RNA–Protein interactions for RNA: ENST00000598159.6

SSBP4-205, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 747 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-205ENST00000598159 HSPB11Q9Y547 144 aa16.15■□□□□ 0.18
SSBP4-205ENST00000598159 NACAE9PAV3 2078 aa16.15■□□□□ 0.18
SSBP4-205ENST00000598159 C7orf71A4D174 169 aa16.14■□□□□ 0.17
SSBP4-205ENST00000598159 NUDT3O95989 172 aa16.14■□□□□ 0.17
SSBP4-205ENST00000598159 RNF141Q8WVD5 230 aa16.14■□□□□ 0.17
SSBP4-205ENST00000598159 KLLNB2CW77 178 aa16.13■□□□□ 0.17
SSBP4-205ENST00000598159 RTL8CO15255 209 aa16.13■□□□□ 0.17
SSBP4-205ENST00000598159 ZNF324O75467 553 aaPredicted RBP16.13■□□□□ 0.17
SSBP4-205ENST00000598159 NMBP08949 121 aa16.13■□□□□ 0.17
SSBP4-205ENST00000598159 SCGB1C1Q8TD33 95 aa16.13■□□□□ 0.17
SSBP4-205ENST00000598159 PRSS29PA6NIE9 313 aa16.12■□□□□ 0.17
SSBP4-205ENST00000598159 IFNA5P01569 189 aa16.12■□□□□ 0.17
SSBP4-205ENST00000598159 CRISP2P16562 243 aa16.12■□□□□ 0.17
SSBP4-205ENST00000598159 RPL12P30050 165 aaKnown RBP16.12■□□□□ 0.17
SSBP4-205ENST00000598159 DAZ2Q13117 558 aaKnown RBP16.12■□□□□ 0.17
SSBP4-205ENST00000598159 TMEM78Q5T7P6 136 aa16.12■□□□□ 0.17
SSBP4-205ENST00000598159 FAM122CQ6P4D5 195 aa16.12■□□□□ 0.17
SSBP4-205ENST00000598159 FXYD5Q96DB9 178 aa16.12■□□□□ 0.17
SSBP4-205ENST00000598159 LINC00467Q9BRT7 94 aa16.12■□□□□ 0.17
SSBP4-205ENST00000598159 HECTD4Q9Y4D8 3996 aa16.12■□□□□ 0.17
SSBP4-205ENST00000598159 GPX1P07203 203 aa16.11■□□□□ 0.17
SSBP4-205ENST00000598159 CCL18P55774 89 aa16.11■□□□□ 0.17
SSBP4-205ENST00000598159 SOHLH1Q5JUK2 328 aa16.11■□□□□ 0.17
SSBP4-205ENST00000598159 LYPD1Q8N2G4 141 aa16.11■□□□□ 0.17
SSBP4-205ENST00000598159 GAGE12BA1L429 117 aa16.1■□□□□ 0.17
SSBP4-205ENST00000598159 GAGE7O76087 117 aa16.1■□□□□ 0.17
SSBP4-205ENST00000598159 OR10J4P0C629 311 aa16.1■□□□□ 0.17
SSBP4-205ENST00000598159 GAGE12FP0CL80 117 aa16.1■□□□□ 0.17
SSBP4-205ENST00000598159 GAGE12GP0CL81 117 aa16.1■□□□□ 0.17
SSBP4-205ENST00000598159 GAGE12IP0CL82 117 aa16.1■□□□□ 0.17
SSBP4-205ENST00000598159 RNASE4P34096 147 aaKnown RBP16.1■□□□□ 0.17
SSBP4-205ENST00000598159 CD300CQ08708 224 aa16.1■□□□□ 0.17
SSBP4-205ENST00000598159 OR5I1Q13606 314 aa16.1■□□□□ 0.17
SSBP4-205ENST00000598159 FFAR4Q5NUL3 377 aa16.1■□□□□ 0.17
SSBP4-205ENST00000598159 ZNF680Q8NEM1 530 aa16.1■□□□□ 0.17
SSBP4-205ENST00000598159 A0A1B0GVY2 172 aa16.09■□□□□ 0.17
SSBP4-205ENST00000598159 OR7C2O60412 319 aa16.09■□□□□ 0.17
SSBP4-205ENST00000598159 ANXA2RQ3ZCQ2 193 aa16.09■□□□□ 0.17
SSBP4-205ENST00000598159 EIF4E3Q8N5X7 224 aaKnown RBP16.09■□□□□ 0.17
SSBP4-205ENST00000598159 VGLL1Q99990 258 aa16.09■□□□□ 0.17
SSBP4-205ENST00000598159 ZNF492Q9P255 531 aa16.09■□□□□ 0.17
SSBP4-205ENST00000598159 MBD2Q9UBB5 411 aa16.09■□□□□ 0.17
SSBP4-205ENST00000598159 IGKV2-40A0A087WW87 121 aaPredicted RBP16.08■□□□□ 0.16
SSBP4-205ENST00000598159 IGKV2D-40P01614 121 aaPredicted RBP16.08■□□□□ 0.16
SSBP4-205ENST00000598159 CSN1S1P47710 185 aa16.08■□□□□ 0.16
SSBP4-205ENST00000598159 TAS2R45P59539 299 aa16.08■□□□□ 0.16
SSBP4-205ENST00000598159 BTN1A1Q13410 526 aa16.08■□□□□ 0.16
SSBP4-205ENST00000598159 GNPNAT1Q96EK6 184 aaPredicted RBP16.08■□□□□ 0.16
SSBP4-205ENST00000598159 ZNF503Q96F45 646 aa16.08■□□□□ 0.16
SSBP4-205ENST00000598159 SMIM3Q9BZL3 60 aa16.08■□□□□ 0.16
SSBP4-205ENST00000598159 TRBV7-9A0A0J9YWB2 115 aa16.07■□□□□ 0.16
SSBP4-205ENST00000598159 M6PRP20645 277 aa16.07■□□□□ 0.16
SSBP4-205ENST00000598159 RANP62826 216 aaKnown RBP16.07■□□□□ 0.16
SSBP4-205ENST00000598159 C1orf134Q5TEV5 83 aa16.07■□□□□ 0.16
SSBP4-205ENST00000598159 GSN-AS1Q9NRJ2 163 aa16.07■□□□□ 0.16
SSBP4-205ENST00000598159 TRAV26-1A0A087WT03 109 aa16.06■□□□□ 0.16
SSBP4-205ENST00000598159 RBAKDNA6NC62 111 aa16.06■□□□□ 0.16
SSBP4-205ENST00000598159 H3BNG1 76 aa16.06■□□□□ 0.16
SSBP4-205ENST00000598159 ZNF138P52744 262 aa16.06■□□□□ 0.16
SSBP4-205ENST00000598159 KHDC3LQ587J8 217 aa16.06■□□□□ 0.16
SSBP4-205ENST00000598159 ZFAND2AQ8N6M9 145 aa16.06■□□□□ 0.16
SSBP4-205ENST00000598159 C11orf72Q8NBR9 251 aa16.06■□□□□ 0.16
SSBP4-205ENST00000598159 ZNRF2Q8NHG8 242 aa16.06■□□□□ 0.16
SSBP4-205ENST00000598159 RXFP4Q8TDU9 374 aa16.06■□□□□ 0.16
SSBP4-205ENST00000598159 PHYHIPLQ96FC7 376 aa16.06■□□□□ 0.16
SSBP4-205ENST00000598159 HOXA5P20719 270 aa16.05■□□□□ 0.16
SSBP4-205ENST00000598159 Q6ZTI0 123 aa16.05■□□□□ 0.16
SSBP4-205ENST00000598159 C18orf15Q96N68 181 aa16.05■□□□□ 0.16
SSBP4-205ENST00000598159 Q9H3A6 140 aa16.05■□□□□ 0.16
SSBP4-205ENST00000598159 LINC00588Q9Y4M8 146 aa16.05■□□□□ 0.16
SSBP4-205ENST00000598159 RGS13O14921 159 aa16.04■□□□□ 0.16
SSBP4-205ENST00000598159 UBE2L3P68036 154 aaKnown RBP16.04■□□□□ 0.16
SSBP4-205ENST00000598159 IBA57Q5T440 356 aaKnown RBP16.04■□□□□ 0.16
SSBP4-205ENST00000598159 WFDC1Q9HC57 220 aa16.04■□□□□ 0.16
SSBP4-205ENST00000598159 TRGV2A0A075B6R0 118 aa16.03■□□□□ 0.16
SSBP4-205ENST00000598159 ACOT6Q3I5F7 207 aaPredicted RBP16.03■□□□□ 0.16
SSBP4-205ENST00000598159 SSX7Q7RTT5 188 aa16.03■□□□□ 0.16
SSBP4-205ENST00000598159 ALG5Q9Y673 324 aa16.03■□□□□ 0.16
SSBP4-205ENST00000598159 IGHV1OR15-1A0A075B7D0 117 aa16.02■□□□□ 0.16
SSBP4-205ENST00000598159 A0A0J9YY99 117 aa16.02■□□□□ 0.16
SSBP4-205ENST00000598159 NBDYA0A0U1RRE5 68 aa16.02■□□□□ 0.16
SSBP4-205ENST00000598159 A0A1W2PPV4 95 aa16.02■□□□□ 0.16
SSBP4-205ENST00000598159 TCL1AP56279 114 aa16.02■□□□□ 0.16
SSBP4-205ENST00000598159 TMPRSS5Q9H3S3 457 aa16.02■□□□□ 0.16
SSBP4-205ENST00000598159 DNAH2Q9P225 4427 aa16.01■□□□□ 0.15
SSBP4-205ENST00000598159 TRGV1A0A0A0MS02 117 aa16.01■□□□□ 0.15
SSBP4-205ENST00000598159 DIRC3C9JPN6 131 aa16.01■□□□□ 0.15
SSBP4-205ENST00000598159 SPINK4O60575 86 aa16.01■□□□□ 0.15
SSBP4-205ENST00000598159 PRR9Q5T870 116 aa16.01■□□□□ 0.15
SSBP4-205ENST00000598159 KLF12Q9Y4X4 402 aa16.01■□□□□ 0.15
SSBP4-205ENST00000598159 LENEPQ9Y5L5 61 aa16.01■□□□□ 0.15
SSBP4-205ENST00000598159 DNAH17Q9UFH2 4485 aa16.01■□□□□ 0.15
SSBP4-205ENST00000598159 FAT2Q9NYQ8 4349 aa16.01■□□□□ 0.15
SSBP4-205ENST00000598159 PTTG1O95997 202 aa16■□□□□ 0.15
SSBP4-205ENST00000598159 PQLC2Q6ZP29 291 aa16■□□□□ 0.15
SSBP4-205ENST00000598159 TP53TG3Q9ULZ0 132 aa16■□□□□ 0.15
SSBP4-205ENST00000598159 ZNF266Q14584 549 aa15.99■□□□□ 0.15
SSBP4-205ENST00000598159 FAM74A1Q5RGS3 127 aa15.99■□□□□ 0.15
SSBP4-205ENST00000598159 Q8TAT8 98 aa15.99■□□□□ 0.15
SSBP4-205ENST00000598159 ARPC5LQ9BPX5 153 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 107.7 ms