RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 IGFL4Q6B9Z1 124 aa13.4□□□□□ -0.27
SHKBP1-224ENST00000600718 LCN12Q6JVE5 192 aa13.4□□□□□ -0.27
SHKBP1-224ENST00000600718 C11orf44Q8N8P7 122 aa13.4□□□□□ -0.27
SHKBP1-224ENST00000600718 MRPL53Q96EL3 112 aaKnown RBP13.4□□□□□ -0.27
SHKBP1-224ENST00000600718 SGK494Q96LW2 274 aa13.4□□□□□ -0.27
SHKBP1-224ENST00000600718 TRAV8-2A0A0B4J237 113 aa13.39□□□□□ -0.27
SHKBP1-224ENST00000600718 H7BYZ3 331 aa13.39□□□□□ -0.27
SHKBP1-224ENST00000600718 TCAPO15273 167 aa13.39□□□□□ -0.27
SHKBP1-224ENST00000600718 IGLV2-11P01706 119 aa13.39□□□□□ -0.27
SHKBP1-224ENST00000600718 EDN2P20800 178 aa13.39□□□□□ -0.27
SHKBP1-224ENST00000600718 CBLN1P23435 193 aa13.39□□□□□ -0.27
SHKBP1-224ENST00000600718 HLA-DMBP28068 263 aa13.39□□□□□ -0.27
SHKBP1-224ENST00000600718 FAM3BP58499 235 aaPredicted RBP13.39□□□□□ -0.27
SHKBP1-224ENST00000600718 RPL11P62913 178 aaKnown RBP13.39□□□□□ -0.27
SHKBP1-224ENST00000600718 PSG3Q16557 428 aa13.39□□□□□ -0.27
SHKBP1-224ENST00000600718 TCF24Q7RTU0 167 aa13.39□□□□□ -0.27
SHKBP1-224ENST00000600718 C16orf92Q96LL3 132 aa13.39□□□□□ -0.27
SHKBP1-224ENST00000600718 NRN1Q9NPD7 142 aa13.39□□□□□ -0.27
SHKBP1-224ENST00000600718 XKRY2A2RUG3 117 aa13.38□□□□□ -0.27
SHKBP1-224ENST00000600718 FBLL1A6NHQ2 334 aaKnown RBP13.38□□□□□ -0.27
SHKBP1-224ENST00000600718 C2orf70A6NJV1 201 aa13.38□□□□□ -0.27
SHKBP1-224ENST00000600718 MGST1P10620 155 aaKnown RBP13.38□□□□□ -0.27
SHKBP1-224ENST00000600718 OR10G8Q8NGN5 311 aa13.38□□□□□ -0.27
SHKBP1-224ENST00000600718 PEMTQ9UBM1 199 aa13.38□□□□□ -0.27
SHKBP1-224ENST00000600718 A0A1B0GUS0 222 aa13.38□□□□□ -0.27
SHKBP1-224ENST00000600718 M0QZ24 198 aa13.38□□□□□ -0.27
SHKBP1-224ENST00000600718 OR5I1Q13606 314 aa13.38□□□□□ -0.27
SHKBP1-224ENST00000600718 MLST8Q9BVC4 326 aa13.38□□□□□ -0.27
SHKBP1-224ENST00000600718 PSG8Q9UQ74 426 aa13.38□□□□□ -0.27
SHKBP1-224ENST00000600718 TRAV8-1A0A0A6YYK1 113 aa13.37□□□□□ -0.27
SHKBP1-224ENST00000600718 SAMD13Q5VXD3 122 aa13.37□□□□□ -0.27
SHKBP1-224ENST00000600718 PRNTQ86SH4 94 aa13.37□□□□□ -0.27
SHKBP1-224ENST00000600718 Q86TA4 180 aa13.37□□□□□ -0.27
SHKBP1-224ENST00000600718 RNF182Q8N6D2 247 aa13.37□□□□□ -0.27
SHKBP1-224ENST00000600718 RAX2Q96IS3 184 aa13.37□□□□□ -0.27
SHKBP1-224ENST00000600718 DUX3Q96PT4 197 aa13.37□□□□□ -0.27
SHKBP1-224ENST00000600718 ZFP30Q9Y2G7 519 aa13.37□□□□□ -0.27
SHKBP1-224ENST00000600718 HIVEP1P15822 2718 aa13.37□□□□□ -0.27
SHKBP1-224ENST00000600718 A0A1W2PRX2 142 aa13.36□□□□□ -0.27
SHKBP1-224ENST00000600718 ZNF705FA8MVS1 300 aaPredicted RBP13.36□□□□□ -0.27
SHKBP1-224ENST00000600718 SOCS3O14543 225 aa13.36□□□□□ -0.27
SHKBP1-224ENST00000600718 ERVFC1-1P60608 527 aa13.36□□□□□ -0.27
SHKBP1-224ENST00000600718 HIST2H2BDQ6DRA6 164 aa13.36□□□□□ -0.27
SHKBP1-224ENST00000600718 NHLRC2Q8NBF2 726 aa13.36□□□□□ -0.27
SHKBP1-224ENST00000600718 TMEM18Q96B42 140 aa13.36□□□□□ -0.27
SHKBP1-224ENST00000600718 OSTCQ9NRP0 149 aa13.36□□□□□ -0.27
SHKBP1-224ENST00000600718 CCL24O00175 119 aa13.36□□□□□ -0.27
SHKBP1-224ENST00000600718 SRSF2Q01130 221 aaKnown RBP13.36□□□□□ -0.27
SHKBP1-224ENST00000600718 OR9G4Q8NGQ1 327 aa13.36□□□□□ -0.27
SHKBP1-224ENST00000600718 DLX4Q92988 240 aaPredicted RBP13.36□□□□□ -0.27
SHKBP1-224ENST00000600718 IGKV2-40A0A087WW87 121 aaPredicted RBP13.35□□□□□ -0.27
SHKBP1-224ENST00000600718 RBAKDNA6NC62 111 aa13.35□□□□□ -0.27
SHKBP1-224ENST00000600718 CYSRT1A8MQ03 144 aa13.35□□□□□ -0.27
SHKBP1-224ENST00000600718 IGKV2D-40P01614 121 aaPredicted RBP13.35□□□□□ -0.27
SHKBP1-224ENST00000600718 TYMSP04818 313 aa13.35□□□□□ -0.27
SHKBP1-224ENST00000600718 FHL3Q13643 280 aa13.35□□□□□ -0.27
SHKBP1-224ENST00000600718 IQCJQ1A5X6 159 aa13.35□□□□□ -0.27
SHKBP1-224ENST00000600718 ACTL10Q5JWF8 245 aa13.35□□□□□ -0.27
SHKBP1-224ENST00000600718 MTORP42345 2549 aa13.35□□□□□ -0.27
SHKBP1-224ENST00000600718 ZNF705GA8MUZ8 300 aaPredicted RBP13.34□□□□□ -0.27
SHKBP1-224ENST00000600718 FOXL1Q12952 345 aa13.34□□□□□ -0.27
SHKBP1-224ENST00000600718 FAM231DQ6ZW35 169 aa13.34□□□□□ -0.27
SHKBP1-224ENST00000600718 IMMP2LQ96T52 175 aa13.34□□□□□ -0.27
SHKBP1-224ENST00000600718 IGKV3-7A0A075B6H7 116 aa13.33□□□□□ -0.28
SHKBP1-224ENST00000600718 ID1P41134 155 aa13.33□□□□□ -0.28
SHKBP1-224ENST00000600718 IBA57Q5T440 356 aaKnown RBP13.33□□□□□ -0.28
SHKBP1-224ENST00000600718 ADAMTSL5Q6ZMM2 481 aa13.33□□□□□ -0.28
SHKBP1-224ENST00000600718 RNASE7Q9H1E1 156 aaKnown RBP13.33□□□□□ -0.28
SHKBP1-224ENST00000600718 PRAC2D3DTV9 90 aa13.32□□□□□ -0.28
SHKBP1-224ENST00000600718 PRB4P10163 310 aaPredicted RBP13.32□□□□□ -0.28
SHKBP1-224ENST00000600718 SAPCD1Q5SSQ6 148 aa13.32□□□□□ -0.28
SHKBP1-224ENST00000600718 VGLL1Q99990 258 aa13.32□□□□□ -0.28
SHKBP1-224ENST00000600718 FLNBO75369 2602 aaKnown RBP13.32□□□□□ -0.28
SHKBP1-224ENST00000600718 CSN3P07498 182 aa13.32□□□□□ -0.28
SHKBP1-224ENST00000600718 ZNF738Q8NE65 137 aa13.32□□□□□ -0.28
SHKBP1-224ENST00000600718 DCANP1Q8TF63 244 aa13.32□□□□□ -0.28
SHKBP1-224ENST00000600718 C20orf173Q96LM9 149 aa13.32□□□□□ -0.28
SHKBP1-224ENST00000600718 MS4A6AQ9H2W1 248 aa13.32□□□□□ -0.28
SHKBP1-224ENST00000600718 ZNF492Q9P255 531 aa13.32□□□□□ -0.28
SHKBP1-224ENST00000600718 SELENOKQ9Y6D0 94 aa13.32□□□□□ -0.28
SHKBP1-224ENST00000600718 V9GYV3 84 aa13.32□□□□□ -0.28
SHKBP1-224ENST00000600718 FN1P02751 2386 aaKnown RBP13.31□□□□□ -0.28
SHKBP1-224ENST00000600718 EREGO14944 169 aa13.31□□□□□ -0.28
SHKBP1-224ENST00000600718 PRR27Q6MZM9 219 aa13.31□□□□□ -0.28
SHKBP1-224ENST00000600718 GBGT1Q8N5D6 347 aa13.31□□□□□ -0.28
SHKBP1-224ENST00000600718 BTF3L4Q96K17 158 aa13.31□□□□□ -0.28
SHKBP1-224ENST00000600718 CUBNO60494 3623 aa13.31□□□□□ -0.28
SHKBP1-224ENST00000600718 ADARB2-AS1A8MUL3 147 aa13.31□□□□□ -0.28
SHKBP1-224ENST00000600718 OVOL1O14753 267 aa13.31□□□□□ -0.28
SHKBP1-224ENST00000600718 KCNIP4Q6PIL6 250 aa13.31□□□□□ -0.28
SHKBP1-224ENST00000600718 NDUFA11Q86Y39 141 aa13.31□□□□□ -0.28
SHKBP1-224ENST00000600718 NUDT10Q8NFP7 164 aa13.31□□□□□ -0.28
SHKBP1-224ENST00000600718 NUDT11Q96G61 164 aa13.31□□□□□ -0.28
SHKBP1-224ENST00000600718 BAHCC1Q9P281 2608 aa13.3□□□□□ -0.28
SHKBP1-224ENST00000600718 A0A1W2PPQ1 181 aa13.3□□□□□ -0.28
SHKBP1-224ENST00000600718 KRTAP10-3P60369 221 aa13.3□□□□□ -0.28
SHKBP1-224ENST00000600718 PAFAH1B2P68402 229 aa13.3□□□□□ -0.28
SHKBP1-224ENST00000600718 ERCC8Q13216 396 aa13.3□□□□□ -0.28
SHKBP1-224ENST00000600718 COX8CQ7Z4L0 72 aa13.3□□□□□ -0.28
SHKBP1-224ENST00000600718 WFDC3Q8IUB2 231 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms