RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 C17orf100A8MU93 164 aa6.88□□□□□ -1.31
COMMD3-215ENST00000602574 SYNJ2BPP57105 145 aa6.88□□□□□ -1.31
COMMD3-215ENST00000602574 PCBD1P61457 104 aa6.88□□□□□ -1.31
COMMD3-215ENST00000602574 CD69Q07108 199 aa6.88□□□□□ -1.31
COMMD3-215ENST00000602574 MIR17HGQ75NE6 70 aa6.88□□□□□ -1.31
COMMD3-215ENST00000602574 SRXN1Q9BYN0 137 aa6.88□□□□□ -1.31
COMMD3-215ENST00000602574 SLC25A15Q9Y619 301 aa6.88□□□□□ -1.31
COMMD3-215ENST00000602574 CLPSP04118 112 aa6.87□□□□□ -1.31
COMMD3-215ENST00000602574 CFC1BP0CG36 223 aa6.87□□□□□ -1.31
COMMD3-215ENST00000602574 CFC1P0CG37 223 aa6.87□□□□□ -1.31
COMMD3-215ENST00000602574 CFHR3Q02985 330 aa6.87□□□□□ -1.31
COMMD3-215ENST00000602574 MRPL55Q7Z7F7 128 aaKnown RBP6.87□□□□□ -1.31
COMMD3-215ENST00000602574 LYZL4Q96KX0 146 aa6.87□□□□□ -1.31
COMMD3-215ENST00000602574 NOTCH4Q99466 2003 aa6.87□□□□□ -1.31
COMMD3-215ENST00000602574 TRAV12-1A0A0B4J245 112 aa6.87□□□□□ -1.31
COMMD3-215ENST00000602574 TRBV30A0A0K0K1B3 111 aa6.87□□□□□ -1.31
COMMD3-215ENST00000602574 BUB3O43684 328 aa6.87□□□□□ -1.31
COMMD3-215ENST00000602574 IGLV2-14P01704 120 aa6.87□□□□□ -1.31
COMMD3-215ENST00000602574 DYSFO75923 2080 aa6.86□□□□□ -1.31
COMMD3-215ENST00000602574 TRAV41A0A0B4J266 112 aa6.86□□□□□ -1.31
COMMD3-215ENST00000602574 ATP5EP56381 51 aaPredicted RBP6.86□□□□□ -1.31
COMMD3-215ENST00000602574 TMEM92Q6UXU6 159 aa6.86□□□□□ -1.31
COMMD3-215ENST00000602574 ZNF329Q86UD4 541 aa6.86□□□□□ -1.31
COMMD3-215ENST00000602574 FMC1Q96HJ9 113 aa6.86□□□□□ -1.31
COMMD3-215ENST00000602574 TET1Q8NFU7 2136 aa6.86□□□□□ -1.31
COMMD3-215ENST00000602574 TRBV7-1A0A0A6YYK4 115 aa6.85□□□□□ -1.31
COMMD3-215ENST00000602574 LINC00473A8K010 186 aa6.85□□□□□ -1.31
COMMD3-215ENST00000602574 IGHV3-33P01772 117 aa6.85□□□□□ -1.31
COMMD3-215ENST00000602574 PRSS1P07477 247 aa6.85□□□□□ -1.31
COMMD3-215ENST00000602574 CFHR1Q03591 330 aa6.85□□□□□ -1.31
COMMD3-215ENST00000602574 PIGYQ3MUY2 71 aa6.85□□□□□ -1.31
COMMD3-215ENST00000602574 CD164L2Q6UWJ8 174 aa6.85□□□□□ -1.31
COMMD3-215ENST00000602574 FOXC2Q99958 501 aa6.85□□□□□ -1.31
COMMD3-215ENST00000602574 PAXXQ9BUH6 204 aa6.85□□□□□ -1.31
COMMD3-215ENST00000602574 DAZ1Q9NQZ3 744 aaKnown RBP6.85□□□□□ -1.31
COMMD3-215ENST00000602574 HEATR1Q9H583 2144 aaKnown RBP6.85□□□□□ -1.31
COMMD3-215ENST00000602574 TRBV6-1A0A0K0K1D8 114 aa6.85□□□□□ -1.31
COMMD3-215ENST00000602574 SS18L1O75177 396 aaPredicted RBP6.85□□□□□ -1.31
COMMD3-215ENST00000602574 TCRAP04437 139 aa6.85□□□□□ -1.31
COMMD3-215ENST00000602574 GATA1P15976 413 aaPredicted RBP6.85□□□□□ -1.31
COMMD3-215ENST00000602574 ZNF22P17026 224 aaPredicted RBP6.85□□□□□ -1.31
COMMD3-215ENST00000602574 FGF12P61328 243 aa6.85□□□□□ -1.31
COMMD3-215ENST00000602574 C9orf139Q6ZV77 190 aa6.85□□□□□ -1.31
COMMD3-215ENST00000602574 C1orf159Q96HA4 380 aa6.85□□□□□ -1.31
COMMD3-215ENST00000602574 CEP192Q8TEP8 1941 aa6.84□□□□□ -1.31
COMMD3-215ENST00000602574 ZNF784Q8NCA9 323 aaPredicted RBP6.84□□□□□ -1.31
COMMD3-215ENST00000602574 FGFBP3Q8TAT2 258 aa6.84□□□□□ -1.31
COMMD3-215ENST00000602574 ITLN1Q8WWA0 313 aa6.84□□□□□ -1.31
COMMD3-215ENST00000602574 TRAV40A0A0B4J280 105 aa6.84□□□□□ -1.31
COMMD3-215ENST00000602574 LINC00596Q86U02 117 aa6.84□□□□□ -1.31
COMMD3-215ENST00000602574 TDHQ8IZJ6 230 aa6.84□□□□□ -1.31
COMMD3-215ENST00000602574 DAND5Q8N907 189 aa6.84□□□□□ -1.31
COMMD3-215ENST00000602574 SMCR5Q8TEV8 140 aa6.84□□□□□ -1.31
COMMD3-215ENST00000602574 IGKV1-12A0A0C4DH73 117 aa6.83□□□□□ -1.32
COMMD3-215ENST00000602574 PLAC8L1A1L4L8 177 aa6.83□□□□□ -1.32
COMMD3-215ENST00000602574 D6R8Y8 96 aa6.83□□□□□ -1.32
COMMD3-215ENST00000602574 H7C423 109 aa6.83□□□□□ -1.32
COMMD3-215ENST00000602574 IGKV1D-12P01611 117 aa6.83□□□□□ -1.32
COMMD3-215ENST00000602574 LINC00271P0C7V0 271 aa6.83□□□□□ -1.32
COMMD3-215ENST00000602574 DAZAP2Q15038 168 aaPredicted RBP6.83□□□□□ -1.32
COMMD3-215ENST00000602574 SFTA2Q6UW10 78 aa6.83□□□□□ -1.32
COMMD3-215ENST00000602574 MKXQ8IYA7 352 aa6.83□□□□□ -1.32
COMMD3-215ENST00000602574 CD177Q8N6Q3 437 aa6.83□□□□□ -1.32
COMMD3-215ENST00000602574 TSACCQ96A04 125 aaPredicted RBP6.83□□□□□ -1.32
COMMD3-215ENST00000602574 C17orf77Q96MU5 243 aa6.83□□□□□ -1.32
COMMD3-215ENST00000602574 TMEM243Q9BU79 118 aa6.83□□□□□ -1.32
COMMD3-215ENST00000602574 Q9UF83 564 aa6.83□□□□□ -1.32
COMMD3-215ENST00000602574 TRGV8A0A0C4DH27 118 aa6.83□□□□□ -1.32
COMMD3-215ENST00000602574 IGHV3-30P01768 117 aa6.83□□□□□ -1.32
COMMD3-215ENST00000602574 IGKV3-11P04433 115 aa6.83□□□□□ -1.32
COMMD3-215ENST00000602574 IGHV3-30-5P0DP03 117 aa6.83□□□□□ -1.32
COMMD3-215ENST00000602574 COX6B1P14854 86 aa6.83□□□□□ -1.32
COMMD3-215ENST00000602574 FHL2Q14192 279 aa6.83□□□□□ -1.32
COMMD3-215ENST00000602574 MRPL35Q9NZE8 188 aaKnown RBP6.83□□□□□ -1.32
COMMD3-215ENST00000602574 ARID1BQ8NFD5 2236 aaPredicted RBP6.82□□□□□ -1.32
COMMD3-215ENST00000602574 TNRC6BQ9UPQ9 1833 aaKnown RBP6.82□□□□□ -1.32
COMMD3-215ENST00000602574 TRBV19A0A075B6N1 114 aa6.82□□□□□ -1.32
COMMD3-215ENST00000602574 IGKV1-27A0A075B6S5 117 aa6.82□□□□□ -1.32
COMMD3-215ENST00000602574 IGKV1D-43A0A0B4J1Z2 117 aa6.82□□□□□ -1.32
COMMD3-215ENST00000602574 F8VRH5 84 aa6.82□□□□□ -1.32
COMMD3-215ENST00000602574 GP9P14770 177 aa6.82□□□□□ -1.32
COMMD3-215ENST00000602574 MRPL53Q96EL3 112 aaKnown RBP6.82□□□□□ -1.32
COMMD3-215ENST00000602574 FSCN3Q9NQT6 498 aa6.82□□□□□ -1.32
COMMD3-215ENST00000602574 EML6Q6ZMW3 1958 aa6.82□□□□□ -1.32
COMMD3-215ENST00000602574 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.81□□□□□ -1.32
COMMD3-215ENST00000602574 BCE1O60756 84 aa6.81□□□□□ -1.32
COMMD3-215ENST00000602574 TMEM263Q8WUH6 116 aaKnown RBP6.81□□□□□ -1.32
COMMD3-215ENST00000602574 SRSF12Q8WXF0 261 aaKnown RBP6.81□□□□□ -1.32
COMMD3-215ENST00000602574 ZNF799Q96GE5 643 aa6.81□□□□□ -1.32
COMMD3-215ENST00000602574 EMC6Q9BV81 110 aa6.81□□□□□ -1.32
COMMD3-215ENST00000602574 NGFP01138 241 aa6.81□□□□□ -1.32
COMMD3-215ENST00000602574 EIF4EBP1Q13541 118 aaPredicted RBP6.81□□□□□ -1.32
COMMD3-215ENST00000602574 KHDC1LQ5JSQ8 128 aa6.81□□□□□ -1.32
COMMD3-215ENST00000602574 Q6JHZ5 121 aa6.81□□□□□ -1.32
COMMD3-215ENST00000602574 FAM167A-AS1Q96KT0 104 aa6.81□□□□□ -1.32
COMMD3-215ENST00000602574 S1PR3Q99500 378 aa6.81□□□□□ -1.32
COMMD3-215ENST00000602574 ADAMTS20P59510 1910 aa6.81□□□□□ -1.32
COMMD3-215ENST00000602574 IGKV3D-11A0A0A0MRZ8 115 aa6.8□□□□□ -1.32
COMMD3-215ENST00000602574 A0A0J9YY99 117 aa6.8□□□□□ -1.32
COMMD3-215ENST00000602574 LOC389332A0A1B0GUA5 103 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms