FQ7 95 aa3.14□□□□□ -1.91
HMGB1P50-201ENST00000605814 KIR2DL4Q99706 377 aa3.14□□□□□ -1.91
HMGB1P50-201ENST00000605814 FOXC2Q99958 501 aa3.14□□□□□ -1.91
HMGB1P50-201ENST00000605814 TPPP3Q9BW30 176 aa3.14□□□□□ -1.91
HMGB1P50-201ENST00000605814 AAMDCQ9H7C9 122 aa3.14□□□□□ -1.91
HMGB1P50-201ENST00000605814 MRPL35Q9NZE8 188 aaKnown RBP3.14□□□□□ -1.91
HMGB1P50-201ENST00000605814 GNG12Q9UBI6 72 aa3.14□□□□□ -1.91
HMGB1P50-201ENST00000605814 CNTRLQ7Z7A1 2325 aa3.13□□□□□ -1.91
HMGB1P50-201ENST00000605814 SDK2Q58EX2 2172 aa3.13□□□□□ -1.91
HMGB1P50-201ENST00000605814 INTS1Q8N201 2190 aaKnown RBP3.13□□□□□ -1.91
HMGB1P50-201ENST00000605814 TRBV19A0A075B6N1 114 aa3.13□□□□□ -1.91
HMGB1P50-201ENST00000605814 IGHV4-4A0A075B6R2 117 aa3.13□□□□□ -1.91
HMGB1P50-201ENST00000605814 TRAV8-2A0A0B4J237 113 aa3.13□□□□□ -1.91
HMGB1P50-201ENST00000605814 TRAV8-4A0A0B4J246 113 aa3.13□□□□□ -1.91
HMGB1P50-201ENST00000605814 TRBV10-2A0A0K0K1G8 114 aa3.13□□□□□ -1.91
HMGB1P50-201ENST00000605814 DEFB108AA8MXU0 73 aa3.13□□□□□ -1.91
HMGB1P50-201ENST00000605814 J3KT08 172 aa3.13□□□□□ -1.91
HMGB1P50-201ENST00000605814 TIMM23O14925 209 aa3.13□□□□□ -1.91
HMGB1P50-201ENST00000605814 TNFRSF6BO95407 300 aa3.13□□□□□ -1.91
HMGB1P50-201ENST00000605814 CFC1BP0CG36 223 aa3.13□□□□□ -1.91
HMGB1P50-201ENST00000605814 CFC1P0CG37 223 aa3.13□□□□□ -1.91
HMGB1P50-201ENST00000605814 PF4V1P10720 104 aa3.13□□□□□ -1.91
HMGB1P50-201ENST00000605814 ORM2P19652 201 aa3.13□□□□□ -1.91
HMGB1P50-201ENST00000605814 CXCL5P42830 114 aa3.13□□□□□ -1.91
HMGB1P50-201ENST00000605814 PDE6HQ13956 83 aa3.13□□□□□ -1.91
HMGB1P50-201ENST00000605814 LAGE3Q14657 143 aa3.13□□□□□ -1.91
HMGB1P50-201ENST00000605814 PLGLAQ15195 96 aa3.13□□□□□ -1.91
HMGB1P50-201ENST00000605814 C17orf58Q2M2W7 97 aa3.13□□□□□ -1.91
HMGB1P50-201ENST00000605814 RPL39P5Q59GN2 51 aa3.13□□□□□ -1.91
HMGB1P50-201ENST00000605814 ASPHD1Q5U4P2 390 aa3.13□□□□□ -1.91
HMGB1P50-201ENST00000605814 PRNTQ86SH4 94 aa3.13□□□□□ -1.91
HMGB1P50-201ENST00000605814 TMEM219Q86XT9 240 aa3.13□□□□□ -1.91
HMGB1P50-201ENST00000605814 CD177Q8N6Q3 437 aa3.13□□□□□ -1.91
HMGB1P50-201ENST00000605814 POM121L12Q8N7R1 296 aa3.13□□□□□ -1.91
HMGB1P50-201ENST00000605814 SLC25A29Q8N8R3 303 aa3.13□□□□□ -1.91
HMGB1P50-201ENST00000605814 C8orf31Q8N9H6 132 aa3.13□□□□□ -1.91
HMGB1P50-201ENST00000605814 C15orf53Q8NAA6 179 aa3.13□□□□□ -1.91
HMGB1P50-201ENST00000605814 FAM57AQ8TBR7 257 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms